Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00095
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 387
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00095

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00095 Chr02 128804611-139049026 Chr03 18530971-28485416 mixed High 200 anchors
Chr02 128804611-139049026 Chr03 18530971-28485416 JCVI_TKOH_00095 · 387 gene pairs TkA02G502510 | LXL04_013358 | 99.7% | sequence_supported_annotation_or_model_conflict | Review TkA02G503390 | LXL04_013354 | 99.5% | multi_source_to_OH1004 | Complex TkA02G503420 | LXL04_013353 | 99.6% | RBH_high_identity_coverage_synteny | Strict TkA02G503430 | LXL04_013352 | 94.5% | multi_source_to_OH1004 | Complex TkA02G503500 | LXL04_013351 | 99.3% | multi_source_to_OH1004 | Complex TkA02G503570 | LXL04_013348 | 99.7% | non_reciprocal_best_hit | Complex TkA02G503640 | LXL04_013346 | 71.5% | multi_source_to_OH1004 | Complex TkA02G503670 | LXL04_013346 | 98.9% | sequence_supported_annotation_or_model_conflict | Review TkA02G503680 | LXL04_013345 | 99.7% | sequence_supported_annotation_or_model_conflict | Review TkA02G503690 | LXL04_013344 | 98.4% | multi_source_to_OH1004 | Complex TkA02G503710 | LXL04_013343 | 100.0% | multi_source_to_OH1004 | Complex TkA02G503740 | LXL04_013342 | 100.0% | RBH_high_identity_coverage_synteny | Strict
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00095 Chr02:128804611-139049026 Chr03:18530971-28485416 mixed 387 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 387 · Showing 1–200 · Page 1/2

TkA02G502510 → LXL04_013358
99.7%
TkA02G503390 → LXL04_013354
99.5%
TkA02G503420 → LXL04_013353
99.6%
TkA02G503430 → LXL04_013352
94.5%
TkA02G503500 → LXL04_013351
99.3%
TkA02G503570 → LXL04_013348
99.7%
TkA02G503640 → LXL04_013346
71.5%
TkA02G503670 → LXL04_013346
98.9%
TkA02G503680 → LXL04_013345
99.7%
TkA02G503690 → LXL04_013344
98.4%
TkA02G503710 → LXL04_013343
100.0%
TkA02G503740 → LXL04_013342
100.0%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA02G502510LXL04_013358JCVI_TKOH_0009599.795.697 / 51.641Review
TkA02G503390LXL04_013354JCVI_TKOH_0009599.5100.0 / 100.0Complex
TkA02G503420LXL04_013353JCVI_TKOH_0009599.6100.0 / 100.0Strict
TkA02G503430LXL04_013352JCVI_TKOH_0009594.598.355 / 96.774Complex
TkA02G503500LXL04_013351JCVI_TKOH_0009599.399.636 / 98.551Complex
TkA02G503570LXL04_013348JCVI_TKOH_0009599.7100.0 / 100.0Complex
TkA02G503640LXL04_013346JCVI_TKOH_0009571.571.371 / 90.583Complex
TkA02G503670LXL04_013346JCVI_TKOH_0009598.996.679 / 58.744Review
TkA02G503680LXL04_013345JCVI_TKOH_0009599.7100.0 / 100.0Review
TkA02G503690LXL04_013344JCVI_TKOH_0009598.497.686 / 80.687Complex
TkA02G503710LXL04_013343JCVI_TKOH_00095100.0100.0 / 100.0Complex
TkA02G503740LXL04_013342JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G503880LXL04_013341JCVI_TKOH_00095100.0100.0 / 100.0Complex
TkA02G503920LXL04_013340JCVI_TKOH_00095100.093.137 / 17.691Review
TkA02G503970LXL04_013339JCVI_TKOH_0009597.495.939 / 80.085Strict
TkA02G503990LXL04_013338JCVI_TKOH_00095100.018.75 / 9.431Review
TkA02G504000LXL04_013338JCVI_TKOH_0009567.570.339 / 11.527Complex
TkA02G504030LXL04_013336JCVI_TKOH_0009595.5100.0 / 100.0Complex
TkA02G504220LXL04_013333JCVI_TKOH_0009599.5100.0 / 100.0Strict
TkA02G504780LXL04_013326JCVI_TKOH_0009581.699.172 / 34.891Complex
TkA02G504920LXL04_013329JCVI_TKOH_0009598.3100.0 / 100.0Review
TkA02G504970LXL04_013327JCVI_TKOH_0009591.7100.0 / 100.0Probable
TkA02G505010LXL04_013326JCVI_TKOH_00095100.097.071 / 30.426Review
TkA02G505040LXL04_013326JCVI_TKOH_0009597.498.008 / 19.992Review
TkA02G505050LXL04_013326JCVI_TKOH_0009591.299.338 / 22.83Complex
TkA02G505210LXL04_013325JCVI_TKOH_0009574.168.398 / 80.612Review
TkA02G505250LXL04_013324JCVI_TKOH_00095100.090.222 / 52.007Review
TkA02G505280LXL04_013323JCVI_TKOH_00095100.094.57 / 42.653Review
TkA02G505300LXL04_013322JCVI_TKOH_0009599.599.048 / 83.311Strict
TkA02G505770LXL04_013319JCVI_TKOH_00095100.094.041 / 69.54Review
TkA02G505870LXL04_013316JCVI_TKOH_0009564.898.881 / 33.333Complex
TkA02G505880LXL04_013316JCVI_TKOH_0009591.489.81 / 34.602Review
TkA02G505890LXL04_013314JCVI_TKOH_0009586.3100.0 / 74.055Review
TkA02G505920LXL04_013311JCVI_TKOH_0009598.199.171 / 25.615Review
TkA02G505930LXL04_013314JCVI_TKOH_0009582.193.264 / 33.505Complex
TkA02G505940LXL04_013310JCVI_TKOH_0009577.494.795 / 93.478Complex
TkA02G506000LXL04_013310JCVI_TKOH_0009599.099.663 / 91.925Complex
TkA02G506160LXL04_013310JCVI_TKOH_0009578.599.844 / 99.845Complex
TkA02G506520LXL04_013305JCVI_TKOH_0009599.3100.0 / 100.0Complex
TkA02G506630LXL04_013304JCVI_TKOH_0009598.7100.0 / 100.0Review
TkA02G506640LXL04_013303JCVI_TKOH_0009599.487.212 / 88.802Complex
TkA02G506880LXL04_013299JCVI_TKOH_00095100.0100.0 / 94.69Complex
TkA02G506890LXL04_013296JCVI_TKOH_0009593.2100.0 / 95.789Probable
TkA02G507100LXL04_013298JCVI_TKOH_0009599.5100.0 / 100.0Strict
TkA02G507110LXL04_013296JCVI_TKOH_0009590.890.0 / 36.632Complex
TkA02G507120LXL04_013296JCVI_TKOH_00095100.0100.0 / 44.421Review
TkA02G507180LXL04_013293JCVI_TKOH_0009549.891.946 / 99.789Complex
TkA02G507220LXL04_013293JCVI_TKOH_0009594.5100.0 / 100.0Complex
TkA02G507400LXL04_013291JCVI_TKOH_00095100.093.893 / 31.378Review
TkA02G507460LXL04_013289JCVI_TKOH_0009592.2100.0 / 94.855Review
TkA02G507640LXL04_013287JCVI_TKOH_0009588.0100.0 / 100.0Review
TkA02G507910LXL04_013284JCVI_TKOH_0009560.7100.0 / 100.0Review
TkA02G508000LXL04_013281JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G508050LXL04_013280JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G508090LXL04_013279JCVI_TKOH_00095100.0100.0 / 100.0Complex
TkA02G508300LXL04_013278JCVI_TKOH_0009593.1100.0 / 100.0Probable
TkA02G508310LXL04_013277JCVI_TKOH_00095100.0100.0 / 100.0Review
TkA02G508320LXL04_013276JCVI_TKOH_0009599.7100.0 / 100.0Complex
TkA02G508330LXL04_013275JCVI_TKOH_0009599.8100.0 / 100.0Complex
TkA02G508340LXL04_013274JCVI_TKOH_0009598.7100.0 / 92.711Strict
TkA02G508380LXL04_013271JCVI_TKOH_0009597.699.469 / 94.074Strict
TkA02G508610LXL04_013268JCVI_TKOH_0009599.8100.0 / 100.0Strict
TkA02G508620LXL04_013266JCVI_TKOH_0009597.6100.0 / 100.0Strict
TkA02G508710LXL04_013265JCVI_TKOH_0009599.2100.0 / 100.0Complex
TkA02G508730LXL04_013264JCVI_TKOH_0009598.9100.0 / 95.979Complex
TkA02G508740LXL04_013263JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G508750LXL04_013262JCVI_TKOH_0009599.0100.0 / 100.0Complex
TkA02G508980LXL04_013260JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G509010LXL04_013258JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G509020LXL04_013256JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G509030LXL04_013255JCVI_TKOH_00095100.0100.0 / 100.0Complex
TkA02G509470LXL04_013249JCVI_TKOH_0009598.8100.0 / 85.207Complex
TkA02G509590LXL04_013247JCVI_TKOH_0009599.7100.0 / 100.0Strict
TkA02G509600LXL04_013244JCVI_TKOH_0009582.898.077 / 97.409Complex
TkA02G509770LXL04_013242JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G509810LXL04_013241JCVI_TKOH_00095100.0100.0 / 100.0Complex
TkA02G509820LXL04_013240JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G509830LXL04_013239JCVI_TKOH_0009594.8100.0 / 100.0Probable
TkA02G509840LXL04_013238JCVI_TKOH_0009596.7100.0 / 67.413Complex
TkA02G510030LXL04_013236JCVI_TKOH_00095100.0100.0 / 100.0Complex
TkA02G510140LXL04_013235JCVI_TKOH_0009599.7100.0 / 100.0Strict
TkA02G510610LXL04_013232JCVI_TKOH_0009594.8100.0 / 100.0Complex
TkA02G510640LXL04_013231JCVI_TKOH_0009599.8100.0 / 95.484Strict
TkA02G510660LXL04_013229JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G510700LXL04_013226JCVI_TKOH_0009599.563.711 / 100.0Review
TkA02G510750LXL04_013223JCVI_TKOH_0009599.7100.0 / 100.0Complex
TkA02G510880LXL04_013221JCVI_TKOH_0009588.492.41 / 100.0Review
TkA02G511010LXL04_013220JCVI_TKOH_0009598.999.821 / 72.941Probable
TkA02G511070LXL04_013219JCVI_TKOH_0009599.597.143 / 100.0Strict
TkA02G511110LXL04_013218JCVI_TKOH_0009599.5100.0 / 100.0Strict
TkA02G511130LXL04_013217JCVI_TKOH_0009599.496.422 / 94.118Strict
TkA02G511150LXL04_013216JCVI_TKOH_0009599.498.76 / 100.0Strict
TkA02G511160LXL04_013215JCVI_TKOH_0009597.3100.0 / 100.0Strict
TkA02G511260LXL04_013214JCVI_TKOH_0009598.496.985 / 70.111Probable
TkA02G511310LXL04_013213JCVI_TKOH_0009597.0100.0 / 100.0Strict
TkA02G511430LXL04_013212JCVI_TKOH_0009596.171.296 / 56.618Review
TkA02G511440LXL04_013211JCVI_TKOH_0009598.8100.0 / 100.0Strict
TkA02G511450LXL04_013210JCVI_TKOH_0009599.2100.0 / 100.0Review
TkA02G512120LXL04_013204JCVI_TKOH_0009598.198.165 / 80.451Review
TkA02G512510LXL04_013202JCVI_TKOH_0009596.9100.0 / 100.0Strict
TkA02G512850LXL04_013194JCVI_TKOH_0009599.2100.0 / 100.0Complex
TkA02G513130LXL04_013188JCVI_TKOH_0009586.9100.0 / 92.038Review
TkA02G513340LXL04_013187JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G513360LXL04_013186JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G513380LXL04_013185JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G513390LXL04_013184JCVI_TKOH_0009595.9100.0 / 60.166Review
TkA02G513410LXL04_013182JCVI_TKOH_0009593.1100.0 / 100.0Probable
TkA02G513470LXL04_013180JCVI_TKOH_0009597.8100.0 / 100.0Strict
TkA02G513480LXL04_013179JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G513490LXL04_013178JCVI_TKOH_0009596.4100.0 / 95.979Strict
TkA02G513520LXL04_013177JCVI_TKOH_00095100.0100.0 / 100.0Review
TkA02G513550LXL04_013176JCVI_TKOH_0009594.8100.0 / 98.973Probable
TkA02G513560LXL04_013175JCVI_TKOH_0009597.298.93 / 100.0Complex
TkA02G513700LXL04_013171JCVI_TKOH_00095100.0100.0 / 78.814Probable
TkA02G513710LXL04_013170JCVI_TKOH_0009599.8100.0 / 100.0Complex
TkA02G513720LXL04_013168JCVI_TKOH_0009577.495.696 / 92.292Review
TkA02G513750LXL04_013167JCVI_TKOH_0009590.5100.0 / 100.0Complex
TkA02G513820LXL04_013166JCVI_TKOH_00095100.0100.0 / 97.196Strict
TkA02G513830LXL04_013165JCVI_TKOH_0009599.9100.0 / 100.0Strict
TkA02G513840LXL04_013164JCVI_TKOH_0009599.797.508 / 40.492Review
TkA02G513850LXL04_013164JCVI_TKOH_0009596.9100.0 / 57.568Review
TkA02G513860LXL04_013163JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G513870LXL04_013162JCVI_TKOH_0009570.097.917 / 74.908Complex
TkA02G513890LXL04_013160JCVI_TKOH_0009594.972.872 / 17.655Complex
TkA02G514090LXL04_013145JCVI_TKOH_0009589.395.582 / 71.703Complex
TkA02G514110LXL04_013145JCVI_TKOH_0009577.6100.0 / 63.736Complex
TkA02G514120LXL04_013145JCVI_TKOH_0009594.565.468 / 25.0Complex
TkA02G514180LXL04_013143JCVI_TKOH_0009598.8100.0 / 100.0Strict
TkA02G514200LXL04_013142JCVI_TKOH_0009579.6100.0 / 100.0Complex
TkA02G514230LXL04_013141JCVI_TKOH_00095100.0100.0 / 99.673Strict
TkA02G514790LXL04_013140JCVI_TKOH_0009599.6100.0 / 94.406Strict
TkA02G514850LXL04_013138JCVI_TKOH_0009599.7100.0 / 100.0Strict
TkA02G514960LXL04_013134JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G515000LXL04_013133JCVI_TKOH_0009593.3100.0 / 42.443Complex
TkA02G515010LXL04_013133JCVI_TKOH_0009599.1100.0 / 55.901Review
TkA02G515110LXL04_013131JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G516270LXL04_013123JCVI_TKOH_0009599.898.134 / 93.097Complex
TkA02G516390LXL04_013122JCVI_TKOH_0009599.5100.0 / 100.0Strict
TkA02G516400LXL04_013120JCVI_TKOH_00095100.093.229 / 100.0Strict
TkA02G516410LXL04_013085JCVI_TKOH_0009585.897.083 / 45.155Complex
TkA02G516420LXL04_013119JCVI_TKOH_0009582.7100.0 / 31.333Complex
TkA02G516430LXL04_013119JCVI_TKOH_0009599.8100.0 / 100.0Strict
TkA02G516440LXL04_013118JCVI_TKOH_0009598.893.732 / 97.619Strict
TkA02G516820LXL04_013100JCVI_TKOH_0009566.741.333 / 48.76Complex
TkA02G517070LXL04_013100JCVI_TKOH_0009599.2100.0 / 98.347Review
TkA02G517100LXL04_013100JCVI_TKOH_0009599.2100.0 / 98.347Review
TkA02G517290LXL04_013099JCVI_TKOH_0009587.998.551 / 95.498Review
TkA02G517630LXL04_013097JCVI_TKOH_0009595.590.476 / 97.628Strict
TkA02G517990LXL04_013091JCVI_TKOH_0009599.5100.0 / 97.969Strict
TkA02G518000LXL04_013090JCVI_TKOH_0009589.4100.0 / 89.39Review
TkA02G518020LXL04_013089JCVI_TKOH_0009595.4100.0 / 93.127Complex
TkA02G518290LXL04_013088JCVI_TKOH_0009597.885.714 / 39.602Review
TkA02G518380LXL04_013085JCVI_TKOH_00095100.098.807 / 48.159Review
TkA02G518390LXL04_013085JCVI_TKOH_00095100.097.083 / 45.155Review
TkA02G518490LXL04_013083JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G518530LXL04_013082JCVI_TKOH_00095100.0100.0 / 36.709Review
TkA02G518560LXL04_013081JCVI_TKOH_00095100.0100.0 / 92.373Review
TkA02G518600LXL04_013079JCVI_TKOH_00095100.096.806 / 96.806Review
TkA02G518610LXL04_013078JCVI_TKOH_0009578.861.088 / 32.639Review
TkA02G518630LXL04_013077JCVI_TKOH_0009599.499.314 / 94.641Strict
TkA02G518660LXL04_013075JCVI_TKOH_00095100.058.108 / 100.0Review
TkA02G518690LXL04_013072JCVI_TKOH_0009596.1100.0 / 100.0Strict
TkA02G518700LXL04_013071JCVI_TKOH_0009598.6100.0 / 68.889Review
TkA02G518710LXL04_013068JCVI_TKOH_0009599.397.115 / 77.296Probable
TkA02G518760LXL04_013066JCVI_TKOH_0009599.284.354 / 87.943Strict
TkA02G518770LXL04_013065JCVI_TKOH_0009599.8100.0 / 76.007Probable
TkA02G519080LXL04_013064JCVI_TKOH_00095100.0100.0 / 100.0Strict
TkA02G519290LXL04_013063JCVI_TKOH_0009595.792.481 / 69.198Review
TkA02G519400LXL04_013062JCVI_TKOH_0009598.5100.0 / 100.0Strict
TkA02G519410LXL04_013061JCVI_TKOH_0009598.8100.0 / 99.609Complex
TkA02G519480LXL04_013059JCVI_TKOH_0009598.4100.0 / 100.0Strict
TkA02G519600LXL04_013058JCVI_TKOH_0009599.9100.0 / 100.0Strict
TkA02G519610LXL04_013057JCVI_TKOH_00095100.0100.0 / 90.0Complex
TkA02G519620LXL04_013055JCVI_TKOH_0009599.5100.0 / 100.0Strict
TkA02G519680LXL04_013054JCVI_TKOH_0009599.7100.0 / 100.0Strict
TkA02G519880LXL04_013053JCVI_TKOH_0009599.2100.0 / 100.0Strict
TkA02G520000LXL04_013051JCVI_TKOH_0009594.3100.0 / 100.0Complex
TkA02G520020LXL04_013050JCVI_TKOH_0009594.3100.0 / 100.0Probable
TkA02G520070LXL04_013049JCVI_TKOH_00095100.0100.0 / 92.614Complex
TkA02G520080LXL04_013048JCVI_TKOH_0009598.3100.0 / 97.512Strict
TkA02G520460LXL04_013044JCVI_TKOH_0009599.796.54 / 94.364Strict
TkA02G520480LXL04_013042JCVI_TKOH_0009593.698.0 / 100.0Complex
TkA02G520590LXL04_013041JCVI_TKOH_0009575.9100.0 / 100.0Complex
TkA02G520720LXL04_013038JCVI_TKOH_0009599.681.227 / 79.505Complex
TkA02G520890LXL04_013034JCVI_TKOH_0009594.2100.0 / 100.0Probable
TkA02G520900LXL04_013033JCVI_TKOH_00095100.0100.0 / 100.0Review
TkA02G520930LXL04_013032JCVI_TKOH_0009595.578.855 / 34.291Complex
TkA02G520950LXL04_013033JCVI_TKOH_00095100.0100.0 / 100.0Review
TkA02G520990LXL04_013032JCVI_TKOH_0009592.589.965 / 100.0Probable
TkA02G521560LXL04_013026JCVI_TKOH_0009593.9100.0 / 100.0Complex
TkA02G521630LXL04_013025JCVI_TKOH_0009597.5100.0 / 100.0Strict
TkA02G521850LXL04_013023JCVI_TKOH_00095100.0100.0 / 59.857Review
TkA02G522030LXL04_013020JCVI_TKOH_0009578.399.267 / 97.596Complex
TkA02G522110LXL04_013021JCVI_TKOH_0009596.495.833 / 34.848Review
TkA02G522140LXL04_013021JCVI_TKOH_0009580.583.721 / 33.586Complex
TkA02G522160LXL04_013020JCVI_TKOH_0009599.0100.0 / 100.0Complex
TkA02G522180LXL04_013018JCVI_TKOH_0009598.7100.0 / 100.0Strict
TkA02G522330LXL04_013016JCVI_TKOH_0009583.399.206 / 27.84Complex
TkA02G522560LXL04_013015JCVI_TKOH_0009586.3100.0 / 62.442Review
TkA02G522570LXL04_013014JCVI_TKOH_00095100.0100.0 / 100.0Strict