Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00339
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 409
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00339

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00339 Chr08 13961069-22905882 Chr04 11711844-19790939 mixed High 200 anchors
Chr08 13961069-22905882 Chr04 11711844-19790939 JCVI_TKOH_00339 · 409 gene pairs TkA08G072090 | LXL04_018610 | 100.0% | non_reciprocal_best_hit | Complex TkA08G072110 | LXL04_018611 | 92.7% | RBH_sequence_supported | Probable TkA08G072120 | LXL04_018612 | 99.6% | multi_source_to_OH1004 | Complex TkA08G072160 | LXL04_018613 | 94.2% | RBH_sequence_supported | Probable TkA08G072300 | LXL04_018614 | 99.3% | RBH_high_identity_coverage_synteny | Strict TkA08G072350 | LXL04_018615 | 97.2% | RBH_high_identity_coverage_synteny | Strict TkA08G072360 | LXL04_018616 | 95.3% | sequence_supported_annotation_or_model_conflict | Review TkA08G072370 | LXL04_018617 | 97.4% | RBH_high_identity_coverage_synteny | Strict TkA08G072390 | LXL04_018618 | 56.8% | non_reciprocal_best_hit | Complex TkA08G072410 | LXL04_018618 | 91.0% | non_reciprocal_best_hit | Complex TkA08G072430 | LXL04_018620 | 99.3% | RBH_high_identity_coverage_synteny | Strict TkA08G072480 | LXL04_018622 | 98.9% | RBH_high_identity_coverage_synteny | Strict
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00339 Chr08:13961069-22905882 Chr04:11711844-19790939 mixed 409 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 409 · Showing 201–400 · Page 2/3

TkA08G072090 → LXL04_018610
100.0%
TkA08G072110 → LXL04_018611
92.7%
TkA08G072120 → LXL04_018612
99.6%
TkA08G072160 → LXL04_018613
94.2%
TkA08G072300 → LXL04_018614
99.3%
TkA08G072350 → LXL04_018615
97.2%
TkA08G072360 → LXL04_018616
95.3%
TkA08G072370 → LXL04_018617
97.4%
TkA08G072390 → LXL04_018618
56.8%
TkA08G072410 → LXL04_018618
91.0%
TkA08G072430 → LXL04_018620
99.3%
TkA08G072480 → LXL04_018622
98.9%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA08G072090LXL04_018610JCVI_TKOH_00339100.0100.0 / 80.0Complex
TkA08G072110LXL04_018611JCVI_TKOH_0033992.7100.0 / 100.0Probable
TkA08G072120LXL04_018612JCVI_TKOH_0033999.6100.0 / 100.0Complex
TkA08G072160LXL04_018613JCVI_TKOH_0033994.295.489 / 95.737Probable
TkA08G072300LXL04_018614JCVI_TKOH_0033999.381.967 / 100.0Strict
TkA08G072350LXL04_018615JCVI_TKOH_0033997.2100.0 / 83.614Strict
TkA08G072360LXL04_018616JCVI_TKOH_0033995.3100.0 / 100.0Review
TkA08G072370LXL04_018617JCVI_TKOH_0033997.4100.0 / 83.75Strict
TkA08G072390LXL04_018618JCVI_TKOH_0033956.896.078 / 35.238Complex
TkA08G072410LXL04_018618JCVI_TKOH_0033991.099.405 / 49.796Complex
TkA08G072430LXL04_018620JCVI_TKOH_0033999.3100.0 / 100.0Strict
TkA08G072480LXL04_018622JCVI_TKOH_0033998.9100.0 / 100.0Strict
TkA08G072490LXL04_018623JCVI_TKOH_00339100.097.614 / 87.211Complex
TkA08G072550LXL04_018626JCVI_TKOH_00339100.099.627 / 99.072Strict
TkA08G072600LXL04_018627JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G073070LXL04_018632JCVI_TKOH_0033995.9100.0 / 68.224Review
TkA08G073110LXL04_018634JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G073440LXL04_018636JCVI_TKOH_0033988.0100.0 / 88.235Review
TkA08G073670LXL04_018637JCVI_TKOH_0033998.571.935 / 100.0Probable
TkA08G073760LXL04_018638JCVI_TKOH_0033977.433.696 / 60.194Complex
TkA08G073770LXL04_018638JCVI_TKOH_0033997.144.541 / 99.029Review
TkA08G073870LXL04_018638JCVI_TKOH_0033977.433.696 / 60.194Complex
TkA08G074120LXL04_018640JCVI_TKOH_0033999.579.848 / 100.0Complex
TkA08G074130LXL04_018641JCVI_TKOH_0033999.499.363 / 49.263Review
TkA08G075270LXL04_018642JCVI_TKOH_0033995.996.903 / 45.127Review
TkA08G075280LXL04_018643JCVI_TKOH_00339100.0100.0 / 100.0Complex
TkA08G075510LXL04_018645JCVI_TKOH_0033999.3100.0 / 100.0Review
TkA08G075560LXL04_018647JCVI_TKOH_00339100.0100.0 / 100.0Review
TkA08G075670LXL04_018648JCVI_TKOH_00339100.071.693 / 71.693Probable
TkA08G075680LXL04_018649JCVI_TKOH_00339100.0100.0 / 100.0Review
TkA08G075720LXL04_018651JCVI_TKOH_00339100.0100.0 / 100.0Complex
TkA08G075830LXL04_018653JCVI_TKOH_00339100.0100.0 / 100.0Complex
TkA08G075950LXL04_018654JCVI_TKOH_0033998.894.737 / 86.631Complex
TkA08G075990LXL04_018656JCVI_TKOH_00339100.092.754 / 78.528Complex
TkA08G076030LXL04_018645JCVI_TKOH_00339100.0100.0 / 100.0Review
TkA08G076260LXL04_018647JCVI_TKOH_00339100.0100.0 / 100.0Review
TkA08G076390LXL04_018648JCVI_TKOH_00339100.099.412 / 44.709Review
TkA08G076400LXL04_018649JCVI_TKOH_00339100.0100.0 / 99.333Review
TkA08G076430LXL04_018650JCVI_TKOH_0033948.592.553 / 84.936Complex
TkA08G076450LXL04_018651JCVI_TKOH_00339100.0100.0 / 71.713Complex
TkA08G076490LXL04_018653JCVI_TKOH_00339100.0100.0 / 100.0Complex
TkA08G076620LXL04_018654JCVI_TKOH_0033998.194.737 / 86.631Complex
TkA08G076690LXL04_018656JCVI_TKOH_0033999.8100.0 / 100.0Complex
TkA08G076700LXL04_018657JCVI_TKOH_0033990.5100.0 / 100.0Probable
TkA08G076840LXL04_018658JCVI_TKOH_0033996.873.256 / 70.0Complex
TkA08G076870LXL04_018659JCVI_TKOH_00339100.0100.0 / 85.147Complex
TkA08G076880LXL04_018660JCVI_TKOH_00339100.0100.0 / 100.0Complex
TkA08G076890LXL04_018661JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G076900LXL04_018662JCVI_TKOH_0033986.7100.0 / 100.0Complex
TkA08G076930LXL04_018664JCVI_TKOH_0033997.798.12 / 51.378Review
TkA08G076990LXL04_018665JCVI_TKOH_0033995.312.749 / 5.272Review
TkA08G077020LXL04_018667JCVI_TKOH_0033994.2100.0 / 100.0Probable
TkA08G077180LXL04_018668JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G077190LXL04_018669JCVI_TKOH_0033965.6100.0 / 86.378Review
TkA08G077230LXL04_018670JCVI_TKOH_00339100.0100.0 / 100.0Review
TkA08G077620LXL04_018672JCVI_TKOH_0033996.4100.0 / 99.746Strict
TkA08G077630LXL04_018673JCVI_TKOH_0033999.8100.0 / 100.0Strict
TkA08G077710LXL04_018674JCVI_TKOH_0033999.3100.0 / 100.0Review
TkA08G077720LXL04_018675JCVI_TKOH_00339100.062.474 / 62.213Review
TkA08G077750LXL04_018676JCVI_TKOH_0033999.8100.0 / 98.084Strict
TkA08G077820LXL04_018677JCVI_TKOH_0033999.580.508 / 40.34Review
TkA08G077830LXL04_018678JCVI_TKOH_0033999.6100.0 / 100.0Strict
TkA08G077840LXL04_018679JCVI_TKOH_00339100.0100.0 / 100.0Review
TkA08G077850LXL04_018680JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G077860LXL04_018681JCVI_TKOH_0033998.895.367 / 91.271Complex
TkA08G077930LXL04_018683JCVI_TKOH_0033999.6100.0 / 100.0Strict
TkA08G077940LXL04_018684JCVI_TKOH_0033996.3100.0 / 100.0Strict
TkA08G077950LXL04_018685JCVI_TKOH_0033997.5100.0 / 100.0Strict
TkA08G077980LXL04_018687JCVI_TKOH_0033999.5100.0 / 100.0Review
TkA08G077990LXL04_018688JCVI_TKOH_0033999.4100.0 / 100.0Strict
TkA08G078000LXL04_018689JCVI_TKOH_0033999.788.286 / 88.286Strict
TkA08G078040LXL04_018691JCVI_TKOH_0033950.797.333 / 40.984Review
TkA08G078060LXL04_018692JCVI_TKOH_0033999.9100.0 / 100.0Strict
TkA08G078080LXL04_018693JCVI_TKOH_0033999.8100.0 / 100.0Complex
TkA08G078130LXL04_018695JCVI_TKOH_0033998.799.569 / 26.767Review
TkA08G078280LXL04_018696JCVI_TKOH_0033999.2100.0 / 100.0Strict
TkA08G078290LXL04_018697JCVI_TKOH_00339100.077.297 / 79.444Review
TkA08G078430LXL04_018698JCVI_TKOH_00339100.098.462 / 96.97Complex
TkA08G078600LXL04_018699JCVI_TKOH_0033999.2100.0 / 44.043Review
TkA08G078740LXL04_018700JCVI_TKOH_0033999.697.41 / 48.035Review
TkA08G078750LXL04_018701JCVI_TKOH_00339100.059.74 / 39.485Review
TkA08G078760LXL04_018700JCVI_TKOH_00339100.0100.0 / 27.898Review
TkA08G078810LXL04_018702JCVI_TKOH_0033997.688.788 / 70.406Complex
TkA08G079420LXL04_018706JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G079630LXL04_018708JCVI_TKOH_0033964.7100.0 / 100.0Complex
TkA08G079710LXL04_018711JCVI_TKOH_0033987.8100.0 / 100.0Review
TkA08G079720LXL04_018712JCVI_TKOH_0033995.891.638 / 100.0Complex
TkA08G079770LXL04_018715JCVI_TKOH_0033998.8100.0 / 48.857Review
TkA08G079800LXL04_018717JCVI_TKOH_00339100.099.27 / 58.369Review
TkA08G079820LXL04_018718JCVI_TKOH_0033988.376.238 / 49.355Complex
TkA08G079920LXL04_018720JCVI_TKOH_00339100.097.297 / 44.776Review
TkA08G079950LXL04_018721JCVI_TKOH_0033992.896.961 / 54.714Review
TkA08G079960LXL04_018722JCVI_TKOH_0033999.387.898 / 58.228Review
TkA08G079970LXL04_018722JCVI_TKOH_0033987.572.727 / 33.755Complex
TkA08G080060LXL04_018725JCVI_TKOH_0033999.7100.0 / 98.547Complex
TkA08G080090LXL04_018728JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G080100LXL04_018737JCVI_TKOH_0033994.278.03 / 53.093Complex
TkA08G080110LXL04_018729JCVI_TKOH_0033996.8100.0 / 100.0Strict
TkA08G080160LXL04_018733JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G080170LXL04_018734JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G080180LXL04_018735JCVI_TKOH_00339100.0100.0 / 87.156Complex
TkA08G080190LXL04_018736JCVI_TKOH_00339100.0100.0 / 94.633Complex
TkA08G080200LXL04_018737JCVI_TKOH_0033999.0100.0 / 100.0Complex
TkA08G080230LXL04_018738JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G080280LXL04_018739JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G080400LXL04_018740JCVI_TKOH_00339100.048.325 / 29.882Review
TkA08G080460LXL04_018741JCVI_TKOH_0033998.695.484 / 48.684Review
TkA08G080470LXL04_018742JCVI_TKOH_0033999.3100.0 / 100.0Strict
TkA08G080570LXL04_018743JCVI_TKOH_0033999.4100.0 / 90.932Strict
TkA08G080610LXL04_018744JCVI_TKOH_00339100.0100.0 / 100.0Review
TkA08G080650LXL04_018745JCVI_TKOH_0033999.3100.0 / 100.0Strict
TkA08G080770LXL04_018748JCVI_TKOH_00339100.097.704 / 95.902Review
TkA08G080880LXL04_018750JCVI_TKOH_0033994.3100.0 / 100.0Probable
TkA08G081060LXL04_018751JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G081070LXL04_018754JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G081190LXL04_018755JCVI_TKOH_0033999.6100.0 / 100.0Complex
TkA08G081230LXL04_018756JCVI_TKOH_0033999.3100.0 / 41.176Review
TkA08G081240LXL04_018756JCVI_TKOH_0033997.296.774 / 50.42Review
TkA08G081430LXL04_018758JCVI_TKOH_0033999.5100.0 / 100.0Strict
TkA08G081440LXL04_018759JCVI_TKOH_00339100.0100.0 / 100.0Review
TkA08G081790LXL04_018761JCVI_TKOH_0033999.9100.0 / 100.0Complex
TkA08G081830LXL04_018762JCVI_TKOH_0033999.8100.0 / 100.0Strict
TkA08G081940LXL04_018763JCVI_TKOH_0033994.1100.0 / 100.0Probable
TkA08G081950LXL04_018764JCVI_TKOH_0033999.2100.0 / 89.324Strict
TkA08G082220LXL04_018766JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G082360LXL04_018770JCVI_TKOH_00339100.0100.0 / 99.134Strict
TkA08G082370LXL04_018771JCVI_TKOH_0033999.395.227 / 96.991Strict
TkA08G082460LXL04_018773JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G082470LXL04_018772JCVI_TKOH_00339100.059.829 / 100.0Review
TkA08G082490LXL04_018774JCVI_TKOH_0033999.898.294 / 77.479Probable
TkA08G082650LXL04_018776JCVI_TKOH_0033988.095.078 / 70.339Review
TkA08G082680LXL04_018777JCVI_TKOH_0033995.1100.0 / 100.0Strict
TkA08G082700LXL04_018779JCVI_TKOH_0033998.4100.0 / 100.0Strict
TkA08G082720LXL04_018780JCVI_TKOH_00339100.0100.0 / 90.415Complex
TkA08G082750LXL04_018781JCVI_TKOH_0033996.3100.0 / 100.0Strict
TkA08G082760LXL04_018782JCVI_TKOH_0033999.5100.0 / 100.0Strict
TkA08G082920LXL04_018785JCVI_TKOH_00339100.089.925 / 100.0Strict
TkA08G083040LXL04_018786JCVI_TKOH_0033999.6100.0 / 100.0Complex
TkA08G083050LXL04_018787JCVI_TKOH_00339100.0100.0 / 98.76Complex
TkA08G083130LXL04_018789JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G083150LXL04_018790JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G083260LXL04_018791JCVI_TKOH_0033997.596.346 / 99.612Strict
TkA08G083330LXL04_018792JCVI_TKOH_0033999.696.271 / 100.0Complex
TkA08G083340LXL04_018793JCVI_TKOH_0033988.398.361 / 51.585Complex
TkA08G083350LXL04_018794JCVI_TKOH_00339100.097.97 / 100.0Complex
TkA08G083360LXL04_018795JCVI_TKOH_0033968.199.49 / 99.647Complex
TkA08G083370LXL04_018796JCVI_TKOH_0033973.381.081 / 28.896Review
TkA08G083690LXL04_018798JCVI_TKOH_0033996.599.111 / 96.547Complex
TkA08G083730LXL04_018800JCVI_TKOH_0033999.5100.0 / 100.0Complex
TkA08G083770LXL04_018801JCVI_TKOH_00339100.0100.0 / 90.882Review
TkA08G083780LXL04_018802JCVI_TKOH_00339100.0100.0 / 100.0Complex
TkA08G083820LXL04_018803JCVI_TKOH_0033996.6100.0 / 100.0Review
TkA08G083860LXL04_018805JCVI_TKOH_0033999.9100.0 / 82.521Complex
TkA08G083870LXL04_018805JCVI_TKOH_0033999.391.071 / 11.478Review
TkA08G083920LXL04_018806JCVI_TKOH_0033981.4100.0 / 100.0Complex
TkA08G083940LXL04_018807JCVI_TKOH_00339100.0100.0 / 100.0Complex
TkA08G084070LXL04_018812JCVI_TKOH_00339100.0100.0 / 100.0Complex
TkA08G084080LXL04_018813JCVI_TKOH_0033996.6100.0 / 100.0Complex
TkA08G084120LXL04_018814JCVI_TKOH_0033991.5100.0 / 100.0Complex
TkA08G084130LXL04_018818JCVI_TKOH_0033988.6100.0 / 29.196Complex
TkA08G084420LXL04_018822JCVI_TKOH_0033994.880.0 / 46.964Complex
TkA08G084430LXL04_018823JCVI_TKOH_0033999.898.438 / 68.799Complex
TkA08G084440LXL04_018824JCVI_TKOH_0033992.699.526 / 36.406Complex
TkA08G084600LXL04_018825JCVI_TKOH_00339100.0100.0 / 76.718Complex
TkA08G085010LXL04_018826JCVI_TKOH_0033999.8100.0 / 100.0Complex
TkA08G085150LXL04_018829JCVI_TKOH_0033996.499.05 / 99.761Complex
TkA08G085190LXL04_018830JCVI_TKOH_0033993.689.381 / 48.675Complex
TkA08G085350LXL04_018831JCVI_TKOH_00339100.099.699 / 69.979Review
TkA08G085360LXL04_018832JCVI_TKOH_0033997.4100.0 / 100.0Strict
TkA08G085620LXL04_018834JCVI_TKOH_00339100.0100.0 / 87.576Complex
TkA08G085630LXL04_018835JCVI_TKOH_00339100.0100.0 / 98.324Review
TkA08G085640LXL04_018836JCVI_TKOH_00339100.0100.0 / 60.317Complex
TkA08G085930LXL04_018838JCVI_TKOH_0033999.7100.0 / 49.027Review
TkA08G085940LXL04_018838JCVI_TKOH_00339100.0100.0 / 49.676Review
TkA08G086100LXL04_018842JCVI_TKOH_00339100.088.71 / 30.784Review
TkA08G086110LXL04_018843JCVI_TKOH_0033998.297.27 / 80.737Complex
TkA08G086120LXL04_018844JCVI_TKOH_00339100.099.531 / 8.749Review
TkA08G086220LXL04_018847JCVI_TKOH_0033999.2100.0 / 100.0Complex
TkA08G086250LXL04_018848JCVI_TKOH_00339100.098.452 / 54.828Review
TkA08G086280LXL04_018849JCVI_TKOH_00339100.0100.0 / 100.0Strict
TkA08G086310LXL04_018850JCVI_TKOH_0033998.2100.0 / 100.0Complex
TkA08G086320LXL04_018851JCVI_TKOH_0033943.797.208 / 64.719Review
TkA08G086340LXL04_018852JCVI_TKOH_0033995.9100.0 / 100.0Complex
TkA08G086350LXL04_018853JCVI_TKOH_0033999.5100.0 / 100.0Complex
TkA08G086910LXL04_018856JCVI_TKOH_00339100.097.289 / 73.077Complex
TkA08G086940LXL04_018857JCVI_TKOH_00339100.0100.0 / 100.0Complex
TkA08G087030LXL04_018858JCVI_TKOH_0033996.1100.0 / 63.9Complex
TkA08G087100LXL04_018862JCVI_TKOH_0033986.9100.0 / 100.0Complex
TkA08G087210LXL04_018865JCVI_TKOH_0033999.596.213 / 87.207Complex
TkA08G087220LXL04_018867JCVI_TKOH_00339100.057.988 / 98.99Review
TkA08G087360LXL04_018869JCVI_TKOH_00339100.099.245 / 96.74Complex
TkA08G087380LXL04_018870JCVI_TKOH_0033998.499.083 / 52.126Review
TkA08G087390LXL04_018871JCVI_TKOH_0033999.696.178 / 100.0Complex
TkA08G087430LXL04_018873JCVI_TKOH_0033990.692.547 / 55.597Complex
TkA08G087460LXL04_018874JCVI_TKOH_0033998.392.713 / 86.171Complex
TkA08G087470LXL04_018875JCVI_TKOH_00339100.0100.0 / 25.971Review
TkA08G087560LXL04_018876JCVI_TKOH_00339100.083.051 / 32.45Complex
TkA08G087580LXL04_018877JCVI_TKOH_0033999.290.141 / 55.172Review
TkA08G087590LXL04_018878JCVI_TKOH_0033998.998.361 / 59.468Review
TkA08G087620LXL04_018879JCVI_TKOH_00339100.0100.0 / 100.0Complex