Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00094
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 406
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00094

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00094 Chr02 116492276-128171413 Chr03 28524032-40598886 mixed High 200 anchors
Chr02 116492276-128171413 Chr03 28524032-40598886 JCVI_TKOH_00094 · 406 gene pairs TkA02G457240 | LXL04_014003 | 93.2% | multi_source_to_OH1004 | Complex TkA02G457260 | LXL04_014005 | 100.0% | multi_source_to_OH1004 | Complex TkA02G457270 | LXL04_014006 | 90.7% | multi_source_to_OH1004 | Complex TkA02G457280 | LXL04_014008 | 98.0% | sequence_supported_annotation_or_model_conflict | Review TkA02G457350 | LXL04_014009 | 89.7% | multi_source_to_OH1004 | Complex TkA02G457360 | LXL04_014010 | 98.4% | multi_source_to_OH1004 | Complex TkA02G457380 | LXL04_014011 | 89.1% | non_reciprocal_best_hit | Complex TkA02G457390 | LXL04_014012 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA02G457400 | LXL04_014012 | 85.3% | non_reciprocal_best_hit | Complex TkA02G457580 | LXL04_014013 | 94.8% | non_reciprocal_best_hit | Complex TkA02G457760 | LXL04_014015 | 92.2% | multi_source_to_OH1004 | Complex TkA02G457790 | LXL04_014016 | 100.0% | sequence_supported_annotation_or_model_conflict | Review
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00094 Chr02:116492276-128171413 Chr03:28524032-40598886 mixed 406 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 406 · Showing 1–200 · Page 1/3

TkA02G457240 → LXL04_014003
93.2%
TkA02G457260 → LXL04_014005
100.0%
TkA02G457270 → LXL04_014006
90.7%
TkA02G457280 → LXL04_014008
98.0%
TkA02G457350 → LXL04_014009
89.7%
TkA02G457360 → LXL04_014010
98.4%
TkA02G457380 → LXL04_014011
89.1%
TkA02G457390 → LXL04_014012
100.0%
TkA02G457400 → LXL04_014012
85.3%
TkA02G457580 → LXL04_014013
94.8%
TkA02G457760 → LXL04_014015
92.2%
TkA02G457790 → LXL04_014016
100.0%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA02G457240LXL04_014003JCVI_TKOH_0009493.2100.0 / 100.0Complex
TkA02G457260LXL04_014005JCVI_TKOH_00094100.095.808 / 95.427Complex
TkA02G457270LXL04_014006JCVI_TKOH_0009490.796.635 / 90.332Complex
TkA02G457280LXL04_014008JCVI_TKOH_0009498.087.826 / 13.485Review
TkA02G457350LXL04_014009JCVI_TKOH_0009489.780.396 / 52.727Complex
TkA02G457360LXL04_014010JCVI_TKOH_0009498.498.785 / 99.592Complex
TkA02G457380LXL04_014011JCVI_TKOH_0009489.192.143 / 41.573Complex
TkA02G457390LXL04_014012JCVI_TKOH_00094100.0100.0 / 15.938Review
TkA02G457400LXL04_014012JCVI_TKOH_0009485.356.391 / 9.512Complex
TkA02G457580LXL04_014013JCVI_TKOH_0009494.8100.0 / 49.084Complex
TkA02G457760LXL04_014015JCVI_TKOH_0009492.299.806 / 90.223Complex
TkA02G457790LXL04_014016JCVI_TKOH_00094100.092.193 / 51.452Review
TkA02G457830LXL04_013987JCVI_TKOH_00094100.090.951 / 79.919Probable
TkA02G458140LXL04_013986JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G458680LXL04_013987JCVI_TKOH_0009496.055.97 / 10.108Complex
TkA02G458820LXL04_013983JCVI_TKOH_00094100.0100.0 / 60.593Complex
TkA02G459260LXL04_013981JCVI_TKOH_0009499.5100.0 / 100.0Strict
TkA02G459340LXL04_013979JCVI_TKOH_0009499.799.263 / 85.732Strict
TkA02G459480LXL04_013978JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G459520LXL04_013977JCVI_TKOH_0009498.7100.0 / 100.0Complex
TkA02G459530LXL04_013976JCVI_TKOH_00094100.0100.0 / 100.0Review
TkA02G459740LXL04_013972JCVI_TKOH_0009470.499.13 / 72.163Complex
TkA02G459840LXL04_013974JCVI_TKOH_0009478.670.769 / 76.471Complex
TkA02G459850LXL04_013972JCVI_TKOH_0009495.3100.0 / 100.0Complex
TkA02G459860LXL04_013971JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G459870LXL04_013970JCVI_TKOH_0009486.6100.0 / 100.0Complex
TkA02G459930LXL04_013967JCVI_TKOH_0009499.8100.0 / 95.741Complex
TkA02G459990LXL04_013967JCVI_TKOH_0009499.6100.0 / 95.741Complex
TkA02G460090LXL04_013965JCVI_TKOH_0009486.8100.0 / 100.0Complex
TkA02G460110LXL04_013963JCVI_TKOH_00094100.0100.0 / 50.17Review
TkA02G460120LXL04_013962JCVI_TKOH_0009496.096.144 / 75.862Complex
TkA02G460260LXL04_013959JCVI_TKOH_0009482.3100.0 / 24.593Complex
TkA02G460270LXL04_013958JCVI_TKOH_0009497.2100.0 / 97.712Review
TkA02G460440LXL04_013956JCVI_TKOH_0009481.8100.0 / 42.183Complex
TkA02G460510LXL04_013953JCVI_TKOH_0009487.7100.0 / 100.0Review
TkA02G460730LXL04_013952JCVI_TKOH_0009498.882.134 / 99.699Strict
TkA02G460760LXL04_013951JCVI_TKOH_0009496.9100.0 / 51.125Review
TkA02G460770LXL04_013950JCVI_TKOH_0009499.698.812 / 98.93Strict
TkA02G460780LXL04_013949JCVI_TKOH_00094100.0100.0 / 63.257Review
TkA02G461470LXL04_013945JCVI_TKOH_0009497.7100.0 / 100.0Strict
TkA02G461510LXL04_013943JCVI_TKOH_0009499.198.305 / 61.497Review
TkA02G461650LXL04_013942JCVI_TKOH_0009478.798.021 / 98.204Review
TkA02G461990LXL04_013941JCVI_TKOH_0009493.799.153 / 35.364Complex
TkA02G462020LXL04_013941JCVI_TKOH_0009498.2100.0 / 64.339Complex
TkA02G462120LXL04_013940JCVI_TKOH_0009465.6100.0 / 100.0Complex
TkA02G462150LXL04_013937JCVI_TKOH_0009493.4100.0 / 100.0Review
TkA02G462390LXL04_013936JCVI_TKOH_0009493.6100.0 / 100.0Review
TkA02G462740LXL04_013933JCVI_TKOH_0009472.697.248 / 39.207Complex
TkA02G463120LXL04_013932JCVI_TKOH_0009499.8100.0 / 90.625Strict
TkA02G463170LXL04_013931JCVI_TKOH_0009499.9100.0 / 100.0Strict
TkA02G463370LXL04_013930JCVI_TKOH_0009499.397.705 / 84.659Strict
TkA02G463390LXL04_013929JCVI_TKOH_0009499.5100.0 / 100.0Strict
TkA02G463530LXL04_013926JCVI_TKOH_0009483.298.744 / 99.746Complex
TkA02G463560LXL04_013926JCVI_TKOH_0009499.7100.0 / 100.0Complex
TkA02G463710LXL04_013925JCVI_TKOH_0009494.198.077 / 25.888Complex
TkA02G463830LXL04_013925JCVI_TKOH_0009491.1100.0 / 100.0Complex
TkA02G463850LXL04_013925JCVI_TKOH_0009499.7100.0 / 100.0Complex
TkA02G463880LXL04_013924JCVI_TKOH_0009499.782.506 / 100.0Strict
TkA02G463910LXL04_013923JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G463960LXL04_013922JCVI_TKOH_0009498.292.683 / 59.686Review
TkA02G464040LXL04_013921JCVI_TKOH_00094100.096.254 / 96.098Strict
TkA02G464130LXL04_013920JCVI_TKOH_00094100.099.383 / 98.773Strict
TkA02G464650LXL04_013919JCVI_TKOH_0009499.7100.0 / 100.0Strict
TkA02G464850LXL04_013918JCVI_TKOH_0009495.0100.0 / 100.0Strict
TkA02G465030LXL04_013915JCVI_TKOH_0009494.5100.0 / 92.857Probable
TkA02G465330LXL04_013910JCVI_TKOH_0009497.1100.0 / 46.591Review
TkA02G465360LXL04_013909JCVI_TKOH_0009499.799.129 / 73.205Complex
TkA02G465430LXL04_013908JCVI_TKOH_0009499.6100.0 / 40.165Review
TkA02G465460LXL04_013908JCVI_TKOH_0009499.499.375 / 6.904Review
TkA02G465470LXL04_013908JCVI_TKOH_0009499.799.893 / 40.512Review
TkA02G465480LXL04_013907JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G465570LXL04_013903JCVI_TKOH_0009497.7100.0 / 47.466Review
TkA02G465650LXL04_013902JCVI_TKOH_0009499.7100.0 / 72.01Complex
TkA02G465670LXL04_013901JCVI_TKOH_0009481.799.05 / 71.928Review
TkA02G465690LXL04_013900JCVI_TKOH_0009498.1100.0 / 100.0Strict
TkA02G465730LXL04_013894JCVI_TKOH_0009499.480.662 / 100.0Review
TkA02G465740LXL04_013897JCVI_TKOH_0009499.8100.0 / 100.0Strict
TkA02G465940LXL04_013895JCVI_TKOH_0009493.697.895 / 59.955Complex
TkA02G466000LXL04_013894JCVI_TKOH_0009499.480.662 / 100.0Complex
TkA02G466030LXL04_013890JCVI_TKOH_0009497.0100.0 / 100.0Complex
TkA02G466190LXL04_013887JCVI_TKOH_00094100.0100.0 / 100.0Complex
TkA02G466210LXL04_013890JCVI_TKOH_00094100.084.77 / 91.615Complex
TkA02G466270LXL04_013887JCVI_TKOH_0009494.1100.0 / 100.0Complex
TkA02G466600LXL04_013883JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G466650LXL04_013881JCVI_TKOH_0009499.099.158 / 100.0Strict
TkA02G466690LXL04_013879JCVI_TKOH_0009499.0100.0 / 100.0Strict
TkA02G466700LXL04_013878JCVI_TKOH_0009499.7100.0 / 100.0Strict
TkA02G466720LXL04_013877JCVI_TKOH_0009449.493.333 / 69.53Complex
TkA02G466840LXL04_013873JCVI_TKOH_0009499.999.596 / 93.901Strict
TkA02G466850LXL04_013872JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G466880LXL04_013871JCVI_TKOH_00094100.0100.0 / 89.906Strict
TkA02G466890LXL04_013870JCVI_TKOH_0009499.095.098 / 100.0Strict
TkA02G466910LXL04_013869JCVI_TKOH_0009497.557.917 / 57.917Review
TkA02G467260LXL04_013863JCVI_TKOH_0009488.3100.0 / 79.933Complex
TkA02G467390LXL04_013861JCVI_TKOH_0009499.3100.0 / 100.0Complex
TkA02G467400LXL04_013861JCVI_TKOH_0009469.294.15 / 100.0Complex
TkA02G467420LXL04_013858JCVI_TKOH_0009499.5100.0 / 57.057Review
TkA02G467500LXL04_013857JCVI_TKOH_0009498.872.65 / 31.25Complex
TkA02G467510LXL04_013856JCVI_TKOH_00094100.094.872 / 100.0Strict
TkA02G467570LXL04_013854JCVI_TKOH_0009491.799.704 / 91.233Complex
TkA02G467580LXL04_013851JCVI_TKOH_0009475.197.326 / 29.839Complex
TkA02G467760LXL04_013851JCVI_TKOH_0009489.487.225 / 31.452Complex
TkA02G467770LXL04_013851JCVI_TKOH_0009460.198.419 / 66.774Review
TkA02G468100LXL04_013850JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G468110LXL04_013849JCVI_TKOH_0009482.474.631 / 77.665Complex
TkA02G468340LXL04_013845JCVI_TKOH_0009466.764.804 / 75.0Complex
TkA02G468440LXL04_013845JCVI_TKOH_0009479.897.11 / 69.828Complex
TkA02G468780LXL04_013843JCVI_TKOH_00094100.097.276 / 98.425Strict
TkA02G468790LXL04_013842JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G468800LXL04_013841JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G468810LXL04_013840JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G469020LXL04_013838JCVI_TKOH_0009499.0100.0 / 100.0Complex
TkA02G469100LXL04_013837JCVI_TKOH_0009499.7100.0 / 100.0Complex
TkA02G469210LXL04_013832JCVI_TKOH_0009499.7100.0 / 98.511Strict
TkA02G469220LXL04_013830JCVI_TKOH_00094100.0100.0 / 100.0Complex
TkA02G469290LXL04_013829JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G469300LXL04_013828JCVI_TKOH_00094100.0100.0 / 100.0Review
TkA02G469320LXL04_013827JCVI_TKOH_0009498.8100.0 / 100.0Strict
TkA02G469330LXL04_013826JCVI_TKOH_0009499.9100.0 / 100.0Strict
TkA02G469630LXL04_013825JCVI_TKOH_0009470.894.891 / 76.829Complex
TkA02G469640LXL04_013825JCVI_TKOH_00094100.0100.0 / 100.0Complex
TkA02G469650LXL04_013824JCVI_TKOH_0009499.4100.0 / 100.0Strict
TkA02G469810LXL04_013822JCVI_TKOH_0009498.4100.0 / 32.971Review
TkA02G469820LXL04_013821JCVI_TKOH_0009499.096.092 / 10.802Review
TkA02G469830LXL04_013820JCVI_TKOH_0009498.267.063 / 30.249Review
TkA02G470130LXL04_013816JCVI_TKOH_0009499.0100.0 / 100.0Complex
TkA02G470220LXL04_013815JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G470290LXL04_013813JCVI_TKOH_0009499.7100.0 / 92.932Complex
TkA02G470630LXL04_013811JCVI_TKOH_00094100.092.795 / 67.435Review
TkA02G470830LXL04_013810JCVI_TKOH_0009499.2100.0 / 100.0Strict
TkA02G471000LXL04_013807JCVI_TKOH_0009498.492.229 / 79.856Complex
TkA02G471010LXL04_013806JCVI_TKOH_0009499.098.995 / 99.244Review
TkA02G471020LXL04_013805JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G471030LXL04_013804JCVI_TKOH_0009498.3100.0 / 100.0Strict
TkA02G471070LXL04_013803JCVI_TKOH_0009497.2100.0 / 55.635Review
TkA02G471080LXL04_013802JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G471120LXL04_013801JCVI_TKOH_00094100.080.195 / 100.0Complex
TkA02G471160LXL04_013799JCVI_TKOH_0009498.6100.0 / 100.0Complex
TkA02G471170LXL04_013798JCVI_TKOH_0009498.755.147 / 43.103Review
TkA02G471180LXL04_013797JCVI_TKOH_0009492.4100.0 / 96.282Probable
TkA02G471190LXL04_013796JCVI_TKOH_00094100.0100.0 / 77.308Complex
TkA02G471200LXL04_013795JCVI_TKOH_0009499.9100.0 / 100.0Complex
TkA02G471340LXL04_013794JCVI_TKOH_0009499.8100.0 / 100.0Complex
TkA02G471520LXL04_013792JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G471550LXL04_013790JCVI_TKOH_0009498.793.275 / 78.378Probable
TkA02G471560LXL04_013788JCVI_TKOH_0009499.594.835 / 100.0Complex
TkA02G471650LXL04_013786JCVI_TKOH_0009498.146.154 / 46.154Review
TkA02G471720LXL04_013788JCVI_TKOH_0009495.9100.0 / 37.065Review
TkA02G471730LXL04_013783JCVI_TKOH_0009481.140.152 / 25.0Review
TkA02G471850LXL04_013781JCVI_TKOH_0009492.915.315 / 10.18Review
TkA02G471880LXL04_013779JCVI_TKOH_0009499.3100.0 / 100.0Strict
TkA02G472460LXL04_013772JCVI_TKOH_0009481.191.716 / 47.154Complex
TkA02G472480LXL04_013776JCVI_TKOH_0009490.9100.0 / 100.0Probable
TkA02G472800LXL04_013774JCVI_TKOH_0009494.2100.0 / 100.0Probable
TkA02G472880LXL04_013772JCVI_TKOH_0009499.496.654 / 49.898Review
TkA02G472950LXL04_013772JCVI_TKOH_0009445.598.947 / 29.268Complex
TkA02G472970LXL04_013771JCVI_TKOH_00094100.0100.0 / 100.0Review
TkA02G473240LXL04_013769JCVI_TKOH_0009492.3100.0 / 100.0Review
TkA02G473250LXL04_013768JCVI_TKOH_0009499.686.842 / 92.308Strict
TkA02G473260LXL04_013767JCVI_TKOH_0009498.599.247 / 81.077Strict
TkA02G473270LXL04_013766JCVI_TKOH_00094100.0100.0 / 100.0Complex
TkA02G473280LXL04_013765JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G473300LXL04_013764JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G473560LXL04_013762JCVI_TKOH_0009482.1100.0 / 78.771Review
TkA02G473580LXL04_013761JCVI_TKOH_00094100.098.077 / 98.077Strict
TkA02G473620LXL04_013759JCVI_TKOH_0009445.763.776 / 58.177Review
TkA02G473670LXL04_013758JCVI_TKOH_0009453.9100.0 / 72.785Review
TkA02G473780LXL04_013757JCVI_TKOH_0009499.7100.0 / 100.0Strict
TkA02G473790LXL04_013756JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G473810LXL04_013754JCVI_TKOH_0009495.295.674 / 65.505Complex
TkA02G473820LXL04_013755JCVI_TKOH_00094100.091.322 / 29.585Review
TkA02G473830LXL04_013754JCVI_TKOH_0009499.8100.0 / 98.606Review
TkA02G473890LXL04_013752JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G473910LXL04_013748JCVI_TKOH_0009489.198.96 / 70.939Complex
TkA02G474000LXL04_013748JCVI_TKOH_0009471.169.475 / 97.168Review
TkA02G474010LXL04_013745JCVI_TKOH_0009498.6100.0 / 100.0Complex
TkA02G474470LXL04_013741JCVI_TKOH_0009499.6100.0 / 100.0Strict
TkA02G474580LXL04_013740JCVI_TKOH_0009499.6100.0 / 100.0Strict
TkA02G474650LXL04_013738JCVI_TKOH_0009498.1100.0 / 100.0Strict
TkA02G474690LXL04_013736JCVI_TKOH_0009485.7100.0 / 100.0Review
TkA02G474720LXL04_013735JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G474750LXL04_013734JCVI_TKOH_0009499.4100.0 / 32.827Review
TkA02G474760LXL04_013734JCVI_TKOH_0009498.898.99 / 33.794Review
TkA02G474770LXL04_013734JCVI_TKOH_0009497.588.344 / 29.855Review
TkA02G474780LXL04_013733JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G474820LXL04_013732JCVI_TKOH_0009499.5100.0 / 100.0Strict
TkA02G474840LXL04_013731JCVI_TKOH_00094100.097.098 / 89.538Strict
TkA02G474860LXL04_013729JCVI_TKOH_00094100.0100.0 / 92.889Review
TkA02G474920LXL04_013728JCVI_TKOH_0009494.498.734 / 30.435Complex
TkA02G475000LXL04_013727JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G475030LXL04_013726JCVI_TKOH_0009498.9100.0 / 54.949Review
TkA02G475520LXL04_013725JCVI_TKOH_0009493.098.973 / 38.353Complex
TkA02G475980LXL04_013723JCVI_TKOH_0009495.4100.0 / 100.0Complex
TkA02G476020LXL04_013722JCVI_TKOH_00094100.0100.0 / 100.0Strict
TkA02G476050LXL04_013723JCVI_TKOH_0009482.799.588 / 53.027Complex
TkA02G476100LXL04_013721JCVI_TKOH_0009493.2100.0 / 68.692Complex
TkA02G476110LXL04_013723JCVI_TKOH_0009483.5100.0 / 53.236Complex
TkA02G476570LXL04_013718JCVI_TKOH_0009499.192.573 / 58.754Review
TkA02G476580LXL04_013718JCVI_TKOH_00094100.089.944 / 27.104Review
TkA02G476590LXL04_013717JCVI_TKOH_00094100.0100.0 / 100.0Strict