Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00095
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 387
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00095

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00095 Chr02 128804611-139049026 Chr03 18530971-28485416 mixed High 187 anchors
Chr02 128804611-139049026 Chr03 18530971-28485416 JCVI_TKOH_00095 · 387 gene pairs TkA02G523100 | LXL04_013013 | 98.9% | RBH_high_identity_coverage_synteny | Strict TkA02G523160 | LXL04_013012 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA02G523170 | LXL04_013011 | 87.1% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA02G523320 | LXL04_013008 | 98.8% | sequence_supported_annotation_or_model_conflict | Review TkA02G523470 | LXL04_013005 | 72.1% | non_reciprocal_best_hit | Complex TkA02G523860 | LXL04_013002 | 87.0% | non_reciprocal_best_hit | Complex TkA02G523880 | LXL04_013003 | 97.2% | RBH_high_identity_coverage_synteny | Strict TkA02G523960 | LXL04_013002 | 97.2% | sequence_supported_annotation_or_model_conflict | Review TkA02G523980 | LXL04_013001 | 97.5% | non_reciprocal_best_hit | Complex TkA02G524120 | LXL04_012999 | 69.4% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA02G524230 | LXL04_012997 | 99.4% | RBH_high_identity_coverage_synteny | Strict TkA02G524370 | LXL04_012994 | 100.0% | multi_source_to_OH1004 | Complex
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00095 Chr02:128804611-139049026 Chr03:18530971-28485416 mixed 387 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 387 · Showing 201–387 · Page 2/2

TkA02G523100 → LXL04_013013
98.9%
TkA02G523160 → LXL04_013012
100.0%
TkA02G523170 → LXL04_013011
87.1%
TkA02G523320 → LXL04_013008
98.8%
TkA02G523470 → LXL04_013005
72.1%
TkA02G523860 → LXL04_013002
87.0%
TkA02G523880 → LXL04_013003
97.2%
TkA02G523960 → LXL04_013002
97.2%
TkA02G523980 → LXL04_013001
97.5%
TkA02G524120 → LXL04_012999
69.4%
TkA02G524230 → LXL04_012997
99.4%
TkA02G524370 → LXL04_012994
100.0%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA02G523100LXL04_013013JCVI_TKOH_0009598.9100.0 / 100.0Strict
TkA02G523160LXL04_013012JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G523170LXL04_013011JCVI_TKOH_0009587.1100.0 / 98.992Review
TkA02G523320LXL04_013008JCVI_TKOH_0009598.899.531 / 49.474Review
TkA02G523470LXL04_013005JCVI_TKOH_0009572.196.721 / 33.921Complex
TkA02G523860LXL04_013002JCVI_TKOH_0009587.086.466 / 6.371Complex
TkA02G523880LXL04_013003JCVI_TKOH_0009597.2100.0 / 98.608Strict
TkA02G523960LXL04_013002JCVI_TKOH_0009597.297.862 / 43.546Review
TkA02G523980LXL04_013001JCVI_TKOH_0009597.57.246 / 3.891Complex
TkA02G524120LXL04_012999JCVI_TKOH_0009569.46.557 / 6.777Review
TkA02G524230LXL04_012997JCVI_TKOH_0009599.4100.0 / 100.0Strict
TkA02G524370LXL04_012994JCVI_TKOH_00095100.0100.0 / 100.0Complex
TkA02G524440LXL04_012991JCVI_TKOH_0009590.999.296 / 78.173Complex
TkA02G524450LXL04_012990JCVI_TKOH_0009578.886.429 / 79.348Complex
TkA02G524490LXL04_012989JCVI_TKOH_0009589.883.761 / 26.923Complex
TkA02G524500LXL04_012989JCVI_TKOH_00095100.034.722 / 13.736Complex
TkA02G524620LXL04_012985JCVI_TKOH_0009598.5100.0 / 27.615Review
TkA02G524630LXL04_012984JCVI_TKOH_0009585.692.346 / 77.002Complex
TkA02G524940LXL04_012994JCVI_TKOH_0009599.1100.0 / 100.0Complex
TkA02G525010LXL04_012991JCVI_TKOH_0009590.999.296 / 78.173Complex
TkA02G525020LXL04_012990JCVI_TKOH_0009578.186.429 / 79.348Complex
TkA02G525100LXL04_012989JCVI_TKOH_0009597.3100.0 / 100.0Strict
TkA02G525180LXL04_012988JCVI_TKOH_0009593.9100.0 / 100.0Complex
TkA02G525190LXL04_012987JCVI_TKOH_0009592.6100.0 / 100.0Complex
TkA02G525210LXL04_012986JCVI_TKOH_0009599.8100.0 / 100.0Strict
TkA02G525230LXL04_012985JCVI_TKOH_0009599.3100.0 / 83.682Strict
TkA02G525240LXL04_012984JCVI_TKOH_0009585.399.728 / 88.09Complex
TkA02G525260LXL04_012982JCVI_TKOH_0009559.117.46 / 43.564Complex
TkA02G525310LXL04_012984JCVI_TKOH_0009581.398.821 / 98.768Complex
TkA02G525350LXL04_012982JCVI_TKOH_0009542.430.723 / 65.347Complex
TkA02G525390LXL04_012981JCVI_TKOH_00095100.0100.0 / 26.332Review
TkA02G525400LXL04_012979JCVI_TKOH_0009587.4100.0 / 79.297Complex
TkA02G525410LXL04_012978JCVI_TKOH_0009594.799.848 / 99.852Probable
TkA02G525630LXL04_012976JCVI_TKOH_0009599.798.429 / 100.0Complex
TkA02G525640LXL04_012973JCVI_TKOH_0009597.2100.0 / 100.0Strict
TkA02G525650LXL04_012974JCVI_TKOH_0009596.487.5 / 46.825Review
TkA02G525670LXL04_012971JCVI_TKOH_0009599.488.442 / 66.92Review
TkA02G525880LXL04_012969JCVI_TKOH_0009599.697.99 / 87.848Complex
TkA02G525890LXL04_012968JCVI_TKOH_0009598.9100.0 / 100.0Strict
TkA02G525900LXL04_012967JCVI_TKOH_0009598.7100.0 / 100.0Strict
TkA02G525980LXL04_012965JCVI_TKOH_00095100.0100.0 / 89.45Complex
TkA02G525990LXL04_012964JCVI_TKOH_0009599.2100.0 / 100.0Strict
TkA02G526000LXL04_012963JCVI_TKOH_0009597.3100.0 / 75.709Probable
TkA02G526240LXL04_012960JCVI_TKOH_0009594.0100.0 / 100.0Probable
TkA02G526430LXL04_012957JCVI_TKOH_0009599.4100.0 / 100.0Strict
TkA02G526440LXL04_012956JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G526600LXL04_012954JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G526800LXL04_012953JCVI_TKOH_0009598.095.146 / 100.0Review
TkA02G527090LXL04_012951JCVI_TKOH_00095100.0100.0 / 19.124Review
TkA02G527110LXL04_012950JCVI_TKOH_0009588.4100.0 / 100.0Complex
TkA02G527120LXL04_012949JCVI_TKOH_0009593.7100.0 / 100.0Complex
TkA02G527200LXL04_012948JCVI_TKOH_00095100.0100.0 / 100.0Complex
TkA02G527340LXL04_012946JCVI_TKOH_00095100.050.781 / 34.759Review
TkA02G527470LXL04_012944JCVI_TKOH_0009597.4100.0 / 75.758Probable
TkA02G527530LXL04_012941JCVI_TKOH_0009599.5100.0 / 100.0Complex
TkA02G527540LXL04_012941JCVI_TKOH_0009591.0100.0 / 100.0Complex
TkA02G527710LXL04_012938JCVI_TKOH_0009596.290.594 / 77.215Probable
TkA02G527740LXL04_012937JCVI_TKOH_0009598.799.711 / 96.761Strict
TkA02G528050LXL04_012934JCVI_TKOH_0009581.497.746 / 42.984Complex
TkA02G528090LXL04_012934JCVI_TKOH_0009581.794.279 / 42.292Complex
TkA02G528610LXL04_012934JCVI_TKOH_0009599.799.558 / 55.534Review
TkA02G528820LXL04_012933JCVI_TKOH_0009598.6100.0 / 100.0Strict
TkA02G529080LXL04_012932JCVI_TKOH_0009597.8100.0 / 100.0Strict
TkA02G529090LXL04_012931JCVI_TKOH_0009598.9100.0 / 96.918Complex
TkA02G529100LXL04_012930JCVI_TKOH_0009595.7100.0 / 41.584Review
TkA02G529150LXL04_012933JCVI_TKOH_0009594.272.125 / 40.99Complex
TkA02G529190LXL04_012932JCVI_TKOH_0009596.594.04 / 28.629Review
TkA02G529570LXL04_012931JCVI_TKOH_0009596.995.677 / 78.428Complex
TkA02G529770LXL04_012930JCVI_TKOH_0009594.096.486 / 49.092Review
TkA02G529780LXL04_012929JCVI_TKOH_0009599.398.339 / 99.627Strict
TkA02G529950LXL04_012927JCVI_TKOH_0009599.9100.0 / 48.944Review
TkA02G529960LXL04_012927JCVI_TKOH_0009599.9100.0 / 50.992Review
TkA02G530230LXL04_012926JCVI_TKOH_0009594.6100.0 / 100.0Complex
TkA02G530240LXL04_012925JCVI_TKOH_0009599.7100.0 / 96.906Strict
TkA02G530260LXL04_012923JCVI_TKOH_0009599.9100.0 / 100.0Complex
TkA02G530320LXL04_012922JCVI_TKOH_00095100.0100.0 / 98.69Strict
TkA02G530380LXL04_012921JCVI_TKOH_0009599.4100.0 / 100.0Strict
TkA02G530390LXL04_012920JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G530730LXL04_012917JCVI_TKOH_0009598.996.96 / 87.933Strict
TkA02G530740LXL04_012916JCVI_TKOH_00095100.097.297 / 71.186Probable
TkA02G530750LXL04_012915JCVI_TKOH_0009599.698.258 / 31.229Review
TkA02G530770LXL04_012914JCVI_TKOH_0009599.2100.0 / 48.603Review
TkA02G530850LXL04_012913JCVI_TKOH_0009595.4100.0 / 93.957Strict
TkA02G530880LXL04_012912JCVI_TKOH_0009564.396.578 / 98.529Review
TkA02G530890LXL04_012911JCVI_TKOH_0009599.596.373 / 32.92Review
TkA02G531140LXL04_012908JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G531160LXL04_012907JCVI_TKOH_0009599.399.649 / 90.0Strict
TkA02G531170LXL04_012905JCVI_TKOH_0009599.699.2 / 96.498Strict
TkA02G531180LXL04_012904JCVI_TKOH_0009598.3100.0 / 100.0Strict
TkA02G531270LXL04_012903JCVI_TKOH_0009599.2100.0 / 97.581Strict
TkA02G531280LXL04_012902JCVI_TKOH_00095100.099.174 / 50.633Review
TkA02G531300LXL04_012901JCVI_TKOH_00095100.0100.0 / 98.049Strict
TkA02G531550LXL04_012899JCVI_TKOH_0009598.4100.0 / 96.891Review
TkA02G531610LXL04_012898JCVI_TKOH_0009582.599.536 / 33.994Review
TkA02G531620LXL04_012897JCVI_TKOH_0009595.2100.0 / 87.232Strict
TkA02G531640LXL04_012896JCVI_TKOH_0009598.680.233 / 58.298Complex
TkA02G531650LXL04_012895JCVI_TKOH_00095100.098.817 / 60.507Complex
TkA02G531750LXL04_012893JCVI_TKOH_00095100.096.842 / 54.277Review
TkA02G531850LXL04_012891JCVI_TKOH_0009599.4100.0 / 100.0Strict
TkA02G531890LXL04_012890JCVI_TKOH_0009596.199.65 / 87.692Strict
TkA02G531920LXL04_012888JCVI_TKOH_0009552.695.07 / 88.158Complex
TkA02G532210LXL04_012888JCVI_TKOH_0009570.599.057 / 68.421Complex
TkA02G532250LXL04_012888JCVI_TKOH_0009596.987.162 / 84.868Complex
TkA02G532450LXL04_012887JCVI_TKOH_0009599.2100.0 / 93.023Strict
TkA02G532490LXL04_012886JCVI_TKOH_0009599.5100.0 / 100.0Strict
TkA02G532500LXL04_012885JCVI_TKOH_0009587.7100.0 / 100.0Review
TkA02G532530LXL04_012884JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G532840LXL04_012878JCVI_TKOH_0009599.4100.0 / 100.0Complex
TkA02G532920LXL04_012877JCVI_TKOH_0009598.599.71 / 65.9Complex
TkA02G532940LXL04_012876JCVI_TKOH_0009598.365.746 / 38.762Complex
TkA02G532980LXL04_012875JCVI_TKOH_0009598.7100.0 / 100.0Complex
TkA02G533290LXL04_012871JCVI_TKOH_0009599.199.855 / 51.949Review
TkA02G533440LXL04_012878JCVI_TKOH_00095100.0100.0 / 100.0Complex
TkA02G533520LXL04_012877JCVI_TKOH_0009599.8100.0 / 100.0Complex
TkA02G533540LXL04_012876JCVI_TKOH_00095100.0100.0 / 39.739Review
TkA02G533740LXL04_012875JCVI_TKOH_0009597.6100.0 / 100.0Complex
TkA02G534080LXL04_012871JCVI_TKOH_0009598.799.873 / 59.52Review
TkA02G534450LXL04_012870JCVI_TKOH_0009590.8100.0 / 100.0Probable
TkA02G534590LXL04_012864JCVI_TKOH_0009579.2100.0 / 99.36Review
TkA02G534750LXL04_012859JCVI_TKOH_0009588.095.167 / 27.423Complex
TkA02G534970LXL04_012854JCVI_TKOH_0009597.9100.0 / 100.0Complex
TkA02G535140LXL04_012853JCVI_TKOH_0009599.5100.0 / 100.0Complex
TkA02G535410LXL04_012851JCVI_TKOH_00095100.095.57 / 9.931Review
TkA02G535420LXL04_012851JCVI_TKOH_0009598.899.516 / 47.156Review
TkA02G535500LXL04_012850JCVI_TKOH_0009599.3100.0 / 56.258Review
TkA02G535510LXL04_012849JCVI_TKOH_0009599.6100.0 / 100.0Strict
TkA02G535530LXL04_012848JCVI_TKOH_00095100.093.631 / 100.0Strict
TkA02G535610LXL04_012845JCVI_TKOH_0009598.8100.0 / 100.0Strict
TkA02G535640LXL04_012844JCVI_TKOH_0009597.1100.0 / 100.0Strict
TkA02G535650LXL04_012843JCVI_TKOH_0009599.8100.0 / 98.364Strict
TkA02G535660LXL04_012842JCVI_TKOH_00095100.099.762 / 99.526Strict
TkA02G535710LXL04_012840JCVI_TKOH_00095100.097.279 / 58.848Review
TkA02G535740LXL04_012838JCVI_TKOH_0009599.4100.0 / 100.0Strict
TkA02G535810LXL04_012837JCVI_TKOH_0009599.1100.0 / 88.672Strict
TkA02G535840LXL04_012832JCVI_TKOH_0009584.798.39 / 69.688Complex
TkA02G535850LXL04_012835JCVI_TKOH_0009599.0100.0 / 100.0Complex
TkA02G535860LXL04_012834JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G535930LXL04_012833JCVI_TKOH_0009599.1100.0 / 100.0Complex
TkA02G535960LXL04_012832JCVI_TKOH_0009595.032.787 / 5.774Complex
TkA02G536050LXL04_012832JCVI_TKOH_0009587.897.77 / 15.127Complex
TkA02G536060LXL04_012832JCVI_TKOH_0009599.763.72 / 39.954Review
TkA02G536080LXL04_012831JCVI_TKOH_0009580.8100.0 / 100.0Complex
TkA02G536130LXL04_012828JCVI_TKOH_0009598.2100.0 / 100.0Complex
TkA02G536260LXL04_012827JCVI_TKOH_00095100.094.0 / 94.0Complex
TkA02G536470LXL04_012825JCVI_TKOH_0009599.7100.0 / 100.0Strict
TkA02G536550LXL04_012823JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G536560LXL04_012822JCVI_TKOH_0009599.193.86 / 100.0Strict
TkA02G536570LXL04_012821JCVI_TKOH_00095100.0100.0 / 65.854Review
TkA02G536580LXL04_012820JCVI_TKOH_00095100.0100.0 / 62.745Review
TkA02G536590LXL04_012819JCVI_TKOH_0009599.6100.0 / 100.0Strict
TkA02G537050LXL04_012817JCVI_TKOH_00095100.096.622 / 15.732Review
TkA02G537060LXL04_012817JCVI_TKOH_0009592.999.497 / 69.967Complex
TkA02G537120LXL04_012815JCVI_TKOH_0009568.799.096 / 51.817Complex
TkA02G537170LXL04_012815JCVI_TKOH_0009599.5100.0 / 100.0Complex
TkA02G537190LXL04_012814JCVI_TKOH_0009593.457.962 / 91.919Complex
TkA02G537280LXL04_012813JCVI_TKOH_0009583.4100.0 / 100.0Review
TkA02G537300LXL04_012812JCVI_TKOH_0009599.2100.0 / 100.0Strict
TkA02G537310LXL04_012811JCVI_TKOH_00095100.081.557 / 100.0Strict
TkA02G537320LXL04_012810JCVI_TKOH_0009599.1100.0 / 100.0Strict
TkA02G537380LXL04_012808JCVI_TKOH_00095100.099.576 / 60.102Review
TkA02G537390LXL04_012806JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G537470LXL04_012801JCVI_TKOH_0009597.1100.0 / 100.0Complex
TkA02G537480LXL04_012805JCVI_TKOH_0009591.797.794 / 61.692Complex
TkA02G537490LXL04_012804JCVI_TKOH_0009593.754.676 / 43.407Review
TkA02G537510LXL04_012802JCVI_TKOH_0009590.893.865 / 96.689Probable
TkA02G537520LXL04_012801JCVI_TKOH_0009599.0100.0 / 100.0Complex
TkA02G537570LXL04_012799JCVI_TKOH_0009573.799.363 / 96.855Review
TkA02G537580LXL04_012798JCVI_TKOH_0009592.9100.0 / 100.0Probable
TkA02G537640LXL04_012797JCVI_TKOH_0009593.9100.0 / 100.0Probable
TkA02G537680LXL04_012796JCVI_TKOH_0009595.8100.0 / 100.0Complex
TkA02G537700LXL04_012795JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G537970LXL04_012792JCVI_TKOH_0009599.6100.0 / 100.0Strict
TkA02G537980LXL04_012791JCVI_TKOH_0009595.988.843 / 76.289Probable
TkA02G537990LXL04_012789JCVI_TKOH_0009592.399.898 / 100.0Probable
TkA02G538060LXL04_012789JCVI_TKOH_0009590.092.287 / 34.43Complex
TkA02G538070LXL04_012791JCVI_TKOH_0009595.098.519 / 48.11Review
TkA02G538370LXL04_012775JCVI_TKOH_0009599.1100.0 / 100.0Strict
TkA02G538400LXL04_012776JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G538600LXL04_012778JCVI_TKOH_0009592.597.111 / 86.029Complex
TkA02G538630LXL04_012779JCVI_TKOH_0009597.754.717 / 93.548Review
TkA02G538680LXL04_012780JCVI_TKOH_00095100.0100.0 / 100.0Complex
TkA02G538860LXL04_012782JCVI_TKOH_00095100.099.729 / 93.878Complex
TkA02G538900LXL04_012783JCVI_TKOH_00095100.098.885 / 30.575Review
TkA02G538910LXL04_012783JCVI_TKOH_0009580.0100.0 / 61.034Complex
TkA02G538920LXL04_012784JCVI_TKOH_0009599.197.309 / 83.142Complex
TkA02G539090LXL04_012785JCVI_TKOH_00095100.085.0 / 38.202Review
TkA02G539140LXL04_012787JCVI_TKOH_0009599.4100.0 / 100.0Review