Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00272
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 428
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00272

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00272 Chr06 21699631-41102326 Chr05 87809389-105841807 mixed High 200 anchors
Chr06 21699631-41102326 Chr05 87809389-105841807 JCVI_TKOH_00272 · 428 gene pairs TkA06G112460 | LXL04_024741 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA06G112480 | LXL04_024740 | 87.1% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA06G112540 | LXL04_024739 | 96.4% | RBH_high_identity_coverage_synteny | Strict TkA06G112700 | LXL04_024738 | 99.5% | RBH_high_identity_coverage_synteny | Strict TkA06G113340 | LXL04_024736 | 75.9% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA06G113360 | LXL04_024735 | 70.2% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA06G114170 | LXL04_024732 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA06G114220 | LXL04_024731 | 94.3% | RBH_sequence_supported | Probable TkA06G114340 | LXL04_024729 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA06G114380 | LXL04_024728 | 98.4% | RBH_high_identity_coverage_synteny | Strict TkA06G114480 | LXL04_024727 | 99.5% | RBH_high_identity_coverage_synteny | Strict TkA06G114570 | LXL04_024726 | 96.1% | sequence_supported_annotation_or_model_conflict | Review
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00272 Chr06:21699631-41102326 Chr05:87809389-105841807 mixed 428 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 428 · Showing 201–400 · Page 2/3

TkA06G112460 → LXL04_024741
100.0%
TkA06G112480 → LXL04_024740
87.1%
TkA06G112540 → LXL04_024739
96.4%
TkA06G112700 → LXL04_024738
99.5%
TkA06G113340 → LXL04_024736
75.9%
TkA06G113360 → LXL04_024735
70.2%
TkA06G114170 → LXL04_024732
100.0%
TkA06G114220 → LXL04_024731
94.3%
TkA06G114340 → LXL04_024729
100.0%
TkA06G114380 → LXL04_024728
98.4%
TkA06G114480 → LXL04_024727
99.5%
TkA06G114570 → LXL04_024726
96.1%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA06G112460LXL04_024741JCVI_TKOH_00272100.0100.0 / 94.022Strict
TkA06G112480LXL04_024740JCVI_TKOH_0027287.1100.0 / 80.498Review
TkA06G112540LXL04_024739JCVI_TKOH_0027296.4100.0 / 100.0Strict
TkA06G112700LXL04_024738JCVI_TKOH_0027299.5100.0 / 100.0Strict
TkA06G113340LXL04_024736JCVI_TKOH_0027275.9100.0 / 100.0Review
TkA06G113360LXL04_024735JCVI_TKOH_0027270.2100.0 / 100.0Review
TkA06G114170LXL04_024732JCVI_TKOH_00272100.0100.0 / 100.0Strict
TkA06G114220LXL04_024731JCVI_TKOH_0027294.3100.0 / 100.0Probable
TkA06G114340LXL04_024729JCVI_TKOH_00272100.0100.0 / 100.0Strict
TkA06G114380LXL04_024728JCVI_TKOH_0027298.4100.0 / 100.0Strict
TkA06G114480LXL04_024727JCVI_TKOH_0027299.5100.0 / 100.0Strict
TkA06G114570LXL04_024726JCVI_TKOH_0027296.1100.0 / 55.91Review
TkA06G114580LXL04_024726JCVI_TKOH_00272100.0100.0 / 25.328Review
TkA06G114800LXL04_024725JCVI_TKOH_0027299.4100.0 / 58.22Review
TkA06G115030LXL04_024723JCVI_TKOH_0027299.2100.0 / 100.0Complex
TkA06G115140LXL04_024722JCVI_TKOH_0027278.598.113 / 77.547Review
TkA06G115230LXL04_024718JCVI_TKOH_0027287.278.981 / 54.864Review
TkA06G115240LXL04_024717JCVI_TKOH_0027297.781.193 / 100.0Strict
TkA06G115250LXL04_024716JCVI_TKOH_0027287.077.474 / 59.485Complex
TkA06G115300LXL04_024713JCVI_TKOH_0027295.992.353 / 69.731Complex
TkA06G115670LXL04_024711JCVI_TKOH_0027299.6100.0 / 100.0Strict
TkA06G115800LXL04_024710JCVI_TKOH_0027299.3100.0 / 100.0Strict
TkA06G115860LXL04_024709JCVI_TKOH_0027297.3100.0 / 100.0Strict
TkA06G115960LXL04_024708JCVI_TKOH_0027299.8100.0 / 64.067Review
TkA06G116390LXL04_024702JCVI_TKOH_0027259.197.285 / 80.451Complex
TkA06G116520LXL04_024704JCVI_TKOH_00272100.0100.0 / 100.0Review
TkA06G116530LXL04_024703JCVI_TKOH_0027299.199.373 / 100.0Strict
TkA06G116750LXL04_024704JCVI_TKOH_0027262.099.065 / 93.929Complex
TkA06G116770LXL04_024702JCVI_TKOH_0027280.1100.0 / 100.0Complex
TkA06G116890LXL04_024701JCVI_TKOH_0027299.4100.0 / 94.652Strict
TkA06G117000LXL04_024698JCVI_TKOH_0027295.5100.0 / 70.253Probable
TkA06G117020LXL04_024696JCVI_TKOH_0027299.7100.0 / 100.0Strict
TkA06G117170LXL04_024694JCVI_TKOH_0027299.6100.0 / 100.0Complex
TkA06G117240LXL04_024693JCVI_TKOH_00272100.0100.0 / 100.0Complex
TkA06G117270LXL04_024691JCVI_TKOH_0027299.495.411 / 94.497Strict
TkA06G117330LXL04_024690JCVI_TKOH_0027291.4100.0 / 100.0Probable
TkA06G117360LXL04_024689JCVI_TKOH_0027299.094.545 / 100.0Complex
TkA06G117370LXL04_024688JCVI_TKOH_00272100.0100.0 / 100.0Complex
TkA06G117380LXL04_024687JCVI_TKOH_0027299.1100.0 / 94.231Strict
TkA06G117400LXL04_024686JCVI_TKOH_0027299.0100.0 / 100.0Strict
TkA06G117410LXL04_024685JCVI_TKOH_0027298.6100.0 / 29.959Review
TkA06G117420LXL04_024683JCVI_TKOH_0027291.692.265 / 75.472Complex
TkA06G117460LXL04_024682JCVI_TKOH_0027299.0100.0 / 100.0Strict
TkA06G117610LXL04_024681JCVI_TKOH_0027297.5100.0 / 100.0Strict
TkA06G117630LXL04_024679JCVI_TKOH_00272100.0100.0 / 100.0Complex
TkA06G117770LXL04_024677JCVI_TKOH_0027298.4100.0 / 100.0Strict
TkA06G117950LXL04_024675JCVI_TKOH_0027299.6100.0 / 100.0Complex
TkA06G117960LXL04_024674JCVI_TKOH_00272100.0100.0 / 49.156Review
TkA06G117970LXL04_024673JCVI_TKOH_0027298.4100.0 / 100.0Strict
TkA06G118160LXL04_024671JCVI_TKOH_0027298.8100.0 / 100.0Strict
TkA06G118170LXL04_024670JCVI_TKOH_0027299.6100.0 / 100.0Strict
TkA06G118480LXL04_024669JCVI_TKOH_00272100.0100.0 / 100.0Complex
TkA06G118880LXL04_024669JCVI_TKOH_0027291.199.346 / 99.342Complex
TkA06G119250LXL04_024666JCVI_TKOH_0027270.257.339 / 59.216Review
TkA06G119280LXL04_024665JCVI_TKOH_0027299.6100.0 / 100.0Strict
TkA06G119330LXL04_024663JCVI_TKOH_0027296.5100.0 / 94.937Complex
TkA06G119430LXL04_024662JCVI_TKOH_0027273.1100.0 / 100.0Review
TkA06G119450LXL04_024661JCVI_TKOH_00272100.0100.0 / 100.0Strict
TkA06G119610LXL04_024660JCVI_TKOH_0027299.6100.0 / 100.0Strict
TkA06G119760LXL04_024659JCVI_TKOH_0027299.7100.0 / 100.0Strict
TkA06G120270LXL04_024658JCVI_TKOH_00272100.0100.0 / 100.0Complex
TkA06G120400LXL04_024656JCVI_TKOH_0027299.3100.0 / 100.0Review
TkA06G120610LXL04_024652JCVI_TKOH_0027299.896.209 / 71.479Probable
TkA06G120640LXL04_024651JCVI_TKOH_00272100.0100.0 / 95.732Strict
TkA06G120670LXL04_024650JCVI_TKOH_0027299.0100.0 / 100.0Strict
TkA06G121190LXL04_024648JCVI_TKOH_0027296.792.481 / 42.708Review
TkA06G121220LXL04_024647JCVI_TKOH_00272100.0100.0 / 100.0Complex
TkA06G121280LXL04_024646JCVI_TKOH_0027299.1100.0 / 73.312Probable
TkA06G121290LXL04_024645JCVI_TKOH_00272100.066.176 / 66.176Review
TkA06G121670LXL04_024643JCVI_TKOH_0027297.3100.0 / 100.0Strict
TkA06G121690LXL04_024642JCVI_TKOH_0027299.8100.0 / 100.0Strict
TkA06G121700LXL04_024641JCVI_TKOH_00272100.0100.0 / 100.0Review
TkA06G121710LXL04_024640JCVI_TKOH_0027296.0100.0 / 100.0Strict
TkA06G121840LXL04_024638JCVI_TKOH_0027297.0100.0 / 100.0Strict
TkA06G121870LXL04_024637JCVI_TKOH_0027297.0100.0 / 87.5Strict
TkA06G122270LXL04_024635JCVI_TKOH_0027299.8100.0 / 100.0Strict
TkA06G122880LXL04_024632JCVI_TKOH_0027270.857.77 / 34.757Review
TkA06G123210LXL04_024630JCVI_TKOH_0027297.6100.0 / 100.0Strict
TkA06G123260LXL04_024629JCVI_TKOH_0027299.1100.0 / 100.0Strict
TkA06G123270LXL04_024628JCVI_TKOH_0027298.495.328 / 100.0Complex
TkA06G123350LXL04_024625JCVI_TKOH_0027299.3100.0 / 59.073Review
TkA06G123620LXL04_024624JCVI_TKOH_0027299.391.736 / 90.113Complex
TkA06G123730LXL04_024623JCVI_TKOH_0027296.6100.0 / 88.889Complex
TkA06G123740LXL04_024622JCVI_TKOH_0027295.588.987 / 58.721Review
TkA06G123760LXL04_024621JCVI_TKOH_0027299.1100.0 / 97.531Complex
TkA06G123800LXL04_024621JCVI_TKOH_0027299.7100.0 / 100.0Complex
TkA06G124230LXL04_024619JCVI_TKOH_0027299.4100.0 / 100.0Complex
TkA06G124290LXL04_024618JCVI_TKOH_0027250.279.747 / 88.612Review
TkA06G124470LXL04_024616JCVI_TKOH_0027287.198.678 / 100.0Review
TkA06G124510LXL04_024615JCVI_TKOH_00272100.0100.0 / 98.67Complex
TkA06G125060LXL04_024613JCVI_TKOH_0027297.6100.0 / 53.312Review
TkA06G125100LXL04_024612JCVI_TKOH_0027298.6100.0 / 100.0Review
TkA06G125140LXL04_024609JCVI_TKOH_0027299.898.742 / 39.087Review
TkA06G125150LXL04_024610JCVI_TKOH_00272100.0100.0 / 100.0Strict
TkA06G125180LXL04_024609JCVI_TKOH_0027298.1100.0 / 39.17Review
TkA06G125400LXL04_024598JCVI_TKOH_0027299.498.901 / 59.801Review
TkA06G125410LXL04_024597JCVI_TKOH_00272100.073.707 / 51.976Review
TkA06G125810LXL04_024593JCVI_TKOH_00272100.098.851 / 86.0Strict
TkA06G126070LXL04_024590JCVI_TKOH_0027277.894.161 / 54.296Complex
TkA06G126480LXL04_024588JCVI_TKOH_0027296.191.964 / 100.0Complex
TkA06G127010LXL04_024590JCVI_TKOH_0027285.6100.0 / 100.0Complex
TkA06G127330LXL04_024588JCVI_TKOH_0027297.691.964 / 100.0Complex
TkA06G127760LXL04_024586JCVI_TKOH_0027299.099.0 / 74.436Probable
TkA06G128080LXL04_024584JCVI_TKOH_0027299.5100.0 / 100.0Complex
TkA06G130930LXL04_024573JCVI_TKOH_0027298.735.708 / 36.434Review
TkA06G130940LXL04_024572JCVI_TKOH_0027296.2100.0 / 100.0Strict
TkA06G130950LXL04_024570JCVI_TKOH_0027298.8100.0 / 99.593Complex
TkA06G130960LXL04_024569JCVI_TKOH_00272100.0100.0 / 100.0Complex
TkA06G130980LXL04_024567JCVI_TKOH_0027299.3100.0 / 100.0Complex
TkA06G131330LXL04_024563JCVI_TKOH_0027299.398.11 / 96.944Strict
TkA06G131370LXL04_024561JCVI_TKOH_0027298.883.276 / 73.273Complex
TkA06G131440LXL04_024560JCVI_TKOH_0027297.288.76 / 73.291Complex
TkA06G131530LXL04_024559JCVI_TKOH_0027283.4100.0 / 100.0Complex
TkA06G131610LXL04_024557JCVI_TKOH_00272100.084.39 / 100.0Strict
TkA06G131640LXL04_024556JCVI_TKOH_00272100.086.275 / 86.275Strict
TkA06G131680LXL04_024554JCVI_TKOH_0027294.198.515 / 93.182Probable
TkA06G131700LXL04_024553JCVI_TKOH_00272100.0100.0 / 100.0Strict
TkA06G131790LXL04_024552JCVI_TKOH_0027299.4100.0 / 100.0Strict
TkA06G131850LXL04_024551JCVI_TKOH_0027299.1100.0 / 85.938Strict
TkA06G131880LXL04_024550JCVI_TKOH_0027299.4100.0 / 53.395Review
TkA06G131980LXL04_024549JCVI_TKOH_0027291.2100.0 / 100.0Probable
TkA06G132200LXL04_024545JCVI_TKOH_00272100.052.174 / 40.223Complex
TkA06G132310LXL04_024543JCVI_TKOH_0027298.963.791 / 59.973Review
TkA06G132880LXL04_024545JCVI_TKOH_0027298.663.063 / 39.106Complex
TkA06G132890LXL04_024545JCVI_TKOH_0027295.570.968 / 60.894Review
TkA06G132950LXL04_024543JCVI_TKOH_0027298.547.356 / 26.197Complex
TkA06G133450LXL04_024540JCVI_TKOH_0027299.8100.0 / 100.0Strict
TkA06G133610LXL04_024539JCVI_TKOH_0027279.063.78 / 39.13Review
TkA06G133890LXL04_024536JCVI_TKOH_0027299.6100.0 / 100.0Complex
TkA06G133960LXL04_024535JCVI_TKOH_0027299.8100.0 / 100.0Strict
TkA06G134090LXL04_024532JCVI_TKOH_00272100.020.398 / 37.963Complex
TkA06G134330LXL04_024531JCVI_TKOH_0027293.4100.0 / 80.168Probable
TkA06G134380LXL04_024529JCVI_TKOH_0027299.0100.0 / 100.0Strict
TkA06G134710LXL04_024525JCVI_TKOH_0027299.2100.0 / 100.0Strict
TkA06G135430LXL04_024522JCVI_TKOH_00272100.0100.0 / 74.395Probable
TkA06G136480LXL04_024515JCVI_TKOH_0027296.286.885 / 42.57Review
TkA06G136540LXL04_024511JCVI_TKOH_0027293.3100.0 / 100.0Complex
TkA06G136650LXL04_024509JCVI_TKOH_0027278.4100.0 / 100.0Review
TkA06G136690LXL04_024508JCVI_TKOH_0027299.5100.0 / 100.0Complex
TkA06G136820LXL04_024507JCVI_TKOH_0027299.5100.0 / 100.0Strict
TkA06G136890LXL04_024504JCVI_TKOH_00272100.0100.0 / 100.0Strict
TkA06G137290LXL04_024503JCVI_TKOH_0027299.285.612 / 15.888Review
TkA06G137300LXL04_024503JCVI_TKOH_0027247.296.094 / 16.555Complex
TkA06G137310LXL04_024503JCVI_TKOH_0027294.599.751 / 55.808Complex
TkA06G137390LXL04_024502JCVI_TKOH_0027284.387.402 / 83.448Review
TkA06G137420LXL04_024501JCVI_TKOH_0027299.093.455 / 100.0Strict
TkA06G137630LXL04_024497JCVI_TKOH_00272100.0100.0 / 100.0Review
TkA06G137940LXL04_024494JCVI_TKOH_00272100.073.399 / 100.0Review
TkA06G138300LXL04_024491JCVI_TKOH_0027288.880.734 / 60.494Review
TkA06G138710LXL04_024489JCVI_TKOH_0027294.4100.0 / 100.0Probable
TkA06G138730LXL04_024488JCVI_TKOH_0027278.782.648 / 37.708Complex
TkA06G138750LXL04_024488JCVI_TKOH_0027297.581.532 / 37.708Review
TkA06G138760LXL04_024487JCVI_TKOH_0027294.6100.0 / 100.0Probable
TkA06G138770LXL04_024486JCVI_TKOH_0027299.7100.0 / 100.0Complex
TkA06G138850LXL04_024484JCVI_TKOH_00272100.0100.0 / 100.0Strict
TkA06G138860LXL04_024483JCVI_TKOH_0027262.2100.0 / 38.318Complex
TkA06G138870LXL04_024483JCVI_TKOH_0027299.164.972 / 26.869Complex
TkA06G139450LXL04_024476JCVI_TKOH_0027281.9100.0 / 100.0Complex
TkA06G139510LXL04_024475JCVI_TKOH_0027299.1100.0 / 100.0Strict
TkA06G139520LXL04_024474JCVI_TKOH_0027299.283.019 / 77.193Probable
TkA06G139840LXL04_024471JCVI_TKOH_00272100.086.89 / 100.0Strict
TkA06G140230LXL04_024468JCVI_TKOH_0027299.799.361 / 59.961Review
TkA06G140720LXL04_024464JCVI_TKOH_0027294.3100.0 / 100.0Probable
TkA06G140740LXL04_024463JCVI_TKOH_0027271.285.057 / 53.803Review
TkA06G140810LXL04_024462JCVI_TKOH_0027290.5100.0 / 90.164Probable
TkA06G141250LXL04_024461JCVI_TKOH_0027299.3100.0 / 100.0Complex
TkA06G141500LXL04_024457JCVI_TKOH_0027295.6100.0 / 100.0Complex
TkA06G141600LXL04_024455JCVI_TKOH_00272100.0100.0 / 100.0Strict
TkA06G141760LXL04_024454JCVI_TKOH_0027293.997.331 / 99.187Probable
TkA06G142250LXL04_024451JCVI_TKOH_00272100.0100.0 / 100.0Complex
TkA06G142580LXL04_024450JCVI_TKOH_00272100.0100.0 / 100.0Strict
TkA06G142830LXL04_024448JCVI_TKOH_0027296.9100.0 / 74.091Review
TkA06G142840LXL04_024446JCVI_TKOH_0027299.7100.0 / 89.75Strict
TkA06G142950LXL04_024444JCVI_TKOH_00272100.0100.0 / 100.0Strict
TkA06G143500LXL04_024442JCVI_TKOH_00272100.096.491 / 18.739Review
TkA06G143510LXL04_024442JCVI_TKOH_00272100.0100.0 / 33.39Review
TkA06G143550LXL04_024441JCVI_TKOH_0027289.383.41 / 52.674Complex
TkA06G144310LXL04_024435JCVI_TKOH_0027299.6100.0 / 100.0Strict
TkA06G144610LXL04_024434JCVI_TKOH_00272100.097.458 / 28.256Review
TkA06G145050LXL04_024432JCVI_TKOH_0027290.883.333 / 37.736Complex
TkA06G145110LXL04_024429JCVI_TKOH_0027299.3100.0 / 100.0Complex
TkA06G145160LXL04_024426JCVI_TKOH_0027298.9100.0 / 100.0Strict
TkA06G145190LXL04_024425JCVI_TKOH_00272100.0100.0 / 100.0Complex
TkA06G145350LXL04_024424JCVI_TKOH_0027299.499.788 / 81.739Strict
TkA06G145470LXL04_024423JCVI_TKOH_0027280.4100.0 / 71.972Review
TkA06G145480LXL04_024422JCVI_TKOH_0027295.498.424 / 99.828Strict
TkA06G145490LXL04_024421JCVI_TKOH_0027298.1100.0 / 100.0Strict
TkA06G145880LXL04_024420JCVI_TKOH_0027299.298.118 / 56.327Review
TkA06G146090LXL04_024416JCVI_TKOH_0027297.798.467 / 92.115Strict
TkA06G146160LXL04_024414JCVI_TKOH_0027296.3100.0 / 94.534Strict
TkA06G146710LXL04_024410JCVI_TKOH_0027294.287.626 / 100.0Probable
TkA06G146860LXL04_024409JCVI_TKOH_0027293.7100.0 / 100.0Probable
TkA06G146870LXL04_024408JCVI_TKOH_0027296.0100.0 / 100.0Strict
TkA06G146890LXL04_024407JCVI_TKOH_0027299.0100.0 / 99.27Complex
TkA06G147000LXL04_024405JCVI_TKOH_0027296.5100.0 / 37.704Review
TkA06G147140LXL04_024404JCVI_TKOH_00272100.0100.0 / 100.0Review
TkA06G147170LXL04_024403JCVI_TKOH_0027287.098.753 / 85.945Review
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