Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00302
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 552
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00302

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00302 Chr07 20786-16362785 Chr06 1031744-17191746 mixed High 200 anchors
Chr07 20786-16362785 Chr06 1031744-17191746 JCVI_TKOH_00302 · 552 gene pairs TkA07G019630 | LXL04_026946 | 99.6% | sequence_supported_annotation_or_model_conflict | Review TkA07G019640 | LXL04_026947 | 98.1% | multi_source_to_OH1004 | Complex TkA07G019690 | LXL04_026948 | 99.8% | multi_source_to_OH1004 | Complex TkA07G019810 | LXL04_026940 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA07G019870 | LXL04_026941 | 98.9% | multi_source_to_OH1004 | Complex TkA07G019960 | LXL04_026942 | 99.0% | multi_source_to_OH1004 | Complex TkA07G020000 | LXL04_026944 | 98.2% | multi_source_to_OH1004 | Complex TkA07G020010 | LXL04_026945 | 99.6% | multi_source_to_OH1004 | Complex TkA07G020020 | LXL04_026946 | 99.6% | sequence_supported_annotation_or_model_conflict | Review TkA07G020030 | LXL04_026947 | 97.4% | multi_source_to_OH1004 | Complex TkA07G020080 | LXL04_026948 | 99.8% | multi_source_to_OH1004 | Complex TkA07G020480 | LXL04_026956 | 48.6% | multi_source_to_OH1004 | Complex
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00302 Chr07:20786-16362785 Chr06:1031744-17191746 mixed 552 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 552 · Showing 201–400 · Page 2/3

TkA07G019630 → LXL04_026946
99.6%
TkA07G019640 → LXL04_026947
98.1%
TkA07G019690 → LXL04_026948
99.8%
TkA07G019810 → LXL04_026940
100.0%
TkA07G019870 → LXL04_026941
98.9%
TkA07G019960 → LXL04_026942
99.0%
TkA07G020000 → LXL04_026944
98.2%
TkA07G020010 → LXL04_026945
99.6%
TkA07G020020 → LXL04_026946
99.6%
TkA07G020030 → LXL04_026947
97.4%
TkA07G020080 → LXL04_026948
99.8%
TkA07G020480 → LXL04_026956
48.6%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA07G019630LXL04_026946JCVI_TKOH_0030299.6100.0 / 100.0Review
TkA07G019640LXL04_026947JCVI_TKOH_0030298.1100.0 / 100.0Complex
TkA07G019690LXL04_026948JCVI_TKOH_0030299.8100.0 / 100.0Complex
TkA07G019810LXL04_026940JCVI_TKOH_00302100.0100.0 / 100.0Review
TkA07G019870LXL04_026941JCVI_TKOH_0030298.994.898 / 97.128Complex
TkA07G019960LXL04_026942JCVI_TKOH_0030299.0100.0 / 100.0Complex
TkA07G020000LXL04_026944JCVI_TKOH_0030298.2100.0 / 100.0Complex
TkA07G020010LXL04_026945JCVI_TKOH_0030299.6100.0 / 89.354Complex
TkA07G020020LXL04_026946JCVI_TKOH_0030299.6100.0 / 100.0Review
TkA07G020030LXL04_026947JCVI_TKOH_0030297.4100.0 / 100.0Complex
TkA07G020080LXL04_026948JCVI_TKOH_0030299.8100.0 / 100.0Complex
TkA07G020480LXL04_026956JCVI_TKOH_0030248.697.634 / 94.549Complex
TkA07G020510LXL04_026956JCVI_TKOH_0030247.793.682 / 94.34Complex
TkA07G020530LXL04_026954JCVI_TKOH_0030257.498.313 / 94.912Complex
TkA07G020540LXL04_026949JCVI_TKOH_0030299.697.048 / 35.929Review
TkA07G020560LXL04_026949JCVI_TKOH_0030299.6100.0 / 62.568Review
TkA07G020620LXL04_026953JCVI_TKOH_0030293.897.59 / 50.943Complex
TkA07G020660LXL04_026953JCVI_TKOH_0030277.995.238 / 29.14Complex
TkA07G020680LXL04_026954JCVI_TKOH_0030295.4100.0 / 95.796Complex
TkA07G020700LXL04_026955JCVI_TKOH_0030278.8100.0 / 66.933Review
TkA07G020720LXL04_026956JCVI_TKOH_0030263.499.565 / 96.017Complex
TkA07G020730LXL04_026957JCVI_TKOH_0030295.4100.0 / 100.0Complex
TkA07G020750LXL04_026958JCVI_TKOH_0030299.598.646 / 99.829Complex
TkA07G020820LXL04_026960JCVI_TKOH_0030298.691.379 / 91.595Complex
TkA07G020870LXL04_026961JCVI_TKOH_0030299.8100.0 / 100.0Complex
TkA07G021020LXL04_026958JCVI_TKOH_00302100.095.843 / 71.062Complex
TkA07G021040LXL04_026960JCVI_TKOH_0030299.891.398 / 91.595Complex
TkA07G021050LXL04_026961JCVI_TKOH_0030299.6100.0 / 100.0Complex
TkA07G021470LXL04_026964JCVI_TKOH_0030295.8100.0 / 70.872Probable
TkA07G021770LXL04_026965JCVI_TKOH_0030299.8100.0 / 100.0Complex
TkA07G021940LXL04_026966JCVI_TKOH_0030294.0100.0 / 100.0Probable
TkA07G021990LXL04_026967JCVI_TKOH_00302100.099.78 / 70.233Probable
TkA07G022120LXL04_026968JCVI_TKOH_0030298.9100.0 / 100.0Strict
TkA07G022190LXL04_026969JCVI_TKOH_00302100.0100.0 / 87.778Strict
TkA07G022210LXL04_026970JCVI_TKOH_0030297.995.142 / 58.385Review
TkA07G022230LXL04_026971JCVI_TKOH_0030296.7100.0 / 100.0Strict
TkA07G022240LXL04_026972JCVI_TKOH_0030299.7100.0 / 98.883Complex
TkA07G022270LXL04_026975JCVI_TKOH_0030297.399.077 / 51.145Review
TkA07G022290LXL04_026976JCVI_TKOH_0030299.774.505 / 61.179Review
TkA07G022300LXL04_026977JCVI_TKOH_00302100.0100.0 / 100.0Complex
TkA07G022310LXL04_026978JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G022320LXL04_026979JCVI_TKOH_0030298.6100.0 / 100.0Strict
TkA07G022350LXL04_026980JCVI_TKOH_0030299.7100.0 / 100.0Complex
TkA07G022380LXL04_026981JCVI_TKOH_0030297.399.462 / 78.059Probable
TkA07G022450LXL04_026983JCVI_TKOH_0030293.698.936 / 42.727Review
TkA07G022640LXL04_026986JCVI_TKOH_0030242.083.043 / 100.0Complex
TkA07G022980LXL04_026986JCVI_TKOH_00302100.0100.0 / 100.0Review
TkA07G022990LXL04_026987JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G023010LXL04_026988JCVI_TKOH_0030286.7100.0 / 82.587Complex
TkA07G023070LXL04_026988JCVI_TKOH_0030286.7100.0 / 82.587Complex
TkA07G023270LXL04_026990JCVI_TKOH_00302100.0100.0 / 51.289Review
TkA07G023330LXL04_026991JCVI_TKOH_0030299.2100.0 / 100.0Strict
TkA07G023340LXL04_026992JCVI_TKOH_00302100.0100.0 / 100.0Complex
TkA07G023350LXL04_026993JCVI_TKOH_00302100.0100.0 / 100.0Complex
TkA07G023390LXL04_026995JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G023640LXL04_026997JCVI_TKOH_0030289.4100.0 / 100.0Complex
TkA07G023670LXL04_026998JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G023750LXL04_027000JCVI_TKOH_0030294.9100.0 / 100.0Probable
TkA07G024030LXL04_027003JCVI_TKOH_00302100.050.0 / 50.0Complex
TkA07G024060LXL04_027003JCVI_TKOH_00302100.050.0 / 50.0Complex
TkA07G024240LXL04_027004JCVI_TKOH_0030292.5100.0 / 100.0Probable
TkA07G024250LXL04_027005JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G024270LXL04_027006JCVI_TKOH_0030293.7100.0 / 92.42Probable
TkA07G024470LXL04_027007JCVI_TKOH_0030299.5100.0 / 58.575Review
TkA07G024510LXL04_027008JCVI_TKOH_0030299.0100.0 / 100.0Strict
TkA07G024560LXL04_027010JCVI_TKOH_00302100.056.487 / 45.136Review
TkA07G024570LXL04_027011JCVI_TKOH_0030290.4100.0 / 100.0Probable
TkA07G024620LXL04_027012JCVI_TKOH_0030299.1100.0 / 100.0Strict
TkA07G024630LXL04_027013JCVI_TKOH_0030297.886.538 / 49.724Review
TkA07G024960LXL04_027014JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G025300LXL04_027015JCVI_TKOH_00302100.0100.0 / 91.444Complex
TkA07G025640LXL04_027018JCVI_TKOH_0030299.5100.0 / 95.302Complex
TkA07G025650LXL04_027019JCVI_TKOH_0030299.8100.0 / 100.0Complex
TkA07G025660LXL04_027020JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G025810LXL04_027022JCVI_TKOH_0030297.8100.0 / 100.0Strict
TkA07G025820LXL04_027023JCVI_TKOH_0030299.7100.0 / 100.0Strict
TkA07G025830LXL04_027024JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G026030LXL04_027025JCVI_TKOH_00302100.0100.0 / 100.0Complex
TkA07G026040LXL04_027026JCVI_TKOH_00302100.099.16 / 64.835Review
TkA07G026390LXL04_027028JCVI_TKOH_0030299.6100.0 / 100.0Strict
TkA07G026520LXL04_027029JCVI_TKOH_0030285.7100.0 / 65.882Complex
TkA07G026700LXL04_027030JCVI_TKOH_0030296.1100.0 / 100.0Strict
TkA07G026710LXL04_027031JCVI_TKOH_0030299.3100.0 / 100.0Strict
TkA07G026720LXL04_027032JCVI_TKOH_00302100.081.595 / 99.254Strict
TkA07G026930LXL04_027033JCVI_TKOH_0030298.676.613 / 76.862Probable
TkA07G026940LXL04_027035JCVI_TKOH_0030298.8100.0 / 98.901Strict
TkA07G026960LXL04_027036JCVI_TKOH_0030299.9100.0 / 100.0Strict
TkA07G027280LXL04_027038JCVI_TKOH_0030299.5100.0 / 100.0Strict
TkA07G027300LXL04_027039JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G027330LXL04_027040JCVI_TKOH_0030299.2100.0 / 100.0Strict
TkA07G027560LXL04_027042JCVI_TKOH_0030287.688.976 / 62.778Complex
TkA07G027610LXL04_027044JCVI_TKOH_0030297.4100.0 / 100.0Strict
TkA07G027910LXL04_027047JCVI_TKOH_00302100.048.795 / 58.273Review
TkA07G028220LXL04_027049JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G028520LXL04_027053JCVI_TKOH_0030252.995.161 / 90.0Complex
TkA07G028890LXL04_027053JCVI_TKOH_00302100.097.878 / 90.0Complex
TkA07G028910LXL04_027054JCVI_TKOH_0030297.873.984 / 94.792Complex
TkA07G028980LXL04_027055JCVI_TKOH_00302100.0100.0 / 97.378Strict
TkA07G029170LXL04_027056JCVI_TKOH_0030296.494.382 / 60.844Review
TkA07G029180LXL04_027057JCVI_TKOH_0030295.0100.0 / 100.0Strict
TkA07G029200LXL04_027059JCVI_TKOH_0030292.9100.0 / 18.598Complex
TkA07G029260LXL04_027061JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G029270LXL04_027062JCVI_TKOH_0030299.499.076 / 43.241Review
TkA07G029420LXL04_027063JCVI_TKOH_0030287.396.787 / 95.926Review
TkA07G029610LXL04_027065JCVI_TKOH_0030299.8100.0 / 100.0Strict
TkA07G029620LXL04_027066JCVI_TKOH_0030299.8100.0 / 100.0Strict
TkA07G029640LXL04_027067JCVI_TKOH_0030299.0100.0 / 100.0Strict
TkA07G029650LXL04_027068JCVI_TKOH_0030299.8100.0 / 100.0Strict
TkA07G029680LXL04_027069JCVI_TKOH_0030299.691.864 / 53.137Review
TkA07G029740LXL04_027070JCVI_TKOH_0030291.0100.0 / 100.0Probable
TkA07G029750LXL04_027071JCVI_TKOH_00302100.0100.0 / 88.406Complex
TkA07G029790LXL04_027072JCVI_TKOH_0030296.6100.0 / 89.055Strict
TkA07G029900LXL04_027074JCVI_TKOH_0030292.5100.0 / 100.0Probable
TkA07G029910LXL04_027075JCVI_TKOH_0030299.2100.0 / 100.0Strict
TkA07G030530LXL04_027078JCVI_TKOH_0030299.7100.0 / 96.442Strict
TkA07G030800LXL04_027079JCVI_TKOH_0030299.8100.0 / 100.0Strict
TkA07G030820LXL04_027081JCVI_TKOH_0030299.1100.0 / 90.834Strict
TkA07G030890LXL04_027083JCVI_TKOH_00302100.0100.0 / 91.05Strict
TkA07G031030LXL04_027084JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G031050LXL04_027086JCVI_TKOH_00302100.0100.0 / 100.0Complex
TkA07G031070LXL04_027087JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G031110LXL04_027088JCVI_TKOH_00302100.092.812 / 59.281Review
TkA07G031160LXL04_027088JCVI_TKOH_0030285.4100.0 / 31.337Complex
TkA07G031170LXL04_027090JCVI_TKOH_0030299.594.527 / 100.0Complex
TkA07G031200LXL04_027091JCVI_TKOH_00302100.0100.0 / 100.0Review
TkA07G031540LXL04_027088JCVI_TKOH_0030270.584.0 / 20.559Complex
TkA07G031680LXL04_027089JCVI_TKOH_0030295.769.697 / 34.717Complex
TkA07G031700LXL04_027090JCVI_TKOH_0030297.5100.0 / 83.158Complex
TkA07G031770LXL04_027093JCVI_TKOH_00302100.0100.0 / 100.0Review
TkA07G031880LXL04_027094JCVI_TKOH_0030296.094.309 / 64.325Review
TkA07G031900LXL04_027095JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G032050LXL04_027096JCVI_TKOH_0030299.4100.0 / 100.0Complex
TkA07G032130LXL04_027096JCVI_TKOH_0030295.8100.0 / 79.444Complex
TkA07G032310LXL04_027096JCVI_TKOH_0030271.796.859 / 61.944Complex
TkA07G032480LXL04_027100JCVI_TKOH_0030245.9100.0 / 100.0Complex
TkA07G032770LXL04_027097JCVI_TKOH_0030296.7100.0 / 58.402Review
TkA07G033030LXL04_027098JCVI_TKOH_0030298.635.749 / 18.005Complex
TkA07G033050LXL04_027100JCVI_TKOH_0030298.6100.0 / 62.393Complex
TkA07G033090LXL04_027101JCVI_TKOH_0030298.1100.0 / 94.048Strict
TkA07G033500LXL04_027106JCVI_TKOH_0030299.283.706 / 70.43Complex
TkA07G033510LXL04_027103JCVI_TKOH_0030285.541.758 / 29.457Review
TkA07G033550LXL04_027107JCVI_TKOH_00302100.0100.0 / 100.0Review
TkA07G033560LXL04_027098JCVI_TKOH_0030298.192.529 / 39.173Review
TkA07G033570LXL04_027111JCVI_TKOH_0030299.7100.0 / 96.543Complex
TkA07G033600LXL04_027098JCVI_TKOH_0030298.192.529 / 39.173Review
TkA07G033610LXL04_027111JCVI_TKOH_0030299.7100.0 / 100.0Review
TkA07G033660LXL04_027114JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G033670LXL04_027116JCVI_TKOH_00302100.097.938 / 49.186Review
TkA07G033690LXL04_027117JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G034000LXL04_027121JCVI_TKOH_0030296.791.304 / 90.205Complex
TkA07G034090LXL04_027121JCVI_TKOH_0030286.995.913 / 80.182Complex
TkA07G034100LXL04_027123JCVI_TKOH_00302100.0100.0 / 95.958Complex
TkA07G034200LXL04_027124JCVI_TKOH_0030290.294.964 / 14.898Complex
TkA07G034220LXL04_027126JCVI_TKOH_0030295.681.928 / 80.952Strict
TkA07G034450LXL04_027132JCVI_TKOH_0030295.686.928 / 51.331Review
TkA07G034900LXL04_027138JCVI_TKOH_0030254.885.144 / 98.836Complex
TkA07G034930LXL04_027138JCVI_TKOH_0030266.293.353 / 89.374Complex
TkA07G034940LXL04_027139JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G035110LXL04_027139JCVI_TKOH_0030241.299.16 / 35.373Complex
TkA07G035300LXL04_027144JCVI_TKOH_0030299.3100.0 / 93.706Strict
TkA07G035310LXL04_027145JCVI_TKOH_0030296.997.5 / 70.652Probable
TkA07G035370LXL04_027147JCVI_TKOH_00302100.0100.0 / 90.964Strict
TkA07G035470LXL04_027148JCVI_TKOH_0030298.587.665 / 83.613Strict
TkA07G035530LXL04_027149JCVI_TKOH_00302100.084.973 / 51.856Review
TkA07G035540LXL04_027150JCVI_TKOH_0030291.671.552 / 79.808Probable
TkA07G035590LXL04_027151JCVI_TKOH_0030238.692.43 / 41.956Complex
TkA07G035600LXL04_027152JCVI_TKOH_0030260.199.582 / 78.235Complex
TkA07G035730LXL04_027153JCVI_TKOH_00302100.099.522 / 96.744Review
TkA07G035740LXL04_027152JCVI_TKOH_00302100.0100.0 / 100.0Complex
TkA07G035750LXL04_027154JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G035780LXL04_027155JCVI_TKOH_0030299.2100.0 / 100.0Review
TkA07G035790LXL04_027156JCVI_TKOH_00302100.050.0 / 50.893Review
TkA07G035800LXL04_027157JCVI_TKOH_0030297.9100.0 / 100.0Complex
TkA07G035810LXL04_027158JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G035820LXL04_027159JCVI_TKOH_0030299.0100.0 / 92.344Strict
TkA07G036140LXL04_027162JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G036270LXL04_027164JCVI_TKOH_00302100.093.067 / 98.31Strict
TkA07G036310LXL04_027165JCVI_TKOH_0030298.8100.0 / 95.501Complex
TkA07G036390LXL04_027168JCVI_TKOH_0030275.0100.0 / 100.0Complex
TkA07G036470LXL04_027168JCVI_TKOH_0030297.7100.0 / 100.0Complex
TkA07G036650LXL04_027165JCVI_TKOH_0030273.1100.0 / 20.472Complex
TkA07G036750LXL04_027168JCVI_TKOH_0030277.060.106 / 13.201Complex
TkA07G036900LXL04_027170JCVI_TKOH_0030268.553.358 / 24.315Complex
TkA07G036990LXL04_027170JCVI_TKOH_0030268.597.436 / 68.151Complex
TkA07G037000LXL04_027170JCVI_TKOH_0030292.2100.0 / 100.0Complex
TkA07G037020LXL04_027171JCVI_TKOH_00302100.0100.0 / 100.0Complex
TkA07G037030LXL04_027172JCVI_TKOH_0030297.2100.0 / 100.0Review
TkA07G037120LXL04_027173JCVI_TKOH_0030297.6100.0 / 100.0Strict
TkA07G037130LXL04_027174JCVI_TKOH_0030295.4100.0 / 100.0Strict
TkA07G037150LXL04_027175JCVI_TKOH_0030299.8100.0 / 100.0Strict
TkA07G038050LXL04_027178JCVI_TKOH_0030299.4100.0 / 100.0Strict
TkA07G038070LXL04_027179JCVI_TKOH_0030299.5100.0 / 100.0Strict
TkA07G038400LXL04_027181JCVI_TKOH_0030299.4100.0 / 100.0Strict
TkA07G039060LXL04_027185JCVI_TKOH_0030299.8100.0 / 100.0Complex
TkA07G039410LXL04_027188JCVI_TKOH_0030286.278.235 / 61.062Review
TkA07G039510LXL04_027190JCVI_TKOH_0030299.8100.0 / 100.0Strict
TkA07G039520LXL04_027191JCVI_TKOH_0030299.5100.0 / 100.0Complex
TkA07G039660LXL04_027192JCVI_TKOH_0030299.494.706 / 54.3Review
TkA07G039810LXL04_027195JCVI_TKOH_00302100.0100.0 / 100.0Strict
TkA07G039830LXL04_027196JCVI_TKOH_0030299.799.346 / 53.805Review