Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00304
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 267
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00304

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00304 Chr07 21035079-31930271 Chr06 20642652-31412615 mixed High 200 anchors
Chr07 21035079-31930271 Chr06 20642652-31412615 JCVI_TKOH_00304 · 267 gene pairs TkA07G080470 | LXL04_027626 | 94.7% | multi_source_to_OH1004 | Complex TkA07G080480 | LXL04_027627 | 99.3% | multi_source_to_OH1004 | Complex TkA07G080510 | LXL04_027629 | 96.7% | multi_source_to_OH1004 | Complex TkA07G080750 | LXL04_027630 | 96.9% | multi_source_to_OH1004 | Complex TkA07G080780 | LXL04_027631 | 97.9% | multi_source_to_OH1004 | Complex TkA07G080790 | LXL04_027632 | 97.8% | RBH_high_identity_coverage_synteny | Strict TkA07G081160 | LXL04_027626 | 95.7% | multi_source_to_OH1004 | Complex TkA07G081250 | LXL04_027627 | 99.8% | multi_source_to_OH1004 | Complex TkA07G081500 | LXL04_027629 | 98.3% | multi_source_to_OH1004 | Complex TkA07G081510 | LXL04_027630 | 100.0% | multi_source_to_OH1004 | Complex TkA07G081520 | LXL04_027631 | 99.8% | multi_source_to_OH1004 | Complex TkA07G081530 | LXL04_027631 | 99.2% | sequence_supported_annotation_or_model_conflict | Review
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00304 Chr07:21035079-31930271 Chr06:20642652-31412615 mixed 267 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 267 · Showing 1–200 · Page 1/2

TkA07G080470 → LXL04_027626
94.7%
TkA07G080480 → LXL04_027627
99.3%
TkA07G080510 → LXL04_027629
96.7%
TkA07G080750 → LXL04_027630
96.9%
TkA07G080780 → LXL04_027631
97.9%
TkA07G080790 → LXL04_027632
97.8%
TkA07G081160 → LXL04_027626
95.7%
TkA07G081250 → LXL04_027627
99.8%
TkA07G081500 → LXL04_027629
98.3%
TkA07G081510 → LXL04_027630
100.0%
TkA07G081520 → LXL04_027631
99.8%
TkA07G081530 → LXL04_027631
99.2%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA07G080470LXL04_027626JCVI_TKOH_0030494.7100.0 / 100.0Complex
TkA07G080480LXL04_027627JCVI_TKOH_0030499.3100.0 / 99.757Complex
TkA07G080510LXL04_027629JCVI_TKOH_0030496.7100.0 / 100.0Complex
TkA07G080750LXL04_027630JCVI_TKOH_0030496.961.033 / 94.118Complex
TkA07G080780LXL04_027631JCVI_TKOH_0030497.9100.0 / 100.0Complex
TkA07G080790LXL04_027632JCVI_TKOH_0030497.898.738 / 98.438Strict
TkA07G081160LXL04_027626JCVI_TKOH_0030495.7100.0 / 100.0Complex
TkA07G081250LXL04_027627JCVI_TKOH_0030499.8100.0 / 99.757Complex
TkA07G081500LXL04_027629JCVI_TKOH_0030498.395.676 / 97.753Complex
TkA07G081510LXL04_027630JCVI_TKOH_00304100.097.414 / 83.088Complex
TkA07G081520LXL04_027631JCVI_TKOH_0030499.899.909 / 73.391Complex
TkA07G081530LXL04_027631JCVI_TKOH_0030499.299.487 / 25.938Review
TkA07G081540LXL04_027632JCVI_TKOH_0030496.690.0 / 23.281Review
TkA07G081720LXL04_027633JCVI_TKOH_0030498.698.587 / 65.728Review
TkA07G081730LXL04_027634JCVI_TKOH_0030498.692.81 / 35.859Review
TkA07G081890LXL04_027635JCVI_TKOH_0030499.4100.0 / 100.0Strict
TkA07G082100LXL04_027636JCVI_TKOH_0030497.289.694 / 57.587Review
TkA07G082110LXL04_027637JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G082120LXL04_027638JCVI_TKOH_00304100.064.151 / 55.016Review
TkA07G082390LXL04_027639JCVI_TKOH_0030499.583.122 / 83.83Strict
TkA07G082560LXL04_027642JCVI_TKOH_0030497.8100.0 / 100.0Strict
TkA07G082700LXL04_027644JCVI_TKOH_0030495.777.049 / 4.064Complex
TkA07G082890LXL04_027647JCVI_TKOH_0030482.899.672 / 100.0Complex
TkA07G082980LXL04_027647JCVI_TKOH_0030496.3100.0 / 100.0Complex
TkA07G082990LXL04_027648JCVI_TKOH_0030499.7100.0 / 100.0Complex
TkA07G083100LXL04_027651JCVI_TKOH_0030499.7100.0 / 100.0Strict
TkA07G083110LXL04_027652JCVI_TKOH_0030496.2100.0 / 76.091Probable
TkA07G083480LXL04_027653JCVI_TKOH_0030477.8100.0 / 49.802Review
TkA07G083630LXL04_027656JCVI_TKOH_0030455.698.16 / 99.535Complex
TkA07G083710LXL04_027655JCVI_TKOH_0030499.5100.0 / 100.0Complex
TkA07G083820LXL04_027656JCVI_TKOH_00304100.0100.0 / 100.0Complex
TkA07G083920LXL04_027657JCVI_TKOH_0030499.1100.0 / 77.852Complex
TkA07G084090LXL04_027658JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G084130LXL04_027659JCVI_TKOH_0030499.7100.0 / 100.0Strict
TkA07G084190LXL04_027660JCVI_TKOH_0030498.883.882 / 87.931Complex
TkA07G084790LXL04_027668JCVI_TKOH_0030499.7100.0 / 100.0Complex
TkA07G084800LXL04_027669JCVI_TKOH_00304100.0100.0 / 100.0Complex
TkA07G084840LXL04_027671JCVI_TKOH_0030498.0100.0 / 100.0Strict
TkA07G084920LXL04_027672JCVI_TKOH_0030499.2100.0 / 100.0Strict
TkA07G085080LXL04_027673JCVI_TKOH_0030492.590.728 / 90.741Complex
TkA07G085120LXL04_027674JCVI_TKOH_00304100.0100.0 / 55.285Review
TkA07G085130LXL04_027675JCVI_TKOH_0030499.099.745 / 86.334Strict
TkA07G085290LXL04_027678JCVI_TKOH_00304100.099.296 / 56.74Review
TkA07G085310LXL04_027679JCVI_TKOH_0030497.675.455 / 29.537Complex
TkA07G085430LXL04_027684JCVI_TKOH_0030499.496.024 / 82.99Complex
TkA07G085450LXL04_027685JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G085460LXL04_027686JCVI_TKOH_0030489.077.387 / 77.273Complex
TkA07G085630LXL04_027688JCVI_TKOH_0030495.792.0 / 38.983Review
TkA07G085640LXL04_027688JCVI_TKOH_00304100.0100.0 / 43.22Review
TkA07G086100LXL04_027691JCVI_TKOH_0030499.8100.0 / 100.0Strict
TkA07G086120LXL04_027692JCVI_TKOH_0030499.697.856 / 90.614Strict
TkA07G086130LXL04_027693JCVI_TKOH_0030492.6100.0 / 93.642Probable
TkA07G086590LXL04_027697JCVI_TKOH_0030495.376.23 / 55.912Review
TkA07G086620LXL04_027698JCVI_TKOH_0030497.6100.0 / 100.0Strict
TkA07G086720LXL04_027700JCVI_TKOH_0030499.599.906 / 68.141Complex
TkA07G086910LXL04_027702JCVI_TKOH_0030499.497.493 / 85.784Strict
TkA07G087150LXL04_027705JCVI_TKOH_0030499.6100.0 / 87.159Strict
TkA07G087260LXL04_027706JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G087640LXL04_027714JCVI_TKOH_0030491.789.72 / 21.053Complex
TkA07G087880LXL04_027714JCVI_TKOH_0030499.6100.0 / 100.0Strict
TkA07G087890LXL04_027715JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G087900LXL04_027716JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G088280LXL04_027718JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G088340LXL04_027721JCVI_TKOH_0030482.8100.0 / 100.0Review
TkA07G088870LXL04_027724JCVI_TKOH_0030499.082.051 / 60.377Review
TkA07G088970LXL04_027729JCVI_TKOH_00304100.0100.0 / 100.0Review
TkA07G089110LXL04_027730JCVI_TKOH_0030499.8100.0 / 100.0Review
TkA07G089180LXL04_027731JCVI_TKOH_0030499.195.0 / 63.333Review
TkA07G089420LXL04_027734JCVI_TKOH_0030484.0100.0 / 87.004Review
TkA07G089660LXL04_027737JCVI_TKOH_0030488.998.93 / 41.851Complex
TkA07G089670LXL04_027737JCVI_TKOH_00304100.061.677 / 20.724Complex
TkA07G089790LXL04_027742JCVI_TKOH_0030495.6100.0 / 81.941Complex
TkA07G090030LXL04_027744JCVI_TKOH_0030497.6100.0 / 100.0Strict
TkA07G090040LXL04_027745JCVI_TKOH_0030497.477.483 / 26.773Complex
TkA07G090060LXL04_027745JCVI_TKOH_00304100.093.22 / 50.343Review
TkA07G090680LXL04_027752JCVI_TKOH_0030482.5100.0 / 92.105Complex
TkA07G090740LXL04_027752JCVI_TKOH_0030492.9100.0 / 100.0Complex
TkA07G090760LXL04_027753JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G091040LXL04_027757JCVI_TKOH_0030497.4100.0 / 99.481Complex
TkA07G091240LXL04_027757JCVI_TKOH_0030499.6100.0 / 99.481Complex
TkA07G091620LXL04_027758JCVI_TKOH_0030499.5100.0 / 100.0Strict
TkA07G091710LXL04_027761JCVI_TKOH_0030497.6100.0 / 100.0Strict
TkA07G091720LXL04_027762JCVI_TKOH_00304100.063.78 / 35.065Review
TkA07G092710LXL04_027764JCVI_TKOH_00304100.0100.0 / 53.903Review
TkA07G092920LXL04_027766JCVI_TKOH_0030499.8100.0 / 100.0Strict
TkA07G093070LXL04_027767JCVI_TKOH_0030499.6100.0 / 100.0Strict
TkA07G093260LXL04_027768JCVI_TKOH_0030493.4100.0 / 49.65Complex
TkA07G093280LXL04_027769JCVI_TKOH_0030499.499.2 / 97.83Strict
TkA07G093310LXL04_027771JCVI_TKOH_0030499.7100.0 / 100.0Strict
TkA07G093350LXL04_027772JCVI_TKOH_0030499.5100.0 / 100.0Strict
TkA07G093370LXL04_027773JCVI_TKOH_00304100.0100.0 / 100.0Review
TkA07G093380LXL04_027774JCVI_TKOH_0030499.3100.0 / 100.0Complex
TkA07G093540LXL04_027778JCVI_TKOH_0030494.8100.0 / 100.0Probable
TkA07G093630LXL04_027779JCVI_TKOH_0030492.7100.0 / 100.0Probable
TkA07G093680LXL04_027780JCVI_TKOH_0030498.998.054 / 99.242Review
TkA07G093710LXL04_027781JCVI_TKOH_0030499.8100.0 / 100.0Complex
TkA07G093720LXL04_027782JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G093770LXL04_027783JCVI_TKOH_0030499.4100.0 / 100.0Strict
TkA07G093790LXL04_027784JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G093800LXL04_027785JCVI_TKOH_0030494.3100.0 / 100.0Probable
TkA07G093940LXL04_027786JCVI_TKOH_0030496.1100.0 / 100.0Strict
TkA07G094240LXL04_027788JCVI_TKOH_0030493.5100.0 / 100.0Probable
TkA07G094300LXL04_027791JCVI_TKOH_0030498.381.765 / 58.033Review
TkA07G094450LXL04_027794JCVI_TKOH_00304100.0100.0 / 76.331Probable
TkA07G094460LXL04_027795JCVI_TKOH_00304100.0100.0 / 74.286Probable
TkA07G094540LXL04_027797JCVI_TKOH_0030496.9100.0 / 100.0Strict
TkA07G094560LXL04_027799JCVI_TKOH_0030499.5100.0 / 100.0Strict
TkA07G094610LXL04_027800JCVI_TKOH_0030499.596.804 / 93.805Strict
TkA07G094620LXL04_027801JCVI_TKOH_00304100.089.231 / 45.85Review
TkA07G094860LXL04_027803JCVI_TKOH_0030498.088.496 / 98.039Strict
TkA07G095260LXL04_027805JCVI_TKOH_00304100.0100.0 / 91.525Strict
TkA07G095280LXL04_027806JCVI_TKOH_0030480.391.447 / 18.723Complex
TkA07G095330LXL04_027807JCVI_TKOH_0030497.899.284 / 95.423Complex
TkA07G095510LXL04_027808JCVI_TKOH_0030497.1100.0 / 100.0Strict
TkA07G095660LXL04_027809JCVI_TKOH_0030496.497.909 / 92.131Strict
TkA07G095670LXL04_027810JCVI_TKOH_0030489.583.154 / 98.354Review
TkA07G095980LXL04_027814JCVI_TKOH_00304100.0100.0 / 100.0Review
TkA07G095990LXL04_027814JCVI_TKOH_00304100.096.914 / 66.809Complex
TkA07G096070LXL04_027824JCVI_TKOH_0030483.5100.0 / 100.0Review
TkA07G096250LXL04_027832JCVI_TKOH_0030499.2100.0 / 100.0Strict
TkA07G096270LXL04_027826JCVI_TKOH_0030493.0100.0 / 100.0Complex
TkA07G096460LXL04_027841JCVI_TKOH_0030499.4100.0 / 100.0Complex
TkA07G096470LXL04_027842JCVI_TKOH_0030498.695.652 / 100.0Complex
TkA07G097200LXL04_027852JCVI_TKOH_0030499.898.557 / 90.189Strict
TkA07G097430LXL04_027856JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G097470LXL04_027858JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G097760LXL04_027859JCVI_TKOH_0030499.1100.0 / 100.0Strict
TkA07G097870LXL04_027860JCVI_TKOH_0030499.8100.0 / 100.0Complex
TkA07G097910LXL04_027861JCVI_TKOH_00304100.099.395 / 68.189Review
TkA07G097990LXL04_027864JCVI_TKOH_0030486.3100.0 / 100.0Complex
TkA07G098240LXL04_027868JCVI_TKOH_0030491.499.235 / 79.764Complex
TkA07G098250LXL04_027869JCVI_TKOH_0030499.8100.0 / 88.003Complex
TkA07G099330LXL04_027873JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G099480LXL04_027875JCVI_TKOH_0030499.8100.0 / 100.0Strict
TkA07G099540LXL04_027876JCVI_TKOH_0030489.091.087 / 91.189Review
TkA07G099550LXL04_027877JCVI_TKOH_0030499.376.684 / 59.2Review
TkA07G099600LXL04_027879JCVI_TKOH_0030498.0100.0 / 100.0Strict
TkA07G100310LXL04_027884JCVI_TKOH_0030499.3100.0 / 54.93Review
TkA07G100460LXL04_027885JCVI_TKOH_0030499.7100.0 / 96.552Strict
TkA07G101150LXL04_027886JCVI_TKOH_0030494.1100.0 / 6.953Complex
TkA07G101430LXL04_027889JCVI_TKOH_0030498.792.169 / 37.871Review
TkA07G101490LXL04_027890JCVI_TKOH_0030499.4100.0 / 100.0Strict
TkA07G101630LXL04_027892JCVI_TKOH_0030494.3100.0 / 100.0Probable
TkA07G101770LXL04_027892JCVI_TKOH_0030498.294.958 / 16.992Review
TkA07G101800LXL04_027895JCVI_TKOH_0030491.894.231 / 30.061Complex
TkA07G101810LXL04_027894JCVI_TKOH_00304100.098.837 / 10.918Review
TkA07G101830LXL04_027895JCVI_TKOH_0030482.876.86 / 28.528Complex
TkA07G101870LXL04_027896JCVI_TKOH_0030481.298.636 / 98.831Complex
TkA07G101930LXL04_027894JCVI_TKOH_0030497.098.256 / 10.854Review
TkA07G101950LXL04_027895JCVI_TKOH_0030498.194.595 / 32.209Review
TkA07G101970LXL04_027896JCVI_TKOH_0030499.5100.0 / 100.0Complex
TkA07G102060LXL04_027900JCVI_TKOH_0030499.2100.0 / 85.16Review
TkA07G102070LXL04_027896JCVI_TKOH_0030464.2100.0 / 98.701Complex
TkA07G102080LXL04_027901JCVI_TKOH_0030490.5100.0 / 80.451Probable
TkA07G102270LXL04_027902JCVI_TKOH_0030480.297.721 / 61.969Review
TkA07G103370LXL04_027911JCVI_TKOH_0030453.999.779 / 99.774Complex
TkA07G103490LXL04_027906JCVI_TKOH_0030496.2100.0 / 45.905Review
TkA07G104040LXL04_027907JCVI_TKOH_0030499.5100.0 / 100.0Strict
TkA07G104190LXL04_027911JCVI_TKOH_0030499.3100.0 / 100.0Complex
TkA07G104250LXL04_027912JCVI_TKOH_0030499.3100.0 / 76.836Probable
TkA07G104370LXL04_027914JCVI_TKOH_0030499.199.314 / 93.087Complex
TkA07G104400LXL04_027915JCVI_TKOH_0030458.387.789 / 40.694Complex
TkA07G104900LXL04_027918JCVI_TKOH_0030495.5100.0 / 72.767Probable
TkA07G104910LXL04_027919JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G105040LXL04_027920JCVI_TKOH_00304100.0100.0 / 100.0Complex
TkA07G105090LXL04_027921JCVI_TKOH_0030499.8100.0 / 100.0Complex
TkA07G105120LXL04_027923JCVI_TKOH_0030499.2100.0 / 96.895Complex
TkA07G105130LXL04_027924JCVI_TKOH_0030497.7100.0 / 100.0Complex
TkA07G105310LXL04_027927JCVI_TKOH_0030491.5100.0 / 82.169Complex
TkA07G106350LXL04_027928JCVI_TKOH_00304100.0100.0 / 100.0Review
TkA07G106430LXL04_027929JCVI_TKOH_00304100.0100.0 / 100.0Complex
TkA07G106530LXL04_027930JCVI_TKOH_0030499.4100.0 / 100.0Strict
TkA07G106540LXL04_027931JCVI_TKOH_0030499.0100.0 / 100.0Strict
TkA07G106720LXL04_027932JCVI_TKOH_0030468.094.776 / 38.788Review
TkA07G106960LXL04_027935JCVI_TKOH_0030499.7100.0 / 55.529Review
TkA07G108010LXL04_027942JCVI_TKOH_00304100.0100.0 / 79.891Probable
TkA07G108240LXL04_027945JCVI_TKOH_0030497.6100.0 / 54.485Review
TkA07G108350LXL04_027947JCVI_TKOH_0030499.3100.0 / 100.0Strict
TkA07G108400LXL04_027948JCVI_TKOH_0030499.2100.0 / 100.0Strict
TkA07G108590LXL04_027952JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G108960LXL04_027954JCVI_TKOH_00304100.0100.0 / 66.574Review
TkA07G108970LXL04_027955JCVI_TKOH_0030498.6100.0 / 100.0Strict
TkA07G109500LXL04_027959JCVI_TKOH_0030498.5100.0 / 81.818Strict
TkA07G109520LXL04_027960JCVI_TKOH_00304100.0100.0 / 92.493Review
TkA07G109560LXL04_027959JCVI_TKOH_0030499.497.283 / 30.703Review
TkA07G109830LXL04_027960JCVI_TKOH_0030489.892.289 / 100.0Complex
TkA07G109840LXL04_027963JCVI_TKOH_0030491.1100.0 / 86.028Complex
TkA07G109860LXL04_027964JCVI_TKOH_0030471.5100.0 / 52.564Complex
TkA07G109870LXL04_027964JCVI_TKOH_0030499.6100.0 / 100.0Review
TkA07G109890LXL04_027965JCVI_TKOH_0030499.2100.0 / 50.832Review
TkA07G110020LXL04_027969JCVI_TKOH_0030464.275.879 / 34.16Review
TkA07G110470LXL04_027976JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G110480LXL04_027977JCVI_TKOH_0030495.5100.0 / 96.198Strict
TkA07G110500LXL04_027978JCVI_TKOH_0030499.496.505 / 62.544Complex
TkA07G110570LXL04_027979JCVI_TKOH_0030496.7100.0 / 100.0Strict
TkA07G110690LXL04_027980JCVI_TKOH_00304100.0100.0 / 100.0Strict
TkA07G110850LXL04_027982JCVI_TKOH_0030499.7100.0 / 100.0Strict
TkA07G110860LXL04_027983JCVI_TKOH_0030491.4100.0 / 100.0Complex
TkA07G110870LXL04_027984JCVI_TKOH_0030499.6100.0 / 100.0Strict
TkA07G110910LXL04_027986JCVI_TKOH_0030499.595.692 / 89.809Strict