Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00143
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 256
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00143

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00143 Chr03 80926408-93928728 Chr02 97361592-109750028 mixed High 200 anchors
Chr03 80926408-93928728 Chr02 97361592-109750028 JCVI_TKOH_00143 · 256 gene pairs TkA03G329140 | LXL04_008822 | 96.4% | sequence_supported_annotation_or_model_conflict | Review TkA03G329350 | LXL04_008820 | 93.5% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA03G329470 | LXL04_008817 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA03G329870 | LXL04_008813 | 94.0% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA03G329920 | LXL04_008809 | 92.9% | non_reciprocal_best_hit | Complex TkA03G330080 | LXL04_008812 | 94.6% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA03G330240 | LXL04_008809 | 98.9% | non_reciprocal_best_hit | Complex TkA03G330610 | LXL04_008804 | 90.0% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA03G330990 | LXL04_008802 | 94.0% | multi_source_to_OH1004 | Complex TkA03G331370 | LXL04_008801 | 78.7% | multi_source_to_OH1004 | Complex TkA03G331590 | LXL04_008800 | 100.0% | multi_source_to_OH1004 | Complex TkA03G331680 | LXL04_008800 | 76.7% | non_reciprocal_best_hit | Complex
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00143 Chr03:80926408-93928728 Chr02:97361592-109750028 mixed 256 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 256 · Showing 1–200 · Page 1/2

TkA03G329140 → LXL04_008822
96.4%
TkA03G329350 → LXL04_008820
93.5%
TkA03G329470 → LXL04_008817
100.0%
TkA03G329870 → LXL04_008813
94.0%
TkA03G329920 → LXL04_008809
92.9%
TkA03G330080 → LXL04_008812
94.6%
TkA03G330240 → LXL04_008809
98.9%
TkA03G330610 → LXL04_008804
90.0%
TkA03G330990 → LXL04_008802
94.0%
TkA03G331370 → LXL04_008801
78.7%
TkA03G331590 → LXL04_008800
100.0%
TkA03G331680 → LXL04_008800
76.7%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA03G329140LXL04_008822JCVI_TKOH_0014396.4100.0 / 39.583Review
TkA03G329350LXL04_008820JCVI_TKOH_0014393.598.723 / 85.442Review
TkA03G329470LXL04_008817JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G329870LXL04_008813JCVI_TKOH_0014394.0100.0 / 91.56Review
TkA03G329920LXL04_008809JCVI_TKOH_0014392.9100.0 / 57.621Complex
TkA03G330080LXL04_008812JCVI_TKOH_0014394.6100.0 / 100.0Review
TkA03G330240LXL04_008809JCVI_TKOH_0014398.9100.0 / 66.357Complex
TkA03G330610LXL04_008804JCVI_TKOH_0014390.095.898 / 47.794Review
TkA03G330990LXL04_008802JCVI_TKOH_0014394.0100.0 / 100.0Complex
TkA03G331370LXL04_008801JCVI_TKOH_0014378.796.341 / 100.0Complex
TkA03G331590LXL04_008800JCVI_TKOH_00143100.0100.0 / 100.0Complex
TkA03G331680LXL04_008800JCVI_TKOH_0014376.799.398 / 99.398Complex
TkA03G332410LXL04_008800JCVI_TKOH_0014370.199.399 / 99.398Complex
TkA03G332560LXL04_008793JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G332570LXL04_008792JCVI_TKOH_0014399.5100.0 / 100.0Strict
TkA03G332580LXL04_008791JCVI_TKOH_0014398.764.167 / 64.167Review
TkA03G332600LXL04_008790JCVI_TKOH_0014395.1100.0 / 96.223Strict
TkA03G332610LXL04_008789JCVI_TKOH_0014392.5100.0 / 100.0Complex
TkA03G332630LXL04_008787JCVI_TKOH_0014399.799.836 / 99.836Strict
TkA03G332990LXL04_008821JCVI_TKOH_0014358.281.679 / 74.483Review
TkA03G334380LXL04_008773JCVI_TKOH_0014399.5100.0 / 100.0Complex
TkA03G334400LXL04_008772JCVI_TKOH_0014396.6100.0 / 100.0Complex
TkA03G334410LXL04_008771JCVI_TKOH_00143100.0100.0 / 100.0Complex
TkA03G334540LXL04_008769JCVI_TKOH_0014393.5100.0 / 98.406Probable
TkA03G334740LXL04_008763JCVI_TKOH_0014399.8100.0 / 100.0Review
TkA03G334860LXL04_008761JCVI_TKOH_0014352.7100.0 / 33.03Complex
TkA03G334870LXL04_008761JCVI_TKOH_0014348.662.385 / 20.909Complex
TkA03G336300LXL04_008764JCVI_TKOH_0014399.3100.0 / 100.0Complex
TkA03G336490LXL04_008763JCVI_TKOH_0014399.8100.0 / 100.0Complex
TkA03G336790LXL04_008760JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G337430LXL04_008756JCVI_TKOH_00143100.084.564 / 100.0Strict
TkA03G337510LXL04_008753JCVI_TKOH_00143100.095.692 / 67.316Review
TkA03G338010LXL04_008750JCVI_TKOH_0014397.692.481 / 51.037Review
TkA03G338050LXL04_008749JCVI_TKOH_0014397.059.459 / 51.163Complex
TkA03G338060LXL04_008748JCVI_TKOH_0014392.0100.0 / 100.0Complex
TkA03G338620LXL04_008746JCVI_TKOH_0014394.177.273 / 29.21Complex
TkA03G338700LXL04_008745JCVI_TKOH_0014375.887.391 / 67.606Complex
TkA03G338720LXL04_008745JCVI_TKOH_0014398.383.944 / 83.944Complex
TkA03G339080LXL04_008731JCVI_TKOH_0014390.234.857 / 8.841Complex
TkA03G339670LXL04_008738JCVI_TKOH_0014399.2100.0 / 81.373Strict
TkA03G339770LXL04_008737JCVI_TKOH_0014399.1100.0 / 100.0Strict
TkA03G339860LXL04_008733JCVI_TKOH_0014399.0100.0 / 100.0Strict
TkA03G340640LXL04_008732JCVI_TKOH_0014388.3100.0 / 100.0Review
TkA03G341900LXL04_008725JCVI_TKOH_0014399.8100.0 / 100.0Strict
TkA03G341980LXL04_008724JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G341990LXL04_008723JCVI_TKOH_0014399.4100.0 / 73.504Complex
TkA03G342370LXL04_008720JCVI_TKOH_0014397.6100.0 / 100.0Strict
TkA03G342380LXL04_008719JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G342400LXL04_008718JCVI_TKOH_0014399.0100.0 / 100.0Strict
TkA03G342410LXL04_008717JCVI_TKOH_0014390.694.118 / 98.537Review
TkA03G343060LXL04_008714JCVI_TKOH_00143100.0100.0 / 100.0Complex
TkA03G343410LXL04_008713JCVI_TKOH_0014399.3100.0 / 100.0Complex
TkA03G343420LXL04_008712JCVI_TKOH_00143100.0100.0 / 100.0Review
TkA03G343460LXL04_008711JCVI_TKOH_00143100.0100.0 / 91.316Complex
TkA03G343750LXL04_008707JCVI_TKOH_0014384.999.254 / 61.088Complex
TkA03G343890LXL04_008706JCVI_TKOH_0014399.2100.0 / 100.0Complex
TkA03G343900LXL04_008705JCVI_TKOH_0014392.0100.0 / 100.0Complex
TkA03G344020LXL04_008702JCVI_TKOH_0014399.5100.0 / 100.0Complex
TkA03G344040LXL04_008701JCVI_TKOH_0014395.4100.0 / 100.0Review
TkA03G344050LXL04_008700JCVI_TKOH_0014399.7100.0 / 71.533Complex
TkA03G344310LXL04_008699JCVI_TKOH_0014395.494.049 / 39.951Review
TkA03G344370LXL04_008697JCVI_TKOH_00143100.099.065 / 32.919Review
TkA03G344380LXL04_008696JCVI_TKOH_0014399.9100.0 / 100.0Complex
TkA03G344400LXL04_008695JCVI_TKOH_00143100.098.958 / 96.939Complex
TkA03G344410LXL04_008694JCVI_TKOH_0014399.7100.0 / 100.0Strict
TkA03G344420LXL04_008691JCVI_TKOH_0014399.699.606 / 83.114Strict
TkA03G344660LXL04_008688JCVI_TKOH_0014394.192.922 / 57.324Complex
TkA03G344710LXL04_008687JCVI_TKOH_0014398.598.375 / 88.413Complex
TkA03G344720LXL04_008686JCVI_TKOH_0014392.2100.0 / 100.0Complex
TkA03G344730LXL04_008685JCVI_TKOH_0014398.3100.0 / 100.0Strict
TkA03G344780LXL04_008682JCVI_TKOH_0014399.497.727 / 100.0Strict
TkA03G344800LXL04_008681JCVI_TKOH_0014399.7100.0 / 100.0Complex
TkA03G344820LXL04_008680JCVI_TKOH_0014380.0100.0 / 100.0Complex
TkA03G345100LXL04_008679JCVI_TKOH_0014397.098.152 / 90.46Strict
TkA03G345220LXL04_008678JCVI_TKOH_0014399.4100.0 / 59.41Review
TkA03G345350LXL04_008676JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G346510LXL04_008673JCVI_TKOH_00143100.0100.0 / 100.0Review
TkA03G346720LXL04_008672JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G346980LXL04_008671JCVI_TKOH_00143100.0100.0 / 100.0Review
TkA03G347420LXL04_008670JCVI_TKOH_0014397.7100.0 / 100.0Strict
TkA03G348030LXL04_008666JCVI_TKOH_0014399.0100.0 / 100.0Strict
TkA03G348150LXL04_008664JCVI_TKOH_0014393.2100.0 / 73.913Complex
TkA03G348240LXL04_008663JCVI_TKOH_00143100.0100.0 / 57.616Review
TkA03G348300LXL04_008662JCVI_TKOH_0014399.595.89 / 42.857Review
TkA03G348340LXL04_008660JCVI_TKOH_0014399.5100.0 / 100.0Complex
TkA03G348350LXL04_008659JCVI_TKOH_0014396.0100.0 / 43.373Review
TkA03G348430LXL04_008658JCVI_TKOH_00143100.082.857 / 77.679Complex
TkA03G348440LXL04_008657JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G348750LXL04_008656JCVI_TKOH_0014394.2100.0 / 100.0Probable
TkA03G348780LXL04_008655JCVI_TKOH_0014397.4100.0 / 100.0Strict
TkA03G348850LXL04_008653JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G349150LXL04_008652JCVI_TKOH_0014398.8100.0 / 78.549Complex
TkA03G349330LXL04_008651JCVI_TKOH_0014399.6100.0 / 100.0Strict
TkA03G349430LXL04_008650JCVI_TKOH_0014398.5100.0 / 91.954Strict
TkA03G349590LXL04_008649JCVI_TKOH_0014399.097.196 / 85.014Complex
TkA03G349630LXL04_008648JCVI_TKOH_0014399.8100.0 / 100.0Complex
TkA03G350110LXL04_008642JCVI_TKOH_0014395.9100.0 / 100.0Complex
TkA03G350310LXL04_008641JCVI_TKOH_00143100.0100.0 / 100.0Review
TkA03G350590LXL04_008639JCVI_TKOH_00143100.0100.0 / 100.0Review
TkA03G350660LXL04_008638JCVI_TKOH_0014362.7100.0 / 91.089Complex
TkA03G350680LXL04_008637JCVI_TKOH_0014389.287.129 / 41.704Complex
TkA03G350700LXL04_008636JCVI_TKOH_00143100.0100.0 / 100.0Complex
TkA03G350970LXL04_008639JCVI_TKOH_00143100.0100.0 / 100.0Complex
TkA03G351010LXL04_008638JCVI_TKOH_0014362.7100.0 / 91.089Complex
TkA03G351030LXL04_008637JCVI_TKOH_00143100.091.509 / 43.498Review
TkA03G351110LXL04_008636JCVI_TKOH_00143100.0100.0 / 100.0Complex
TkA03G351610LXL04_008633JCVI_TKOH_0014391.4100.0 / 100.0Probable
TkA03G351740LXL04_008631JCVI_TKOH_0014379.074.031 / 56.471Complex
TkA03G351770LXL04_008630JCVI_TKOH_0014396.498.74 / 78.897Probable
TkA03G351940LXL04_008627JCVI_TKOH_00143100.098.34 / 50.0Review
TkA03G351950LXL04_008628JCVI_TKOH_00143100.087.558 / 72.243Review
TkA03G351980LXL04_008626JCVI_TKOH_0014399.4100.0 / 100.0Strict
TkA03G352280LXL04_008623JCVI_TKOH_0014399.0100.0 / 100.0Strict
TkA03G352300LXL04_008622JCVI_TKOH_00143100.0100.0 / 95.645Strict
TkA03G352430LXL04_008621JCVI_TKOH_0014376.160.0 / 50.0Complex
TkA03G352550LXL04_008618JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G352970LXL04_008616JCVI_TKOH_0014398.398.311 / 48.179Review
TkA03G353000LXL04_008615JCVI_TKOH_0014399.699.2 / 75.725Complex
TkA03G353770LXL04_008605JCVI_TKOH_0014399.7100.0 / 100.0Complex
TkA03G353910LXL04_008604JCVI_TKOH_0014398.699.524 / 36.174Review
TkA03G354520LXL04_008599JCVI_TKOH_0014396.798.361 / 28.329Review
TkA03G354580LXL04_008598JCVI_TKOH_0014397.397.987 / 74.129Complex
TkA03G356070LXL04_008590JCVI_TKOH_0014397.699.774 / 77.32Probable
TkA03G356080LXL04_008589JCVI_TKOH_00143100.087.647 / 58.661Review
TkA03G356090LXL04_008588JCVI_TKOH_0014399.096.0 / 53.631Review
TkA03G356380LXL04_008586JCVI_TKOH_0014393.797.386 / 100.0Probable
TkA03G357020LXL04_008583JCVI_TKOH_0014392.7100.0 / 100.0Probable
TkA03G357030LXL04_008582JCVI_TKOH_00143100.0100.0 / 79.015Complex
TkA03G357040LXL04_008581JCVI_TKOH_0014389.696.07 / 99.051Review
TkA03G357420LXL04_008580JCVI_TKOH_0014395.5100.0 / 100.0Strict
TkA03G357580LXL04_008578JCVI_TKOH_0014396.8100.0 / 100.0Strict
TkA03G357590LXL04_008577JCVI_TKOH_0014399.497.874 / 97.476Strict
TkA03G357950LXL04_008575JCVI_TKOH_00143100.068.681 / 57.604Review
TkA03G358130LXL04_008573JCVI_TKOH_0014399.785.359 / 98.408Strict
TkA03G358170LXL04_008572JCVI_TKOH_00143100.099.375 / 54.639Review
TkA03G358340LXL04_008571JCVI_TKOH_0014396.588.737 / 59.765Review
TkA03G358390LXL04_008570JCVI_TKOH_0014398.7100.0 / 100.0Strict
TkA03G358440LXL04_008567JCVI_TKOH_0014397.699.043 / 68.885Review
TkA03G358460LXL04_008566JCVI_TKOH_0014399.5100.0 / 100.0Strict
TkA03G358540LXL04_008564JCVI_TKOH_0014392.096.818 / 46.696Review
TkA03G358710LXL04_008561JCVI_TKOH_00143100.0100.0 / 100.0Review
TkA03G358790LXL04_008560JCVI_TKOH_0014398.4100.0 / 100.0Strict
TkA03G358800LXL04_008559JCVI_TKOH_0014399.5100.0 / 100.0Strict
TkA03G358820LXL04_008558JCVI_TKOH_0014387.386.01 / 97.076Review
TkA03G359280LXL04_008557JCVI_TKOH_00143100.0100.0 / 100.0Complex
TkA03G359530LXL04_008555JCVI_TKOH_0014360.792.632 / 91.489Review
TkA03G359570LXL04_008553JCVI_TKOH_0014386.2100.0 / 100.0Complex
TkA03G359660LXL04_008552JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G359670LXL04_008551JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G360210LXL04_008549JCVI_TKOH_0014364.848.241 / 23.35Complex
TkA03G360220LXL04_008547JCVI_TKOH_0014392.492.578 / 35.921Complex
TkA03G360350LXL04_008547JCVI_TKOH_0014389.1100.0 / 97.412Complex
TkA03G360390LXL04_008545JCVI_TKOH_0014398.0100.0 / 100.0Review
TkA03G360650LXL04_008543JCVI_TKOH_0014399.7100.0 / 100.0Strict
TkA03G360730LXL04_008542JCVI_TKOH_0014373.7100.0 / 96.049Review
TkA03G360830LXL04_008541JCVI_TKOH_0014399.8100.0 / 100.0Strict
TkA03G361470LXL04_008537JCVI_TKOH_00143100.0100.0 / 72.162Probable
TkA03G362430LXL04_008534JCVI_TKOH_00143100.064.082 / 34.812Review
TkA03G362500LXL04_008532JCVI_TKOH_0014377.6100.0 / 74.733Complex
TkA03G362820LXL04_008530JCVI_TKOH_0014399.9100.0 / 100.0Complex
TkA03G362830LXL04_008529JCVI_TKOH_0014399.7100.0 / 84.384Strict
TkA03G362870LXL04_008528JCVI_TKOH_0014398.799.361 / 96.285Complex
TkA03G363280LXL04_008526JCVI_TKOH_0014399.3100.0 / 100.0Complex
TkA03G363320LXL04_008521JCVI_TKOH_0014399.2100.0 / 100.0Strict
TkA03G363390LXL04_008519JCVI_TKOH_0014399.8100.0 / 100.0Strict
TkA03G363440LXL04_008517JCVI_TKOH_0014392.6100.0 / 100.0Probable
TkA03G363510LXL04_008515JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G363710LXL04_008514JCVI_TKOH_0014399.3100.0 / 82.716Complex
TkA03G363870LXL04_008511JCVI_TKOH_0014397.973.077 / 10.894Complex
TkA03G363880LXL04_008510JCVI_TKOH_0014387.2100.0 / 100.0Review
TkA03G364060LXL04_008506JCVI_TKOH_00143100.090.728 / 56.379Review
TkA03G364250LXL04_008502JCVI_TKOH_0014368.399.134 / 68.561Complex
TkA03G364720LXL04_008501JCVI_TKOH_0014398.9100.0 / 100.0Complex
TkA03G365650LXL04_008497JCVI_TKOH_00143100.094.545 / 47.926Review
TkA03G365820LXL04_008497JCVI_TKOH_00143100.094.545 / 47.926Review
TkA03G365920LXL04_008496JCVI_TKOH_00143100.0100.0 / 100.0Complex
TkA03G365930LXL04_008495JCVI_TKOH_0014399.797.882 / 96.378Complex
TkA03G366720LXL04_008491JCVI_TKOH_0014399.192.562 / 73.684Complex
TkA03G366870LXL04_008490JCVI_TKOH_0014389.498.611 / 38.639Review
TkA03G366910LXL04_008489JCVI_TKOH_0014399.5100.0 / 86.417Strict
TkA03G366920LXL04_008488JCVI_TKOH_0014399.167.188 / 66.978Review
TkA03G366950LXL04_008487JCVI_TKOH_0014399.1100.0 / 92.386Strict
TkA03G367080LXL04_008485JCVI_TKOH_0014398.9100.0 / 100.0Strict
TkA03G367500LXL04_008484JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G367510LXL04_008483JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G367730LXL04_008482JCVI_TKOH_0014399.7100.0 / 100.0Complex
TkA03G367750LXL04_008481JCVI_TKOH_0014396.4100.0 / 15.973Review
TkA03G367760LXL04_008481JCVI_TKOH_0014396.5100.0 / 76.373Probable
TkA03G367880LXL04_008479JCVI_TKOH_0014397.583.539 / 37.807Review
TkA03G368100LXL04_008475JCVI_TKOH_0014398.999.296 / 88.125Strict
TkA03G368140LXL04_008474JCVI_TKOH_0014399.7100.0 / 100.0Strict
TkA03G368240LXL04_008472JCVI_TKOH_0014398.384.672 / 46.586Review
TkA03G368760LXL04_008469JCVI_TKOH_0014399.448.603 / 64.207Complex
TkA03G368770LXL04_008469JCVI_TKOH_00143100.0100.0 / 32.288Review
TkA03G368820LXL04_008468JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G369120LXL04_008467JCVI_TKOH_0014399.6100.0 / 82.968Strict
TkA03G369200LXL04_008466JCVI_TKOH_0014387.0100.0 / 94.928Review
TkA03G369670LXL04_008464JCVI_TKOH_0014399.499.422 / 99.422Strict
TkA03G369680LXL04_008463JCVI_TKOH_0014399.3100.0 / 100.0Strict
TkA03G370070LXL04_008462JCVI_TKOH_0014362.666.26 / 43.662Complex