Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00077

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 134

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00077

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00077 Chr02 19811200-25165106 Chr03 135783698-141055173 mixed High 134 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00077`	Chr02:19811200-25165106	Chr03:135783698-141055173	mixed	134	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 134 · Showing 1–134 · Page 1/1

Download All Anchors TSV

TkA02G076650 → LXL04_017073

99.0%

TkA02G076660 → LXL04_017074

94.2%

TkA02G076720 → LXL04_017076

100.0%

TkA02G076730 → LXL04_017077

99.3%

TkA02G076760 → LXL04_017085

60.2%

TkA02G076840 → LXL04_017063

82.4%

TkA02G076860 → LXL04_017077

88.4%

TkA02G077030 → LXL04_017067

89.5%

TkA02G077220 → LXL04_017066

87.9%

TkA02G077290 → LXL04_017062

100.0%

TkA02G077300 → LXL04_017063

89.0%

TkA02G077310 → LXL04_017061

100.0%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA02G076650`	`LXL04_017073`	`JCVI_TKOH_00077`	99.0	100.0 / 100.0	Strict
`TkA02G076660`	`LXL04_017074`	`JCVI_TKOH_00077`	94.2	100.0 / 100.0	Probable
`TkA02G076720`	`LXL04_017076`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Complex
`TkA02G076730`	`LXL04_017077`	`JCVI_TKOH_00077`	99.3	95.434 / 61.471	Review
`TkA02G076760`	`LXL04_017085`	`JCVI_TKOH_00077`	60.2	99.522 / 35.385	Complex
`TkA02G076840`	`LXL04_017063`	`JCVI_TKOH_00077`	82.4	91.948 / 100.0	Complex
`TkA02G076860`	`LXL04_017077`	`JCVI_TKOH_00077`	88.4	97.938 / 29.118	Complex
`TkA02G077030`	`LXL04_017067`	`JCVI_TKOH_00077`	89.5	98.887 / 100.0	Review
`TkA02G077220`	`LXL04_017066`	`JCVI_TKOH_00077`	87.9	100.0 / 100.0	Complex
`TkA02G077290`	`LXL04_017062`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Complex
`TkA02G077300`	`LXL04_017063`	`JCVI_TKOH_00077`	89.0	100.0 / 100.0	Review
`TkA02G077310`	`LXL04_017061`	`JCVI_TKOH_00077`	100.0	99.545 / 92.483	Strict
`TkA02G077750`	`LXL04_017057`	`JCVI_TKOH_00077`	97.5	100.0 / 100.0	Strict
`TkA02G077760`	`LXL04_017056`	`JCVI_TKOH_00077`	99.7	100.0 / 100.0	Strict
`TkA02G077850`	`LXL04_017044`	`JCVI_TKOH_00077`	69.3	100.0 / 100.0	Complex
`TkA02G078010`	`LXL04_017049`	`JCVI_TKOH_00077`	69.1	100.0 / 98.868	Review
`TkA02G078120`	`LXL04_017046`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Strict
`TkA02G078150`	`LXL04_017044`	`JCVI_TKOH_00077`	99.4	100.0 / 100.0	Complex
`TkA02G078210`	`LXL04_017043`	`JCVI_TKOH_00077`	94.4	99.306 / 52.434	Review
`TkA02G079720`	`LXL04_017037`	`JCVI_TKOH_00077`	99.6	100.0 / 100.0	Complex
`TkA02G079730`	`LXL04_017036`	`JCVI_TKOH_00077`	98.9	100.0 / 52.475	Review
`TkA02G079740`	`LXL04_017036`	`JCVI_TKOH_00077`	99.3	87.425 / 20.651	Review
`TkA02G079760`	`LXL04_017035`	`JCVI_TKOH_00077`	80.6	100.0 / 79.601	Complex
`TkA02G079790`	`LXL04_017033`	`JCVI_TKOH_00077`	95.0	100.0 / 18.265	Review
`TkA02G079820`	`LXL04_017033`	`JCVI_TKOH_00077`	95.9	99.539 / 22.245	Review
`TkA02G080190`	`LXL04_017029`	`JCVI_TKOH_00077`	99.7	97.995 / 53.197	Review
`TkA02G080520`	`LXL04_017029`	`JCVI_TKOH_00077`	99.1	84.091 / 45.306	Complex
`TkA02G080680`	`LXL04_017028`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Complex
`TkA02G080980`	`LXL04_017027`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Review
`TkA02G081030`	`LXL04_017026`	`JCVI_TKOH_00077`	99.4	98.236 / 97.697	Complex
`TkA02G081100`	`LXL04_017025`	`JCVI_TKOH_00077`	99.9	100.0 / 100.0	Complex
`TkA02G081560`	`LXL04_017037`	`JCVI_TKOH_00077`	99.6	100.0 / 100.0	Complex
`TkA02G081570`	`LXL04_017036`	`JCVI_TKOH_00077`	99.7	100.0 / 41.301	Review
`TkA02G081580`	`LXL04_017036`	`JCVI_TKOH_00077`	99.3	87.425 / 20.651	Review
`TkA02G081600`	`LXL04_017035`	`JCVI_TKOH_00077`	81.9	100.0 / 79.601	Complex
`TkA02G081630`	`LXL04_017034`	`JCVI_TKOH_00077`	100.0	100.0 / 91.743	Strict
`TkA02G081840`	`LXL04_017033`	`JCVI_TKOH_00077`	94.0	97.794 / 27.143	Review
`TkA02G081850`	`LXL04_017033`	`JCVI_TKOH_00077`	93.8	97.744 / 13.265	Complex
`TkA02G082340`	`LXL04_017030`	`JCVI_TKOH_00077`	100.0	56.863 / 78.378	Complex
`TkA02G082350`	`LXL04_017029`	`JCVI_TKOH_00077`	100.0	97.995 / 53.197	Review
`TkA02G082430`	`LXL04_017029`	`JCVI_TKOH_00077`	99.7	83.668 / 45.306	Complex
`TkA02G082490`	`LXL04_017028`	`JCVI_TKOH_00077`	100.0	100.0 / 56.154	Review
`TkA02G082650`	`LXL04_017027`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Review
`TkA02G082700`	`LXL04_017026`	`JCVI_TKOH_00077`	99.8	98.344 / 97.697	Complex
`TkA02G082730`	`LXL04_017025`	`JCVI_TKOH_00077`	99.9	100.0 / 100.0	Complex
`TkA02G083970`	`LXL04_017019`	`JCVI_TKOH_00077`	96.2	88.667 / 80.606	Complex
`TkA02G084000`	`LXL04_017018`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Strict
`TkA02G084010`	`LXL04_017017`	`JCVI_TKOH_00077`	99.6	100.0 / 99.367	Strict
`TkA02G084190`	`LXL04_017012`	`JCVI_TKOH_00077`	99.4	73.786 / 97.615	Probable
`TkA02G084210`	`LXL04_017011`	`JCVI_TKOH_00077`	92.1	100.0 / 70.521	Complex
`TkA02G084220`	`LXL04_017010`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Complex
`TkA02G084290`	`LXL04_017007`	`JCVI_TKOH_00077`	91.4	100.0 / 100.0	Complex
`TkA02G084370`	`LXL04_017005`	`JCVI_TKOH_00077`	59.8	100.0 / 90.987	Complex
`TkA02G084430`	`LXL04_016999`	`JCVI_TKOH_00077`	98.5	100.0 / 100.0	Strict
`TkA02G084450`	`LXL04_016998`	`JCVI_TKOH_00077`	100.0	96.962 / 87.844	Strict
`TkA02G084500`	`LXL04_016996`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Strict
`TkA02G084510`	`LXL04_016986`	`JCVI_TKOH_00077`	54.3	99.552 / 24.798	Complex
`TkA02G084720`	`LXL04_016993`	`JCVI_TKOH_00077`	100.0	100.0 / 46.36	Review
`TkA02G084730`	`LXL04_016986`	`JCVI_TKOH_00077`	55.1	100.0 / 30.668	Complex
`TkA02G084740`	`LXL04_016992`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Strict
`TkA02G084900`	`LXL04_016991`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Strict
`TkA02G084950`	`LXL04_016990`	`JCVI_TKOH_00077`	100.0	65.741 / 56.349	Review
`TkA02G084960`	`LXL04_016989`	`JCVI_TKOH_00077`	100.0	100.0 / 89.873	Review
`TkA02G085650`	`LXL04_016986`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Strict
`TkA02G085680`	`LXL04_016985`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Strict
`TkA02G085690`	`LXL04_016984`	`JCVI_TKOH_00077`	99.3	100.0 / 100.0	Complex
`TkA02G085700`	`LXL04_016983`	`JCVI_TKOH_00077`	96.7	100.0 / 95.389	Strict
`TkA02G085750`	`LXL04_016982`	`JCVI_TKOH_00077`	100.0	100.0 / 97.436	Strict
`TkA02G086010`	`LXL04_016980`	`JCVI_TKOH_00077`	99.2	100.0 / 100.0	Strict
`TkA02G086050`	`LXL04_016978`	`JCVI_TKOH_00077`	99.5	100.0 / 100.0	Complex
`TkA02G086110`	`LXL04_016977`	`JCVI_TKOH_00077`	49.5	100.0 / 67.138	Review
`TkA02G086140`	`LXL04_016976`	`JCVI_TKOH_00077`	98.1	76.098 / 9.817	Complex
`TkA02G086290`	`LXL04_016975`	`JCVI_TKOH_00077`	98.2	100.0 / 100.0	Strict
`TkA02G086300`	`LXL04_016974`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Strict
`TkA02G086670`	`LXL04_016972`	`JCVI_TKOH_00077`	99.6	100.0 / 100.0	Strict
`TkA02G086750`	`LXL04_016971`	`JCVI_TKOH_00077`	99.6	100.0 / 100.0	Complex
`TkA02G086800`	`LXL04_016970`	`JCVI_TKOH_00077`	98.1	100.0 / 100.0	Strict
`TkA02G086930`	`LXL04_016969`	`JCVI_TKOH_00077`	86.5	100.0 / 82.927	Review
`TkA02G086980`	`LXL04_016966`	`JCVI_TKOH_00077`	91.4	98.957 / 98.787	Review
`TkA02G087010`	`LXL04_016966`	`JCVI_TKOH_00077`	68.3	99.55 / 38.648	Complex
`TkA02G087060`	`LXL04_016966`	`JCVI_TKOH_00077`	78.7	100.0 / 49.567	Complex
`TkA02G087180`	`LXL04_016960`	`JCVI_TKOH_00077`	72.2	84.906 / 19.108	Complex
`TkA02G088340`	`LXL04_016966`	`JCVI_TKOH_00077`	59.8	88.095 / 56.326	Complex
`TkA02G088730`	`LXL04_016960`	`JCVI_TKOH_00077`	98.3	84.369 / 100.0	Strict
`TkA02G089440`	`LXL04_016957`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Strict
`TkA02G089480`	`LXL04_016956`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Review
`TkA02G090020`	`LXL04_016955`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Complex
`TkA02G090130`	`LXL04_016952`	`JCVI_TKOH_00077`	69.9	99.463 / 99.297	Complex
`TkA02G090380`	`LXL04_016952`	`JCVI_TKOH_00077`	81.0	98.188 / 97.891	Complex
`TkA02G090600`	`LXL04_016952`	`JCVI_TKOH_00077`	84.8	99.102 / 59.93	Complex
`TkA02G090630`	`LXL04_016951`	`JCVI_TKOH_00077`	96.7	100.0 / 100.0	Strict
`TkA02G090650`	`LXL04_016950`	`JCVI_TKOH_00077`	94.3	98.779 / 97.713	Probable
`TkA02G090820`	`LXL04_016949`	`JCVI_TKOH_00077`	97.2	100.0 / 64.497	Complex
`TkA02G090960`	`LXL04_016947`	`JCVI_TKOH_00077`	95.9	100.0 / 89.364	Strict
`TkA02G091000`	`LXL04_016946`	`JCVI_TKOH_00077`	97.9	100.0 / 99.739	Strict
`TkA02G091110`	`LXL04_016945`	`JCVI_TKOH_00077`	99.5	100.0 / 97.222	Strict
`TkA02G091190`	`LXL04_016944`	`JCVI_TKOH_00077`	94.1	97.375 / 75.281	Probable
`TkA02G091200`	`LXL04_016944`	`JCVI_TKOH_00077`	96.8	100.0 / 23.408	Review
`TkA02G091220`	`LXL04_016943`	`JCVI_TKOH_00077`	91.6	62.544 / 65.59	Review
`TkA02G091280`	`LXL04_016941`	`JCVI_TKOH_00077`	97.8	95.465 / 79.167	Complex
`TkA02G091290`	`LXL04_016940`	`JCVI_TKOH_00077`	98.8	100.0 / 100.0	Strict
`TkA02G091360`	`LXL04_016938`	`JCVI_TKOH_00077`	99.5	88.511 / 14.566	Review
`TkA02G091450`	`LXL04_016937`	`JCVI_TKOH_00077`	80.6	99.153 / 38.617	Review
`TkA02G091470`	`LXL04_016936`	`JCVI_TKOH_00077`	99.1	100.0 / 81.407	Complex
`TkA02G091480`	`LXL04_016935`	`JCVI_TKOH_00077`	92.0	100.0 / 36.257	Complex
`TkA02G091490`	`LXL04_016934`	`JCVI_TKOH_00077`	64.5	97.5 / 82.825	Review
`TkA02G091500`	`LXL04_016933`	`JCVI_TKOH_00077`	98.5	83.333 / 40.9	Review
`TkA02G091630`	`LXL04_016931`	`JCVI_TKOH_00077`	100.0	100.0 / 63.196	Review
`TkA02G091640`	`LXL04_016930`	`JCVI_TKOH_00077`	90.1	89.823 / 37.627	Complex
`TkA02G091690`	`LXL04_016929`	`JCVI_TKOH_00077`	85.2	93.103 / 18.151	Complex
`TkA02G091940`	`LXL04_016927`	`JCVI_TKOH_00077`	100.0	95.904 / 23.223	Review
`TkA02G091950`	`LXL04_016927`	`JCVI_TKOH_00077`	99.4	88.366 / 26.281	Review
`TkA02G091960`	`LXL04_016927`	`JCVI_TKOH_00077`	100.0	100.0 / 24.711	Review
`TkA02G092120`	`LXL04_016926`	`JCVI_TKOH_00077`	98.4	100.0 / 93.943	Strict
`TkA02G092710`	`LXL04_016923`	`JCVI_TKOH_00077`	98.3	93.548 / 21.284	Review
`TkA02G092810`	`LXL04_016918`	`JCVI_TKOH_00077`	97.1	72.05 / 69.938	Complex
`TkA02G092940`	`LXL04_016916`	`JCVI_TKOH_00077`	100.0	100.0 / 96.524	Strict
`TkA02G092950`	`LXL04_016915`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Complex
`TkA02G092960`	`LXL04_016914`	`JCVI_TKOH_00077`	99.5	100.0 / 100.0	Review
`TkA02G093110`	`LXL04_016913`	`JCVI_TKOH_00077`	99.6	100.0 / 100.0	Complex
`TkA02G093190`	`LXL04_016911`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Strict
`TkA02G094280`	`LXL04_016904`	`JCVI_TKOH_00077`	82.0	100.0 / 100.0	Review
`TkA02G094310`	`LXL04_016903`	`JCVI_TKOH_00077`	98.9	91.327 / 100.0	Complex
`TkA02G094520`	`LXL04_016899`	`JCVI_TKOH_00077`	91.7	100.0 / 100.0	Probable
`TkA02G094540`	`LXL04_016897`	`JCVI_TKOH_00077`	99.4	100.0 / 100.0	Strict
`TkA02G094560`	`LXL04_016896`	`JCVI_TKOH_00077`	95.3	39.489 / 34.943	Review
`TkA02G094580`	`LXL04_016895`	`JCVI_TKOH_00077`	98.2	100.0 / 100.0	Strict
`TkA02G094590`	`LXL04_016894`	`JCVI_TKOH_00077`	97.9	100.0 / 100.0	Strict
`TkA02G094600`	`LXL04_016893`	`JCVI_TKOH_00077`	98.3	100.0 / 82.253	Complex
`TkA02G094610`	`LXL04_016893`	`JCVI_TKOH_00077`	61.9	73.541 / 63.823	Complex
`TkA02G094730`	`LXL04_016889`	`JCVI_TKOH_00077`	61.1	50.943 / 23.902	Complex
`TkA02G094750`	`LXL04_016866`	`JCVI_TKOH_00077`	86.7	37.396 / 73.295	Complex
`TkA02G095350`	`LXL04_016880`	`JCVI_TKOH_00077`	100.0	100.0 / 100.0	Strict
`TkA02G095670`	`LXL04_016877`	`JCVI_TKOH_00077`	96.2	100.0 / 100.0	Strict