Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00305
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 207
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00305

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00305 Chr07 31970319-44426349 Chr06 32211273-47020560 mixed High 200 anchors
Chr07 31970319-44426349 Chr06 32211273-47020560 JCVI_TKOH_00305 · 207 gene pairs TkA07G123290 | LXL04_028135 | 98.8% | RBH_high_identity_coverage_synteny | Strict TkA07G123310 | LXL04_028136 | 98.9% | RBH_sequence_supported | Probable TkA07G124200 | LXL04_028140 | 99.4% | RBH_high_identity_coverage_synteny | Strict TkA07G124230 | LXL04_028142 | 97.7% | RBH_high_identity_coverage_synteny | Strict TkA07G124470 | LXL04_028145 | 92.0% | non_reciprocal_best_hit | Complex TkA07G124610 | LXL04_028145 | 95.3% | sequence_supported_annotation_or_model_conflict | Review TkA07G124720 | LXL04_028147 | 79.4% | non_reciprocal_best_hit | Complex TkA07G124990 | LXL04_028147 | 92.1% | non_reciprocal_best_hit | Complex TkA07G125520 | LXL04_028148 | 98.4% | RBH_high_identity_coverage_synteny | Strict TkA07G125530 | LXL04_028150 | 86.7% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA07G125540 | LXL04_028151 | 97.3% | multi_source_to_OH1004 | Complex TkA07G125550 | LXL04_028152 | 90.2% | RBH_sequence_supported | Probable
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00305 Chr07:31970319-44426349 Chr06:32211273-47020560 mixed 207 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 207 · Showing 1–200 · Page 1/2

TkA07G123290 → LXL04_028135
98.8%
TkA07G123310 → LXL04_028136
98.9%
TkA07G124200 → LXL04_028140
99.4%
TkA07G124230 → LXL04_028142
97.7%
TkA07G124470 → LXL04_028145
92.0%
TkA07G124610 → LXL04_028145
95.3%
TkA07G124720 → LXL04_028147
79.4%
TkA07G124990 → LXL04_028147
92.1%
TkA07G125520 → LXL04_028148
98.4%
TkA07G125530 → LXL04_028150
86.7%
TkA07G125540 → LXL04_028151
97.3%
TkA07G125550 → LXL04_028152
90.2%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA07G123290LXL04_028135JCVI_TKOH_0030598.899.709 / 99.709Strict
TkA07G123310LXL04_028136JCVI_TKOH_0030598.972.691 / 98.907Probable
TkA07G124200LXL04_028140JCVI_TKOH_0030599.4100.0 / 100.0Strict
TkA07G124230LXL04_028142JCVI_TKOH_0030597.7100.0 / 94.019Strict
TkA07G124470LXL04_028145JCVI_TKOH_0030592.079.263 / 35.905Complex
TkA07G124610LXL04_028145JCVI_TKOH_0030595.399.623 / 52.324Review
TkA07G124720LXL04_028147JCVI_TKOH_0030579.427.731 / 16.41Complex
TkA07G124990LXL04_028147JCVI_TKOH_0030592.156.296 / 38.974Complex
TkA07G125520LXL04_028148JCVI_TKOH_0030598.4100.0 / 100.0Strict
TkA07G125530LXL04_028150JCVI_TKOH_0030586.757.692 / 34.682Review
TkA07G125540LXL04_028151JCVI_TKOH_0030597.388.69 / 100.0Complex
TkA07G125550LXL04_028152JCVI_TKOH_0030590.2100.0 / 100.0Probable
TkA07G125990LXL04_028155JCVI_TKOH_0030598.759.848 / 58.519Complex
TkA07G126340LXL04_028160JCVI_TKOH_0030599.595.606 / 99.527Complex
TkA07G126660LXL04_028160JCVI_TKOH_0030562.183.758 / 46.215Complex
TkA07G126810LXL04_028163JCVI_TKOH_0030598.698.837 / 54.499Review
TkA07G126920LXL04_028164JCVI_TKOH_0030597.899.782 / 95.021Strict
TkA07G127200LXL04_028171JCVI_TKOH_0030579.534.583 / 61.029Review
TkA07G127280LXL04_028178JCVI_TKOH_0030581.8100.0 / 46.692Complex
TkA07G127290LXL04_028178JCVI_TKOH_0030598.491.729 / 23.062Review
TkA07G127500LXL04_028175JCVI_TKOH_0030596.072.254 / 24.272Complex
TkA07G127680LXL04_028178JCVI_TKOH_0030583.9100.0 / 100.0Complex
TkA07G128980LXL04_028186JCVI_TKOH_0030597.098.521 / 71.002Review
TkA07G129010LXL04_028190JCVI_TKOH_0030587.8100.0 / 100.0Complex
TkA07G129030LXL04_028186JCVI_TKOH_0030595.292.737 / 71.002Complex
TkA07G129460LXL04_028190JCVI_TKOH_0030594.7100.0 / 100.0Review
TkA07G129480LXL04_028186JCVI_TKOH_0030595.596.491 / 70.362Complex
TkA07G129740LXL04_028204JCVI_TKOH_0030594.6100.0 / 22.802Complex
TkA07G130270LXL04_028205JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G130730LXL04_028209JCVI_TKOH_00305100.0100.0 / 100.0Complex
TkA07G131100LXL04_028211JCVI_TKOH_0030598.0100.0 / 100.0Strict
TkA07G131120LXL04_028213JCVI_TKOH_0030599.2100.0 / 100.0Strict
TkA07G131370LXL04_028215JCVI_TKOH_0030599.0100.0 / 100.0Strict
TkA07G131400LXL04_028216JCVI_TKOH_00305100.0100.0 / 100.0Complex
TkA07G131690LXL04_028220JCVI_TKOH_0030599.3100.0 / 99.833Strict
TkA07G131710LXL04_028221JCVI_TKOH_00305100.0100.0 / 100.0Complex
TkA07G131870LXL04_028223JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G131970LXL04_028225JCVI_TKOH_0030592.692.233 / 54.658Complex
TkA07G132240LXL04_028225JCVI_TKOH_0030593.594.69 / 62.112Complex
TkA07G132280LXL04_028228JCVI_TKOH_0030596.997.024 / 34.316Review
TkA07G132300LXL04_028229JCVI_TKOH_0030593.6100.0 / 100.0Probable
TkA07G132320LXL04_028230JCVI_TKOH_0030579.8100.0 / 52.792Review
TkA07G132360LXL04_028231JCVI_TKOH_0030596.597.727 / 68.421Review
TkA07G132470LXL04_028233JCVI_TKOH_00305100.099.369 / 74.118Probable
TkA07G132540LXL04_028234JCVI_TKOH_00305100.0100.0 / 94.397Complex
TkA07G132740LXL04_028236JCVI_TKOH_0030599.293.525 / 58.824Review
TkA07G133210LXL04_028243JCVI_TKOH_0030586.5100.0 / 100.0Review
TkA07G133310LXL04_028247JCVI_TKOH_0030596.4100.0 / 100.0Complex
TkA07G133950LXL04_028250JCVI_TKOH_00305100.0100.0 / 100.0Complex
TkA07G134340LXL04_028256JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G134350LXL04_028255JCVI_TKOH_0030599.685.482 / 85.498Strict
TkA07G134470LXL04_028253JCVI_TKOH_0030599.3100.0 / 100.0Strict
TkA07G134730LXL04_028252JCVI_TKOH_0030596.197.814 / 52.035Review
TkA07G134740LXL04_028250JCVI_TKOH_0030586.5100.0 / 98.837Complex
TkA07G135590LXL04_028257JCVI_TKOH_00305100.083.709 / 65.748Review
TkA07G135730LXL04_028258JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G136030LXL04_028259JCVI_TKOH_00305100.098.246 / 51.376Review
TkA07G137180LXL04_028264JCVI_TKOH_0030599.7100.0 / 100.0Strict
TkA07G137190LXL04_028265JCVI_TKOH_00305100.0100.0 / 85.266Strict
TkA07G137260LXL04_028266JCVI_TKOH_0030599.0100.0 / 100.0Complex
TkA07G137270LXL04_028267JCVI_TKOH_0030599.788.589 / 100.0Complex
TkA07G137420LXL04_028268JCVI_TKOH_0030598.088.696 / 37.363Review
TkA07G137710LXL04_028270JCVI_TKOH_0030597.3100.0 / 94.318Strict
TkA07G137720LXL04_028275JCVI_TKOH_0030598.7100.0 / 100.0Complex
TkA07G137730LXL04_028276JCVI_TKOH_00305100.0100.0 / 100.0Complex
TkA07G137900LXL04_028278JCVI_TKOH_0030596.899.433 / 99.81Complex
TkA07G138510LXL04_028283JCVI_TKOH_0030594.691.194 / 98.495Complex
TkA07G138650LXL04_028283JCVI_TKOH_0030578.297.692 / 89.462Complex
TkA07G138860LXL04_028286JCVI_TKOH_00305100.099.231 / 31.311Review
TkA07G138910LXL04_028286JCVI_TKOH_0030557.7100.0 / 31.311Complex
TkA07G138970LXL04_028287JCVI_TKOH_0030597.3100.0 / 80.214Complex
TkA07G139340LXL04_028286JCVI_TKOH_00305100.099.231 / 31.311Review
TkA07G139380LXL04_028286JCVI_TKOH_0030557.7100.0 / 31.311Complex
TkA07G139440LXL04_028287JCVI_TKOH_0030598.0100.0 / 80.214Complex
TkA07G139660LXL04_028289JCVI_TKOH_00305100.077.673 / 100.0Probable
TkA07G139670LXL04_028291JCVI_TKOH_0030561.7100.0 / 100.0Review
TkA07G139680LXL04_028294JCVI_TKOH_0030599.4100.0 / 37.143Review
TkA07G139720LXL04_028295JCVI_TKOH_0030594.1100.0 / 83.388Probable
TkA07G140530LXL04_028301JCVI_TKOH_0030598.3100.0 / 100.0Strict
TkA07G140890LXL04_028304JCVI_TKOH_0030595.862.281 / 5.134Complex
TkA07G141250LXL04_028311JCVI_TKOH_0030599.084.848 / 40.246Complex
TkA07G141540LXL04_028312JCVI_TKOH_0030591.7100.0 / 98.117Complex
TkA07G141670LXL04_028313JCVI_TKOH_0030597.899.756 / 93.537Strict
TkA07G141750LXL04_028314JCVI_TKOH_0030598.852.5 / 88.421Review
TkA07G141800LXL04_028315JCVI_TKOH_0030599.089.906 / 37.112Review
TkA07G142240LXL04_028316JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G142390LXL04_028317JCVI_TKOH_0030598.887.321 / 100.0Strict
TkA07G142890LXL04_028318JCVI_TKOH_0030582.7100.0 / 100.0Review
TkA07G142940LXL04_028320JCVI_TKOH_00305100.0100.0 / 100.0Complex
TkA07G143330LXL04_028321JCVI_TKOH_0030599.294.321 / 95.262Complex
TkA07G144040LXL04_028324JCVI_TKOH_0030599.295.312 / 90.37Complex
TkA07G144210LXL04_028327JCVI_TKOH_0030593.8100.0 / 100.0Probable
TkA07G144470LXL04_028329JCVI_TKOH_0030593.2100.0 / 47.301Review
TkA07G144560LXL04_028336JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G144610LXL04_028337JCVI_TKOH_0030597.090.65 / 83.942Strict
TkA07G144620LXL04_028338JCVI_TKOH_0030593.689.344 / 37.866Review
TkA07G144630LXL04_028340JCVI_TKOH_0030598.895.465 / 48.897Review
TkA07G144650LXL04_028341JCVI_TKOH_0030585.495.87 / 87.812Review
TkA07G144800LXL04_028344JCVI_TKOH_0030599.6100.0 / 61.662Complex
TkA07G145070LXL04_028345JCVI_TKOH_0030599.388.71 / 100.0Complex
TkA07G145370LXL04_028346JCVI_TKOH_00305100.0100.0 / 90.21Strict
TkA07G145540LXL04_028352JCVI_TKOH_0030585.2100.0 / 82.993Complex
TkA07G145700LXL04_028353JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G145710LXL04_028354JCVI_TKOH_0030593.5100.0 / 100.0Probable
TkA07G145940LXL04_028355JCVI_TKOH_0030599.3100.0 / 100.0Strict
TkA07G145970LXL04_028356JCVI_TKOH_00305100.0100.0 / 100.0Review
TkA07G146180LXL04_028358JCVI_TKOH_0030598.098.026 / 88.166Review
TkA07G146210LXL04_028359JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G146430LXL04_028360JCVI_TKOH_0030598.594.964 / 40.244Review
TkA07G146830LXL04_028362JCVI_TKOH_0030587.090.039 / 90.133Review
TkA07G146900LXL04_028364JCVI_TKOH_0030599.6100.0 / 100.0Complex
TkA07G147380LXL04_028368JCVI_TKOH_0030588.391.22 / 76.779Complex
TkA07G147410LXL04_028369JCVI_TKOH_0030597.197.842 / 28.099Review
TkA07G147680LXL04_028368JCVI_TKOH_0030588.891.22 / 76.779Complex
TkA07G147800LXL04_028369JCVI_TKOH_0030596.889.017 / 31.818Review
TkA07G147820LXL04_028371JCVI_TKOH_0030598.499.666 / 97.513Strict
TkA07G147830LXL04_028372JCVI_TKOH_0030598.478.601 / 99.479Probable
TkA07G147970LXL04_028373JCVI_TKOH_0030599.898.089 / 86.913Review
TkA07G148080LXL04_028375JCVI_TKOH_0030598.3100.0 / 100.0Strict
TkA07G148110LXL04_028376JCVI_TKOH_0030597.9100.0 / 97.174Complex
TkA07G148270LXL04_028377JCVI_TKOH_00305100.0100.0 / 100.0Review
TkA07G148280LXL04_028378JCVI_TKOH_0030599.3100.0 / 100.0Complex
TkA07G148390LXL04_028380JCVI_TKOH_00305100.097.464 / 31.722Review
TkA07G148400LXL04_028380JCVI_TKOH_0030597.18.537 / 4.127Complex
TkA07G148600LXL04_028381JCVI_TKOH_0030599.5100.0 / 100.0Strict
TkA07G148660LXL04_028382JCVI_TKOH_0030597.9100.0 / 100.0Strict
TkA07G148840LXL04_028383JCVI_TKOH_00305100.098.765 / 75.235Probable
TkA07G149010LXL04_028384JCVI_TKOH_0030599.3100.0 / 40.157Review
TkA07G150200LXL04_028387JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G150760LXL04_028390JCVI_TKOH_00305100.0100.0 / 100.0Review
TkA07G151180LXL04_028391JCVI_TKOH_00305100.0100.0 / 100.0Complex
TkA07G151500LXL04_028392JCVI_TKOH_0030596.194.118 / 84.768Strict
TkA07G151610LXL04_028396JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G151720LXL04_028397JCVI_TKOH_0030599.4100.0 / 100.0Strict
TkA07G151730LXL04_028398JCVI_TKOH_0030595.968.966 / 73.604Review
TkA07G151800LXL04_028400JCVI_TKOH_0030597.2100.0 / 67.671Review
TkA07G151810LXL04_028399JCVI_TKOH_0030599.8100.0 / 100.0Strict
TkA07G151870LXL04_028401JCVI_TKOH_0030598.3100.0 / 100.0Strict
TkA07G151920LXL04_028402JCVI_TKOH_0030594.883.103 / 63.476Review
TkA07G152220LXL04_028405JCVI_TKOH_0030599.0100.0 / 100.0Strict
TkA07G152990LXL04_028407JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G153780LXL04_028412JCVI_TKOH_0030582.7100.0 / 100.0Complex
TkA07G154650LXL04_028421JCVI_TKOH_0030598.9100.0 / 61.092Review
TkA07G155590LXL04_028433JCVI_TKOH_0030598.6100.0 / 100.0Complex
TkA07G156200LXL04_028440JCVI_TKOH_0030599.7100.0 / 95.489Strict
TkA07G156340LXL04_028441JCVI_TKOH_0030593.3100.0 / 100.0Complex
TkA07G156580LXL04_028442JCVI_TKOH_0030599.0100.0 / 90.265Strict
TkA07G156620LXL04_028443JCVI_TKOH_0030599.6100.0 / 54.878Review
TkA07G156630LXL04_028443JCVI_TKOH_0030599.4100.0 / 39.268Review
TkA07G156820LXL04_028444JCVI_TKOH_0030599.1100.0 / 100.0Strict
TkA07G157440LXL04_028451JCVI_TKOH_0030597.888.065 / 48.319Review
TkA07G157450LXL04_028452JCVI_TKOH_0030597.8100.0 / 100.0Strict
TkA07G157460LXL04_028453JCVI_TKOH_0030599.1100.0 / 100.0Strict
TkA07G157520LXL04_028456JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G157530LXL04_028457JCVI_TKOH_00305100.049.04 / 98.516Review
TkA07G158090LXL04_028458JCVI_TKOH_0030590.568.61 / 37.619Complex
TkA07G158480LXL04_028462JCVI_TKOH_0030599.8100.0 / 100.0Review
TkA07G158870LXL04_028466JCVI_TKOH_0030579.564.807 / 56.338Complex
TkA07G158930LXL04_028468JCVI_TKOH_0030596.6100.0 / 52.518Review
TkA07G160310LXL04_028474JCVI_TKOH_0030599.1100.0 / 100.0Review
TkA07G160330LXL04_028475JCVI_TKOH_00305100.0100.0 / 100.0Review
TkA07G160660LXL04_028476JCVI_TKOH_0030595.6100.0 / 100.0Review
TkA07G161300LXL04_028478JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G161340LXL04_028479JCVI_TKOH_0030580.1100.0 / 100.0Review
TkA07G161890LXL04_028484JCVI_TKOH_0030590.4100.0 / 80.769Probable
TkA07G161900LXL04_028485JCVI_TKOH_0030593.8100.0 / 57.052Complex
TkA07G162000LXL04_028486JCVI_TKOH_0030598.8100.0 / 53.958Review
TkA07G162010LXL04_028485JCVI_TKOH_0030594.0100.0 / 57.052Complex
TkA07G162070LXL04_028486JCVI_TKOH_0030598.4100.0 / 100.0Complex
TkA07G163840LXL04_028502JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G163870LXL04_028505JCVI_TKOH_0030599.4100.0 / 73.516Complex
TkA07G163990LXL04_028506JCVI_TKOH_00305100.0100.0 / 66.667Review
TkA07G164080LXL04_028507JCVI_TKOH_0030599.0100.0 / 100.0Strict
TkA07G164300LXL04_028508JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G164320LXL04_028509JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G164330LXL04_028510JCVI_TKOH_0030590.799.624 / 94.788Probable
TkA07G164790LXL04_028513JCVI_TKOH_00305100.0100.0 / 95.2Strict
TkA07G164800LXL04_028514JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G164940LXL04_028515JCVI_TKOH_0030598.089.381 / 89.911Strict
TkA07G165100LXL04_028518JCVI_TKOH_0030599.5100.0 / 100.0Complex
TkA07G165110LXL04_028519JCVI_TKOH_0030598.7100.0 / 100.0Strict
TkA07G165310LXL04_028520JCVI_TKOH_0030598.1100.0 / 100.0Strict
TkA07G165330LXL04_028521JCVI_TKOH_00305100.0100.0 / 100.0Complex
TkA07G165370LXL04_028521JCVI_TKOH_00305100.0100.0 / 100.0Complex
TkA07G166020LXL04_028524JCVI_TKOH_0030547.594.163 / 37.364Complex
TkA07G166030LXL04_028524JCVI_TKOH_0030577.598.477 / 17.907Complex
TkA07G166140LXL04_028533JCVI_TKOH_0030599.895.962 / 77.692Probable
TkA07G166540LXL04_028535JCVI_TKOH_0030595.6100.0 / 100.0Strict
TkA07G166690LXL04_028537JCVI_TKOH_0030598.3100.0 / 92.627Strict
TkA07G166700LXL04_028538JCVI_TKOH_0030590.3100.0 / 97.317Probable
TkA07G167510LXL04_028539JCVI_TKOH_0030587.7100.0 / 99.239Review
TkA07G168730LXL04_028540JCVI_TKOH_0030599.597.222 / 100.0Strict
TkA07G168740LXL04_028541JCVI_TKOH_0030584.5100.0 / 100.0Review
TkA07G168860LXL04_028542JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G168880LXL04_028544JCVI_TKOH_00305100.0100.0 / 72.289Probable
TkA07G169010LXL04_028547JCVI_TKOH_0030599.5100.0 / 100.0Strict
TkA07G169020LXL04_028548JCVI_TKOH_00305100.0100.0 / 100.0Strict
TkA07G169050LXL04_028549JCVI_TKOH_0030598.596.709 / 62.278Complex
TkA07G169060LXL04_028550JCVI_TKOH_0030591.4100.0 / 100.0Probable
TkA07G169220LXL04_028552JCVI_TKOH_0030599.7100.0 / 100.0Complex