同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00242
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 113
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00242

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00242 Chr05 91168869-96801159 Chr04 124752550-129435728 mixed High 113 anchors
Chr05 91168869-96801159 Chr04 124752550-129435728 JCVI_TKOH_00242 · 113 gene pairs TkA05G367090 | LXL04_021222 | 99.3% | non_reciprocal_best_hit | Complex TkA05G367200 | LXL04_021215 | 94.1% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA05G367290 | LXL04_021216 | 89.0% | non_reciprocal_best_hit | Complex TkA05G367690 | LXL04_021220 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA05G368130 | LXL04_021222 | 100.0% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA05G368450 | LXL04_021224 | 100.0% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA05G368890 | LXL04_021224 | 100.0% | non_reciprocal_best_hit | Complex TkA05G369110 | LXL04_021229 | 97.0% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA05G369150 | LXL04_021230 | 77.5% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA05G369250 | LXL04_021231 | 100.0% | non_reciprocal_best_hit | Complex TkA05G369260 | LXL04_021232 | 99.7% | RBH_high_identity_coverage_synteny | Strict TkA05G369280 | LXL04_021233 | 99.3% | RBH_high_identity_coverage_synteny | Strict
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00242 Chr05:91168869-96801159 Chr04:124752550-129435728 mixed 113 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 113 · 当前范围 1–113 · 页码 1/1

TkA05G367090 → LXL04_021222
99.3%
TkA05G367200 → LXL04_021215
94.1%
TkA05G367290 → LXL04_021216
89.0%
TkA05G367690 → LXL04_021220
100.0%
TkA05G368130 → LXL04_021222
100.0%
TkA05G368450 → LXL04_021224
100.0%
TkA05G368890 → LXL04_021224
100.0%
TkA05G369110 → LXL04_021229
97.0%
TkA05G369150 → LXL04_021230
77.5%
TkA05G369250 → LXL04_021231
100.0%
TkA05G369260 → LXL04_021232
99.7%
TkA05G369280 → LXL04_021233
99.3%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA05G367090LXL04_021222JCVI_TKOH_0024299.3100.0 / 100.0Complex
TkA05G367200LXL04_021215JCVI_TKOH_0024294.1100.0 / 50.599待复核
TkA05G367290LXL04_021216JCVI_TKOH_0024289.070.36 / 49.735Complex
TkA05G367690LXL04_021220JCVI_TKOH_00242100.0100.0 / 100.0Strict
TkA05G368130LXL04_021222JCVI_TKOH_00242100.0100.0 / 100.0待复核
TkA05G368450LXL04_021224JCVI_TKOH_00242100.0100.0 / 78.351待复核
TkA05G368890LXL04_021224JCVI_TKOH_00242100.0100.0 / 78.351Complex
TkA05G369110LXL04_021229JCVI_TKOH_0024297.0100.0 / 66.447待复核
TkA05G369150LXL04_021230JCVI_TKOH_0024277.597.75 / 85.111待复核
TkA05G369250LXL04_021231JCVI_TKOH_00242100.0100.0 / 80.159Complex
TkA05G369260LXL04_021232JCVI_TKOH_0024299.7100.0 / 100.0Strict
TkA05G369280LXL04_021233JCVI_TKOH_0024299.3100.0 / 100.0Strict
TkA05G369710LXL04_021236JCVI_TKOH_0024277.793.525 / 88.77待复核
TkA05G370710LXL04_021243JCVI_TKOH_00242100.0100.0 / 100.0Complex
TkA05G371450LXL04_021247JCVI_TKOH_00242100.0100.0 / 100.0Strict
TkA05G371500LXL04_021248JCVI_TKOH_0024299.197.368 / 28.316待复核
TkA05G372100LXL04_021254JCVI_TKOH_0024298.699.378 / 86.468Complex
TkA05G372460LXL04_021255JCVI_TKOH_0024299.8100.0 / 100.0Strict
TkA05G372780LXL04_021256JCVI_TKOH_0024299.496.471 / 36.771待复核
TkA05G372830LXL04_021257JCVI_TKOH_0024287.4100.0 / 100.0待复核
TkA05G373630LXL04_021262JCVI_TKOH_0024270.958.333 / 98.319待复核
TkA05G373640LXL04_021264JCVI_TKOH_0024282.3100.0 / 87.427Complex
TkA05G373700LXL04_021266JCVI_TKOH_0024298.8100.0 / 85.312Strict
TkA05G373830LXL04_021268JCVI_TKOH_0024299.4100.0 / 100.0Complex
TkA05G373840LXL04_021269JCVI_TKOH_0024292.8100.0 / 98.364Probable
TkA05G374480LXL04_021270JCVI_TKOH_0024284.1100.0 / 100.0Complex
TkA05G374570LXL04_021276JCVI_TKOH_0024284.8100.0 / 99.081Complex
TkA05G375040LXL04_021270JCVI_TKOH_0024285.4100.0 / 100.0Complex
TkA05G375160LXL04_021271JCVI_TKOH_0024283.498.03 / 82.783Complex
TkA05G375880LXL04_021283JCVI_TKOH_0024298.094.286 / 74.717Complex
TkA05G375980LXL04_021276JCVI_TKOH_0024285.0100.0 / 99.081待复核
TkA05G375990LXL04_021277JCVI_TKOH_0024281.269.672 / 76.344待复核
TkA05G376270LXL04_021278JCVI_TKOH_0024298.281.955 / 29.301Complex
TkA05G376600LXL04_021273JCVI_TKOH_0024267.695.506 / 31.33Complex
TkA05G376630LXL04_021283JCVI_TKOH_0024299.284.452 / 90.189Complex
TkA05G376640LXL04_021275JCVI_TKOH_0024290.866.667 / 86.207待复核
TkA05G376710LXL04_021276JCVI_TKOH_00242100.085.556 / 28.309待复核
TkA05G377050LXL04_021278JCVI_TKOH_0024266.4100.0 / 100.0待复核
TkA05G377100LXL04_021280JCVI_TKOH_00242100.097.987 / 84.393Complex
TkA05G377350LXL04_021283JCVI_TKOH_0024298.9100.0 / 100.0Complex
TkA05G377580LXL04_021285JCVI_TKOH_0024295.397.959 / 86.486Strict
TkA05G377650LXL04_021286JCVI_TKOH_00242100.099.353 / 96.389Complex
TkA05G377690LXL04_021289JCVI_TKOH_00242100.0100.0 / 93.573Complex
TkA05G377700LXL04_021289JCVI_TKOH_0024254.381.663 / 86.632Complex
TkA05G377820LXL04_021290JCVI_TKOH_0024246.5100.0 / 100.0Complex
TkA05G377930LXL04_021291JCVI_TKOH_0024289.889.716 / 43.036待复核
TkA05G378080LXL04_021292JCVI_TKOH_0024299.5100.0 / 100.0Strict
TkA05G378120LXL04_021294JCVI_TKOH_0024270.5100.0 / 100.0待复核
TkA05G378140LXL04_021296JCVI_TKOH_00242100.082.609 / 88.372Complex
TkA05G378290LXL04_021298JCVI_TKOH_0024298.7100.0 / 100.0待复核
TkA05G378350LXL04_021302JCVI_TKOH_0024298.6100.0 / 100.0Strict
TkA05G378360LXL04_021303JCVI_TKOH_0024299.7100.0 / 100.0Strict
TkA05G378540LXL04_021304JCVI_TKOH_00242100.0100.0 / 100.0待复核
TkA05G378560LXL04_021305JCVI_TKOH_0024248.595.098 / 37.891Complex
TkA05G378660LXL04_021305JCVI_TKOH_0024299.4100.0 / 94.922Complex
TkA05G378680LXL04_021306JCVI_TKOH_0024296.398.61 / 98.595Strict
TkA05G378720LXL04_021309JCVI_TKOH_0024299.8100.0 / 100.0Strict
TkA05G378730LXL04_021310JCVI_TKOH_0024297.5100.0 / 58.01待复核
TkA05G378890LXL04_021311JCVI_TKOH_0024299.5100.0 / 54.015待复核
TkA05G379070LXL04_021312JCVI_TKOH_0024299.6100.0 / 58.355待复核
TkA05G379420LXL04_021315JCVI_TKOH_0024295.3100.0 / 90.83Strict
TkA05G379470LXL04_021316JCVI_TKOH_0024299.1100.0 / 100.0Strict
TkA05G380190LXL04_021318JCVI_TKOH_0024299.0100.0 / 100.0Strict
TkA05G380210LXL04_021319JCVI_TKOH_0024293.899.373 / 99.747Probable
TkA05G380300LXL04_021322JCVI_TKOH_0024299.4100.0 / 100.0Strict
TkA05G380690LXL04_021327JCVI_TKOH_00242100.0100.0 / 96.552Strict
TkA05G380700LXL04_021328JCVI_TKOH_0024299.1100.0 / 100.0Strict
TkA05G380730LXL04_021329JCVI_TKOH_00242100.0100.0 / 100.0待复核
TkA05G380910LXL04_021332JCVI_TKOH_0024299.5100.0 / 100.0Strict
TkA05G381190LXL04_021336JCVI_TKOH_0024297.793.362 / 99.849Complex
TkA05G381260LXL04_021337JCVI_TKOH_0024298.190.756 / 60.335Complex
TkA05G381510LXL04_021338JCVI_TKOH_0024298.4100.0 / 95.639Strict
TkA05G381530LXL04_021339JCVI_TKOH_0024298.7100.0 / 100.0Strict
TkA05G381940LXL04_021348JCVI_TKOH_0024299.1100.0 / 100.0Strict
TkA05G382020LXL04_021350JCVI_TKOH_0024289.1100.0 / 82.105Complex
TkA05G383050LXL04_021356JCVI_TKOH_0024299.7100.0 / 100.0Strict
TkA05G383390LXL04_021359JCVI_TKOH_0024288.4100.0 / 100.0待复核
TkA05G383520LXL04_021360JCVI_TKOH_00242100.0100.0 / 100.0Strict
TkA05G383630LXL04_021361JCVI_TKOH_00242100.0100.0 / 100.0Strict
TkA05G383700LXL04_021364JCVI_TKOH_00242100.0100.0 / 100.0Complex
TkA05G384080LXL04_021387JCVI_TKOH_0024289.2100.0 / 100.0Complex
TkA05G384120LXL04_021386JCVI_TKOH_0024295.096.648 / 99.808Complex
TkA05G384130LXL04_021383JCVI_TKOH_00242100.0100.0 / 63.09Complex
TkA05G384160LXL04_021382JCVI_TKOH_00242100.0100.0 / 100.0Complex
TkA05G384170LXL04_021381JCVI_TKOH_0024269.5100.0 / 100.0待复核
TkA05G384220LXL04_021378JCVI_TKOH_00242100.0100.0 / 100.0Complex
TkA05G384610LXL04_021366JCVI_TKOH_00242100.077.451 / 53.02待复核
TkA05G384860LXL04_021370JCVI_TKOH_00242100.0100.0 / 100.0Strict
TkA05G384900LXL04_021371JCVI_TKOH_00242100.0100.0 / 100.0Complex
TkA05G384910LXL04_021372JCVI_TKOH_0024295.590.164 / 64.327Complex
TkA05G385000LXL04_021373JCVI_TKOH_0024284.8100.0 / 100.0待复核
TkA05G385260LXL04_021375JCVI_TKOH_0024293.290.964 / 75.587Probable
TkA05G385610LXL04_021378JCVI_TKOH_00242100.0100.0 / 100.0Complex
TkA05G385660LXL04_021382JCVI_TKOH_0024299.5100.0 / 100.0Complex
TkA05G385680LXL04_021383JCVI_TKOH_0024299.1100.0 / 100.0Complex
TkA05G385690LXL04_021386JCVI_TKOH_0024296.0100.0 / 91.731Complex
TkA05G385740LXL04_021387JCVI_TKOH_0024290.8100.0 / 100.0Complex
TkA05G386180LXL04_021389JCVI_TKOH_0024299.1100.0 / 94.215Complex
TkA05G386190LXL04_021390JCVI_TKOH_0024292.060.417 / 24.143Complex
TkA05G386380LXL04_021396JCVI_TKOH_00242100.050.714 / 41.52Complex
TkA05G386440LXL04_021397JCVI_TKOH_00242100.0100.0 / 100.0Strict
TkA05G387240LXL04_021401JCVI_TKOH_0024297.6100.0 / 100.0Strict
TkA05G388420LXL04_021409JCVI_TKOH_0024299.699.582 / 98.96Complex
TkA05G388430LXL04_021410JCVI_TKOH_00242100.097.163 / 23.702待复核
TkA05G388470LXL04_021411JCVI_TKOH_0024298.996.043 / 64.32Complex
TkA05G388540LXL04_021412JCVI_TKOH_0024299.459.344 / 38.841Complex
TkA05G388560LXL04_021412JCVI_TKOH_0024297.855.901 / 19.313Complex
TkA05G389060LXL04_021414JCVI_TKOH_0024270.573.585 / 21.007Complex
TkA05G389080LXL04_021414JCVI_TKOH_0024298.899.401 / 28.819待复核
TkA05G389340LXL04_021415JCVI_TKOH_0024299.7100.0 / 100.0Strict
TkA05G389410LXL04_021416JCVI_TKOH_0024299.7100.0 / 100.0Strict
TkA05G389420LXL04_021418JCVI_TKOH_00242100.0100.0 / 87.143Complex
TkA05G389450LXL04_021419JCVI_TKOH_0024298.4100.0 / 100.0Strict