Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00146

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 168

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00146

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00146 Chr03 105583640-112849959 Chr02 122826211-129991239 mixed High 168 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00146`	Chr03:105583640-112849959	Chr02:122826211-129991239	mixed	168	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 168 · Showing 1–168 · Page 1/1

Download All Anchors TSV

TkA03G424240 → LXL04_009322

89.5%

TkA03G424320 → LXL04_009322

95.8%

TkA03G424810 → LXL04_009322

98.6%

TkA03G425630 → LXL04_009322

85.8%

TkA03G426970 → LXL04_009322

75.9%

TkA03G427390 → LXL04_009338

100.0%

TkA03G427740 → LXL04_009342

98.0%

TkA03G428010 → LXL04_009344

100.0%

TkA03G428080 → LXL04_009344

67.9%

TkA03G428130 → LXL04_009349

82.0%

TkA03G428180 → LXL04_009350

74.8%

TkA03G428310 → LXL04_009351

99.5%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA03G424240`	`LXL04_009322`	`JCVI_TKOH_00146`	89.5	100.0 / 100.0	Complex
`TkA03G424320`	`LXL04_009322`	`JCVI_TKOH_00146`	95.8	99.653 / 99.653	Complex
`TkA03G424810`	`LXL04_009322`	`JCVI_TKOH_00146`	98.6	100.0 / 100.0	Complex
`TkA03G425630`	`LXL04_009322`	`JCVI_TKOH_00146`	85.8	88.435 / 90.278	Complex
`TkA03G426970`	`LXL04_009322`	`JCVI_TKOH_00146`	75.9	99.327 / 99.306	Complex
`TkA03G427390`	`LXL04_009338`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Complex
`TkA03G427740`	`LXL04_009342`	`JCVI_TKOH_00146`	98.0	84.659 / 42.816	Review
`TkA03G428010`	`LXL04_009344`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Complex
`TkA03G428080`	`LXL04_009344`	`JCVI_TKOH_00146`	67.9	98.639 / 98.214	Complex
`TkA03G428130`	`LXL04_009349`	`JCVI_TKOH_00146`	82.0	96.875 / 100.0	Complex
`TkA03G428180`	`LXL04_009350`	`JCVI_TKOH_00146`	74.8	97.656 / 26.293	Complex
`TkA03G428310`	`LXL04_009351`	`JCVI_TKOH_00146`	99.5	100.0 / 97.118	Strict
`TkA03G428340`	`LXL04_009352`	`JCVI_TKOH_00146`	98.6	89.391 / 90.669	Strict
`TkA03G428500`	`LXL04_009353`	`JCVI_TKOH_00146`	95.4	100.0 / 100.0	Strict
`TkA03G428510`	`LXL04_009354`	`JCVI_TKOH_00146`	83.2	100.0 / 100.0	Review
`TkA03G428520`	`LXL04_009355`	`JCVI_TKOH_00146`	99.3	100.0 / 90.476	Complex
`TkA03G428720`	`LXL04_009356`	`JCVI_TKOH_00146`	99.3	96.203 / 66.376	Review
`TkA03G428820`	`LXL04_009359`	`JCVI_TKOH_00146`	98.6	100.0 / 100.0	Strict
`TkA03G428890`	`LXL04_009360`	`JCVI_TKOH_00146`	98.5	33.673 / 91.667	Review
`TkA03G429890`	`LXL04_009368`	`JCVI_TKOH_00146`	100.0	68.448 / 61.982	Complex
`TkA03G430130`	`LXL04_009369`	`JCVI_TKOH_00146`	99.7	100.0 / 100.0	Strict
`TkA03G430260`	`LXL04_009370`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Strict
`TkA03G430280`	`LXL04_009372`	`JCVI_TKOH_00146`	92.3	100.0 / 91.228	Probable
`TkA03G430430`	`LXL04_009374`	`JCVI_TKOH_00146`	98.3	100.0 / 100.0	Strict
`TkA03G430440`	`LXL04_009373`	`JCVI_TKOH_00146`	98.9	99.825 / 99.825	Strict
`TkA03G430470`	`LXL04_009375`	`JCVI_TKOH_00146`	97.8	100.0 / 97.788	Strict
`TkA03G430540`	`LXL04_009376`	`JCVI_TKOH_00146`	98.5	55.372 / 79.762	Review
`TkA03G431300`	`LXL04_009383`	`JCVI_TKOH_00146`	92.0	100.0 / 100.0	Probable
`TkA03G432320`	`LXL04_009385`	`JCVI_TKOH_00146`	98.6	99.727 / 94.56	Strict
`TkA03G432840`	`LXL04_009391`	`JCVI_TKOH_00146`	99.5	100.0 / 100.0	Strict
`TkA03G433040`	`LXL04_009395`	`JCVI_TKOH_00146`	68.1	94.377 / 28.699	Complex
`TkA03G433700`	`LXL04_009394`	`JCVI_TKOH_00146`	99.2	100.0 / 100.0	Strict
`TkA03G433730`	`LXL04_009395`	`JCVI_TKOH_00146`	99.8	100.0 / 44.684	Review
`TkA03G434050`	`LXL04_009398`	`JCVI_TKOH_00146`	94.8	100.0 / 100.0	Probable
`TkA03G434110`	`LXL04_009401`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Strict
`TkA03G434120`	`LXL04_009402`	`JCVI_TKOH_00146`	90.8	100.0 / 42.308	Complex
`TkA03G434130`	`LXL04_009402`	`JCVI_TKOH_00146`	100.0	100.0 / 48.077	Review
`TkA03G434140`	`LXL04_009403`	`JCVI_TKOH_00146`	91.6	95.349 / 93.989	Complex
`TkA03G434320`	`LXL04_009404`	`JCVI_TKOH_00146`	100.0	95.098 / 98.98	Review
`TkA03G434400`	`LXL04_009405`	`JCVI_TKOH_00146`	99.8	100.0 / 68.676	Review
`TkA03G434410`	`LXL04_009406`	`JCVI_TKOH_00146`	100.0	95.098 / 88.45	Strict
`TkA03G434460`	`LXL04_009407`	`JCVI_TKOH_00146`	99.8	100.0 / 100.0	Strict
`TkA03G434610`	`LXL04_009411`	`JCVI_TKOH_00146`	98.7	86.68 / 86.015	Complex
`TkA03G434780`	`LXL04_009410`	`JCVI_TKOH_00146`	95.9	68.362 / 96.8	Review
`TkA03G434830`	`LXL04_009411`	`JCVI_TKOH_00146`	99.8	100.0 / 100.0	Complex
`TkA03G434840`	`LXL04_009412`	`JCVI_TKOH_00146`	96.3	100.0 / 100.0	Complex
`TkA03G435160`	`LXL04_009412`	`JCVI_TKOH_00146`	71.2	77.947 / 97.674	Complex
`TkA03G435180`	`LXL04_009413`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Complex
`TkA03G435200`	`LXL04_009415`	`JCVI_TKOH_00146`	99.8	100.0 / 100.0	Strict
`TkA03G435440`	`LXL04_009416`	`JCVI_TKOH_00146`	73.7	100.0 / 100.0	Review
`TkA03G435690`	`LXL04_009417`	`JCVI_TKOH_00146`	100.0	97.904 / 92.113	Complex
`TkA03G435780`	`LXL04_009419`	`JCVI_TKOH_00146`	85.3	52.448 / 88.235	Review
`TkA03G435870`	`LXL04_009418`	`JCVI_TKOH_00146`	99.3	100.0 / 100.0	Strict
`TkA03G436010`	`LXL04_009419`	`JCVI_TKOH_00146`	95.3	42.953 / 75.294	Complex
`TkA03G439040`	`LXL04_009423`	`JCVI_TKOH_00146`	100.0	98.387 / 100.0	Review
`TkA03G439080`	`LXL04_009426`	`JCVI_TKOH_00146`	100.0	91.27 / 28.256	Review
`TkA03G439270`	`LXL04_009428`	`JCVI_TKOH_00146`	100.0	100.0 / 57.703	Review
`TkA03G439770`	`LXL04_009430`	`JCVI_TKOH_00146`	99.3	100.0 / 99.814	Strict
`TkA03G439780`	`LXL04_009431`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Strict
`TkA03G439800`	`LXL04_009432`	`JCVI_TKOH_00146`	97.5	92.324 / 89.178	Strict
`TkA03G439840`	`LXL04_009433`	`JCVI_TKOH_00146`	100.0	93.857 / 58.017	Review
`TkA03G439850`	`LXL04_009434`	`JCVI_TKOH_00146`	98.9	100.0 / 100.0	Strict
`TkA03G440030`	`LXL04_009444`	`JCVI_TKOH_00146`	98.8	100.0 / 100.0	Strict
`TkA03G440070`	`LXL04_009446`	`JCVI_TKOH_00146`	88.9	100.0 / 100.0	Review
`TkA03G440350`	`LXL04_009461`	`JCVI_TKOH_00146`	72.7	99.784 / 86.424	Complex
`TkA03G440380`	`LXL04_009458`	`JCVI_TKOH_00146`	99.7	100.0 / 98.011	Strict
`TkA03G440410`	`LXL04_009464`	`JCVI_TKOH_00146`	98.6	100.0 / 100.0	Review
`TkA03G440460`	`LXL04_009465`	`JCVI_TKOH_00146`	88.9	100.0 / 79.396	Complex
`TkA03G440630`	`LXL04_009468`	`JCVI_TKOH_00146`	83.2	98.0 / 15.764	Complex
`TkA03G440810`	`LXL04_009468`	`JCVI_TKOH_00146`	87.1	94.51 / 19.376	Complex
`TkA03G440820`	`LXL04_009466`	`JCVI_TKOH_00146`	82.9	14.902 / 76.768	Review
`TkA03G440960`	`LXL04_009471`	`JCVI_TKOH_00146`	99.5	100.0 / 100.0	Strict
`TkA03G441230`	`LXL04_009476`	`JCVI_TKOH_00146`	99.7	100.0 / 93.093	Strict
`TkA03G441370`	`LXL04_009478`	`JCVI_TKOH_00146`	99.2	100.0 / 100.0	Strict
`TkA03G441420`	`LXL04_009481`	`JCVI_TKOH_00146`	97.2	88.945 / 16.004	Review
`TkA03G441430`	`LXL04_009481`	`JCVI_TKOH_00146`	100.0	96.814 / 49.458	Review
`TkA03G441580`	`LXL04_009482`	`JCVI_TKOH_00146`	98.3	100.0 / 54.167	Review
`TkA03G441680`	`LXL04_009484`	`JCVI_TKOH_00146`	99.0	100.0 / 100.0	Review
`TkA03G441700`	`LXL04_009485`	`JCVI_TKOH_00146`	94.2	99.0 / 98.113	Probable
`TkA03G441750`	`LXL04_009486`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Review
`TkA03G441790`	`LXL04_009487`	`JCVI_TKOH_00146`	86.5	100.0 / 100.0	Review
`TkA03G441850`	`LXL04_009488`	`JCVI_TKOH_00146`	99.5	100.0 / 100.0	Strict
`TkA03G441920`	`LXL04_009491`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Review
`TkA03G441980`	`LXL04_009492`	`JCVI_TKOH_00146`	99.1	100.0 / 100.0	Complex
`TkA03G441990`	`LXL04_009493`	`JCVI_TKOH_00146`	97.4	100.0 / 100.0	Strict
`TkA03G442020`	`LXL04_009494`	`JCVI_TKOH_00146`	94.8	100.0 / 100.0	Probable
`TkA03G442050`	`LXL04_009495`	`JCVI_TKOH_00146`	97.8	100.0 / 100.0	Strict
`TkA03G442180`	`LXL04_009496`	`JCVI_TKOH_00146`	95.1	98.324 / 57.009	Review
`TkA03G442580`	`LXL04_009497`	`JCVI_TKOH_00146`	91.8	100.0 / 100.0	Complex
`TkA03G442660`	`LXL04_009497`	`JCVI_TKOH_00146`	62.9	88.911 / 93.168	Complex
`TkA03G442960`	`LXL04_009501`	`JCVI_TKOH_00146`	99.8	93.359 / 74.804	Complex
`TkA03G442970`	`LXL04_009502`	`JCVI_TKOH_00146`	81.1	61.157 / 67.89	Complex
`TkA03G443030`	`LXL04_009503`	`JCVI_TKOH_00146`	99.7	100.0 / 100.0	Review
`TkA03G443060`	`LXL04_009505`	`JCVI_TKOH_00146`	94.1	100.0 / 100.0	Probable
`TkA03G443110`	`LXL04_009506`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Complex
`TkA03G443230`	`LXL04_009509`	`JCVI_TKOH_00146`	96.4	100.0 / 100.0	Review
`TkA03G443240`	`LXL04_009510`	`JCVI_TKOH_00146`	99.7	100.0 / 100.0	Strict
`TkA03G443530`	`LXL04_009511`	`JCVI_TKOH_00146`	96.0	99.477 / 56.967	Review
`TkA03G443550`	`LXL04_009511`	`JCVI_TKOH_00146`	99.1	94.34 / 35.861	Review
`TkA03G443610`	`LXL04_009512`	`JCVI_TKOH_00146`	99.7	100.0 / 100.0	Complex
`TkA03G443920`	`LXL04_009515`	`JCVI_TKOH_00146`	99.6	100.0 / 100.0	Strict
`TkA03G444990`	`LXL04_009519`	`JCVI_TKOH_00146`	98.8	100.0 / 100.0	Strict
`TkA03G445030`	`LXL04_009521`	`JCVI_TKOH_00146`	99.2	100.0 / 100.0	Strict
`TkA03G445060`	`LXL04_009522`	`JCVI_TKOH_00146`	99.0	100.0 / 100.0	Strict
`TkA03G445090`	`LXL04_009525`	`JCVI_TKOH_00146`	95.8	100.0 / 100.0	Strict
`TkA03G445200`	`LXL04_009528`	`JCVI_TKOH_00146`	96.1	100.0 / 100.0	Complex
`TkA03G445260`	`LXL04_009530`	`JCVI_TKOH_00146`	73.3	100.0 / 100.0	Review
`TkA03G445400`	`LXL04_009532`	`JCVI_TKOH_00146`	100.0	100.0 / 68.429	Review
`TkA03G445490`	`LXL04_009533`	`JCVI_TKOH_00146`	99.7	100.0 / 98.844	Strict
`TkA03G445500`	`LXL04_009534`	`JCVI_TKOH_00146`	98.5	100.0 / 100.0	Strict
`TkA03G445510`	`LXL04_009535`	`JCVI_TKOH_00146`	97.7	100.0 / 100.0	Strict
`TkA03G445870`	`LXL04_009537`	`JCVI_TKOH_00146`	99.4	95.702 / 95.429	Review
`TkA03G446170`	`LXL04_009538`	`JCVI_TKOH_00146`	100.0	96.703 / 52.853	Review
`TkA03G446410`	`LXL04_009539`	`JCVI_TKOH_00146`	99.9	100.0 / 100.0	Complex
`TkA03G447020`	`LXL04_009543`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Strict
`TkA03G447050`	`LXL04_009544`	`JCVI_TKOH_00146`	98.0	100.0 / 100.0	Strict
`TkA03G447160`	`LXL04_009545`	`JCVI_TKOH_00146`	99.5	100.0 / 100.0	Strict
`TkA03G447220`	`LXL04_009546`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Strict
`TkA03G447270`	`LXL04_009548`	`JCVI_TKOH_00146`	97.1	100.0 / 100.0	Strict
`TkA03G447280`	`LXL04_009549`	`JCVI_TKOH_00146`	99.2	100.0 / 100.0	Strict
`TkA03G447290`	`LXL04_009550`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Strict
`TkA03G447300`	`LXL04_009551`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Strict
`TkA03G448300`	`LXL04_009555`	`JCVI_TKOH_00146`	99.4	100.0 / 100.0	Complex
`TkA03G448420`	`LXL04_009557`	`JCVI_TKOH_00146`	61.9	81.183 / 37.562	Complex
`TkA03G448450`	`LXL04_009558`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Strict
`TkA03G448600`	`LXL04_009560`	`JCVI_TKOH_00146`	98.5	100.0 / 100.0	Review
`TkA03G448780`	`LXL04_009564`	`JCVI_TKOH_00146`	99.8	100.0 / 100.0	Complex
`TkA03G448820`	`LXL04_009565`	`JCVI_TKOH_00146`	99.5	100.0 / 100.0	Review
`TkA03G448840`	`LXL04_009566`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Review
`TkA03G448890`	`LXL04_009567`	`JCVI_TKOH_00146`	99.8	100.0 / 100.0	Strict
`TkA03G448900`	`LXL04_009568`	`JCVI_TKOH_00146`	99.8	100.0 / 100.0	Strict
`TkA03G449150`	`LXL04_009569`	`JCVI_TKOH_00146`	99.5	100.0 / 100.0	Complex
`TkA03G449310`	`LXL04_009571`	`JCVI_TKOH_00146`	97.2	90.909 / 46.555	Review
`TkA03G449410`	`LXL04_009571`	`JCVI_TKOH_00146`	95.5	100.0 / 45.065	Review
`TkA03G449470`	`LXL04_009571`	`JCVI_TKOH_00146`	95.5	100.0 / 45.065	Review
`TkA03G449610`	`LXL04_009571`	`JCVI_TKOH_00146`	89.1	77.465 / 20.484	Complex
`TkA03G449660`	`LXL04_009575`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Strict
`TkA03G449680`	`LXL04_009578`	`JCVI_TKOH_00146`	92.9	94.949 / 24.04	Review
`TkA03G449710`	`LXL04_009579`	`JCVI_TKOH_00146`	91.0	97.416 / 72.154	Probable
`TkA03G449740`	`LXL04_009582`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Strict
`TkA03G449800`	`LXL04_009584`	`JCVI_TKOH_00146`	100.0	89.272 / 19.177	Review
`TkA03G449890`	`LXL04_009587`	`JCVI_TKOH_00146`	98.7	99.081 / 65.809	Review
`TkA03G449900`	`LXL04_009589`	`JCVI_TKOH_00146`	87.8	99.102 / 97.653	Review
`TkA03G449940`	`LXL04_009590`	`JCVI_TKOH_00146`	93.4	100.0 / 90.654	Probable
`TkA03G450110`	`LXL04_009591`	`JCVI_TKOH_00146`	99.6	100.0 / 100.0	Strict
`TkA03G450120`	`LXL04_009592`	`JCVI_TKOH_00146`	97.7	100.0 / 100.0	Complex
`TkA03G450160`	`LXL04_009593`	`JCVI_TKOH_00146`	99.5	97.743 / 53.933	Review
`TkA03G450310`	`LXL04_009596`	`JCVI_TKOH_00146`	96.9	100.0 / 100.0	Strict
`TkA03G450320`	`LXL04_009597`	`JCVI_TKOH_00146`	99.3	98.162 / 64.029	Complex
`TkA03G450390`	`LXL04_009599`	`JCVI_TKOH_00146`	100.0	67.857 / 64.407	Complex
`TkA03G450420`	`LXL04_009600`	`JCVI_TKOH_00146`	95.4	93.347 / 67.103	Review
`TkA03G450590`	`LXL04_009603`	`JCVI_TKOH_00146`	98.6	100.0 / 100.0	Strict
`TkA03G450790`	`LXL04_009606`	`JCVI_TKOH_00146`	97.6	100.0 / 100.0	Strict
`TkA03G450830`	`LXL04_009607`	`JCVI_TKOH_00146`	99.8	100.0 / 100.0	Strict
`TkA03G451150`	`LXL04_009609`	`JCVI_TKOH_00146`	100.0	75.824 / 76.384	Review
`TkA03G451170`	`LXL04_009610`	`JCVI_TKOH_00146`	99.5	95.588 / 41.845	Review
`TkA03G451210`	`LXL04_009611`	`JCVI_TKOH_00146`	96.3	100.0 / 100.0	Complex
`TkA03G451230`	`LXL04_009612`	`JCVI_TKOH_00146`	98.9	89.848 / 47.705	Review
`TkA03G451400`	`LXL04_009615`	`JCVI_TKOH_00146`	98.9	100.0 / 100.0	Strict
`TkA03G451440`	`LXL04_009616`	`JCVI_TKOH_00146`	100.0	100.0 / 100.0	Strict
`TkA03G451800`	`LXL04_009621`	`JCVI_TKOH_00146`	99.8	100.0 / 100.0	Strict
`TkA03G451810`	`LXL04_009622`	`JCVI_TKOH_00146`	100.0	98.101 / 71.759	Probable
`TkA03G451910`	`LXL04_009624`	`JCVI_TKOH_00146`	84.1	86.316 / 26.524	Complex
`TkA03G451950`	`LXL04_009626`	`JCVI_TKOH_00146`	100.0	31.653 / 10.396	Review
`TkA03G452080`	`LXL04_009628`	`JCVI_TKOH_00146`	98.1	99.759 / 22.288	Review
`TkA03G452090`	`LXL04_009628`	`JCVI_TKOH_00146`	78.3	98.63 / 14.301	Complex
`TkA03G452250`	`LXL04_009629`	`JCVI_TKOH_00146`	90.2	57.477 / 62.755	Complex
`TkA03G452280`	`LXL04_009630`	`JCVI_TKOH_00146`	63.6	98.585 / 19.676	Complex