Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00206

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 115

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00206

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00206 Chr04 115597201-120906518 Chr09 49142060-53665269 mixed High 115 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00206`	Chr04:115597201-120906518	Chr09:49142060-53665269	mixed	115	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 115 · Showing 1–115 · Page 1/1

Download All Anchors TSV

TkA04G458560 → LXL04_038749

98.8%

TkA04G458570 → LXL04_038750

97.9%

TkA04G460120 → LXL04_038751

62.2%

TkA04G460210 → LXL04_038734

99.8%

TkA04G460220 → LXL04_038737

98.7%

TkA04G460840 → LXL04_038740

97.9%

TkA04G460950 → LXL04_038741

100.0%

TkA04G461090 → LXL04_038742

100.0%

TkA04G461400 → LXL04_038747

100.0%

TkA04G461700 → LXL04_038749

98.8%

TkA04G461720 → LXL04_038750

94.8%

TkA04G461770 → LXL04_038751

99.4%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA04G458560`	`LXL04_038749`	`JCVI_TKOH_00206`	98.8	100.0 / 71.47	Complex
`TkA04G458570`	`LXL04_038750`	`JCVI_TKOH_00206`	97.9	91.422 / 50.134	Review
`TkA04G460120`	`LXL04_038751`	`JCVI_TKOH_00206`	62.2	98.113 / 82.412	Complex
`TkA04G460210`	`LXL04_038734`	`JCVI_TKOH_00206`	99.8	100.0 / 100.0	Strict
`TkA04G460220`	`LXL04_038737`	`JCVI_TKOH_00206`	98.7	83.465 / 67.089	Review
`TkA04G460840`	`LXL04_038740`	`JCVI_TKOH_00206`	97.9	98.295 / 87.812	Complex
`TkA04G460950`	`LXL04_038741`	`JCVI_TKOH_00206`	100.0	84.956 / 95.05	Strict
`TkA04G461090`	`LXL04_038742`	`JCVI_TKOH_00206`	100.0	100.0 / 100.0	Review
`TkA04G461400`	`LXL04_038747`	`JCVI_TKOH_00206`	100.0	100.0 / 100.0	Complex
`TkA04G461700`	`LXL04_038749`	`JCVI_TKOH_00206`	98.8	100.0 / 99.424	Review
`TkA04G461720`	`LXL04_038750`	`JCVI_TKOH_00206`	94.8	92.593 / 51.613	Complex
`TkA04G461770`	`LXL04_038751`	`JCVI_TKOH_00206`	99.4	100.0 / 90.452	Complex
`TkA04G462540`	`LXL04_038753`	`JCVI_TKOH_00206`	99.0	100.0 / 100.0	Strict
`TkA04G462550`	`LXL04_038754`	`JCVI_TKOH_00206`	93.7	100.0 / 100.0	Complex
`TkA04G462660`	`LXL04_038757`	`JCVI_TKOH_00206`	98.0	98.653 / 94.003	Complex
`TkA04G462690`	`LXL04_038760`	`JCVI_TKOH_00206`	99.9	100.0 / 100.0	Strict
`TkA04G462720`	`LXL04_038761`	`JCVI_TKOH_00206`	99.1	100.0 / 100.0	Complex
`TkA04G462760`	`LXL04_038762`	`JCVI_TKOH_00206`	100.0	100.0 / 100.0	Complex
`TkA04G462950`	`LXL04_038766`	`JCVI_TKOH_00206`	94.8	15.732 / 20.354	Complex
`TkA04G462970`	`LXL04_038766`	`JCVI_TKOH_00206`	73.7	98.667 / 71.327	Complex
`TkA04G462980`	`LXL04_038778`	`JCVI_TKOH_00206`	83.6	95.758 / 79.899	Review
`TkA04G463210`	`LXL04_038777`	`JCVI_TKOH_00206`	78.6	90.749 / 72.628	Complex
`TkA04G463250`	`LXL04_038766`	`JCVI_TKOH_00206`	93.2	97.959 / 44.248	Complex
`TkA04G463260`	`LXL04_038767`	`JCVI_TKOH_00206`	96.0	87.719 / 78.125	Probable
`TkA04G463270`	`LXL04_038766`	`JCVI_TKOH_00206`	83.0	52.381 / 15.575	Complex
`TkA04G463400`	`LXL04_038766`	`JCVI_TKOH_00206`	80.9	100.0 / 62.478	Complex
`TkA04G463410`	`LXL04_038778`	`JCVI_TKOH_00206`	89.1	62.5 / 55.276	Complex
`TkA04G463420`	`LXL04_038770`	`JCVI_TKOH_00206`	97.3	100.0 / 100.0	Complex
`TkA04G463630`	`LXL04_038766`	`JCVI_TKOH_00206`	84.3	98.438 / 77.522	Review
`TkA04G463830`	`LXL04_038779`	`JCVI_TKOH_00206`	87.6	100.0 / 100.0	Complex
`TkA04G464120`	`LXL04_038781`	`JCVI_TKOH_00206`	97.2	100.0 / 86.893	Strict
`TkA04G465070`	`LXL04_038783`	`JCVI_TKOH_00206`	96.3	93.035 / 86.175	Strict
`TkA04G465200`	`LXL04_038785`	`JCVI_TKOH_00206`	100.0	100.0 / 100.0	Strict
`TkA04G465460`	`LXL04_038788`	`JCVI_TKOH_00206`	98.3	98.248 / 80.184	Complex
`TkA04G465810`	`LXL04_038790`	`JCVI_TKOH_00206`	99.8	94.606 / 94.215	Complex
`TkA04G465830`	`LXL04_038791`	`JCVI_TKOH_00206`	98.5	100.0 / 100.0	Strict
`TkA04G465900`	`LXL04_038794`	`JCVI_TKOH_00206`	97.4	100.0 / 97.99	Strict
`TkA04G467550`	`LXL04_038799`	`JCVI_TKOH_00206`	98.7	100.0 / 100.0	Review
`TkA04G467630`	`LXL04_038800`	`JCVI_TKOH_00206`	95.6	100.0 / 100.0	Review
`TkA04G468000`	`LXL04_038804`	`JCVI_TKOH_00206`	59.7	100.0 / 96.951	Review
`TkA04G468170`	`LXL04_038805`	`JCVI_TKOH_00206`	97.2	100.0 / 100.0	Strict
`TkA04G468180`	`LXL04_038806`	`JCVI_TKOH_00206`	98.0	100.0 / 95.872	Strict
`TkA04G468190`	`LXL04_038807`	`JCVI_TKOH_00206`	97.8	100.0 / 100.0	Strict
`TkA04G468220`	`LXL04_038811`	`JCVI_TKOH_00206`	98.9	100.0 / 100.0	Strict
`TkA04G468260`	`LXL04_038812`	`JCVI_TKOH_00206`	93.6	100.0 / 91.005	Probable
`TkA04G468320`	`LXL04_038818`	`JCVI_TKOH_00206`	100.0	100.0 / 100.0	Strict
`TkA04G469000`	`LXL04_038825`	`JCVI_TKOH_00206`	71.2	100.0 / 43.495	Complex
`TkA04G469080`	`LXL04_038825`	`JCVI_TKOH_00206`	79.5	95.681 / 28.965	Complex
`TkA04G469620`	`LXL04_038827`	`JCVI_TKOH_00206`	98.5	100.0 / 94.394	Strict
`TkA04G469690`	`LXL04_038828`	`JCVI_TKOH_00206`	83.6	100.0 / 55.094	Complex
`TkA04G469890`	`LXL04_038833`	`JCVI_TKOH_00206`	99.0	84.211 / 84.091	Strict
`TkA04G469900`	`LXL04_038834`	`JCVI_TKOH_00206`	96.2	99.75 / 63.366	Complex
`TkA04G470000`	`LXL04_038837`	`JCVI_TKOH_00206`	99.8	100.0 / 79.584	Complex
`TkA04G470070`	`LXL04_038838`	`JCVI_TKOH_00206`	99.8	100.0 / 100.0	Strict
`TkA04G470090`	`LXL04_038839`	`JCVI_TKOH_00206`	99.4	83.333 / 87.766	Strict
`TkA04G470240`	`LXL04_038840`	`JCVI_TKOH_00206`	97.9	99.661 / 94.915	Strict
`TkA04G470320`	`LXL04_038841`	`JCVI_TKOH_00206`	99.8	100.0 / 96.701	Strict
`TkA04G470340`	`LXL04_038842`	`JCVI_TKOH_00206`	99.1	100.0 / 100.0	Strict
`TkA04G470750`	`LXL04_038845`	`JCVI_TKOH_00206`	99.8	100.0 / 100.0	Complex
`TkA04G471200`	`LXL04_038845`	`JCVI_TKOH_00206`	77.3	97.663 / 98.49	Complex
`TkA04G471510`	`LXL04_038847`	`JCVI_TKOH_00206`	99.7	96.87 / 99.388	Complex
`TkA04G471540`	`LXL04_038848`	`JCVI_TKOH_00206`	99.2	100.0 / 100.0	Complex
`TkA04G471590`	`LXL04_038849`	`JCVI_TKOH_00206`	85.8	95.692 / 46.429	Complex
`TkA04G471610`	`LXL04_038850`	`JCVI_TKOH_00206`	100.0	100.0 / 56.436	Review
`TkA04G471630`	`LXL04_038858`	`JCVI_TKOH_00206`	82.1	99.329 / 28.325	Complex
`TkA04G471660`	`LXL04_038854`	`JCVI_TKOH_00206`	99.6	95.05 / 45.412	Review
`TkA04G471670`	`LXL04_038858`	`JCVI_TKOH_00206`	98.8	98.58 / 46.507	Review
`TkA04G471680`	`LXL04_038855`	`JCVI_TKOH_00206`	100.0	91.404 / 100.0	Complex
`TkA04G471690`	`LXL04_038860`	`JCVI_TKOH_00206`	99.8	100.0 / 100.0	Review
`TkA04G471840`	`LXL04_038861`	`JCVI_TKOH_00206`	100.0	100.0 / 100.0	Review
`TkA04G471850`	`LXL04_038862`	`JCVI_TKOH_00206`	99.5	99.541 / 60.615	Complex
`TkA04G472270`	`LXL04_038864`	`JCVI_TKOH_00206`	97.5	100.0 / 100.0	Strict
`TkA04G472620`	`LXL04_038865`	`JCVI_TKOH_00206`	100.0	100.0 / 100.0	Strict
`TkA04G472630`	`LXL04_038866`	`JCVI_TKOH_00206`	98.8	99.618 / 89.673	Strict
`TkA04G472700`	`LXL04_038867`	`JCVI_TKOH_00206`	97.0	100.0 / 95.868	Strict
`TkA04G472710`	`LXL04_038868`	`JCVI_TKOH_00206`	99.5	100.0 / 100.0	Strict
`TkA04G472720`	`LXL04_038869`	`JCVI_TKOH_00206`	99.4	100.0 / 100.0	Strict
`TkA04G472730`	`LXL04_038870`	`JCVI_TKOH_00206`	100.0	47.802 / 35.656	Review
`TkA04G472840`	`LXL04_038874`	`JCVI_TKOH_00206`	99.3	92.188 / 98.333	Strict
`TkA04G472850`	`LXL04_038876`	`JCVI_TKOH_00206`	97.8	100.0 / 100.0	Strict
`TkA04G473370`	`LXL04_038878`	`JCVI_TKOH_00206`	100.0	100.0 / 100.0	Strict
`TkA04G473380`	`LXL04_038879`	`JCVI_TKOH_00206`	95.5	100.0 / 100.0	Strict
`TkA04G473400`	`LXL04_038880`	`JCVI_TKOH_00206`	93.8	100.0 / 100.0	Probable
`TkA04G473590`	`LXL04_038882`	`JCVI_TKOH_00206`	99.2	100.0 / 100.0	Strict
`TkA04G473600`	`LXL04_038883`	`JCVI_TKOH_00206`	95.0	100.0 / 100.0	Strict
`TkA04G473660`	`LXL04_038884`	`JCVI_TKOH_00206`	99.2	100.0 / 84.946	Complex
`TkA04G473710`	`LXL04_038884`	`JCVI_TKOH_00206`	95.0	100.0 / 100.0	Review
`TkA04G474400`	`LXL04_038884`	`JCVI_TKOH_00206`	84.5	100.0 / 99.642	Complex
`TkA04G474470`	`LXL04_038884`	`JCVI_TKOH_00206`	84.5	100.0 / 99.642	Complex
`TkA04G474560`	`LXL04_038886`	`JCVI_TKOH_00206`	99.2	94.488 / 42.705	Review
`TkA04G474640`	`LXL04_038888`	`JCVI_TKOH_00206`	99.3	100.0 / 90.772	Strict
`TkA04G474970`	`LXL04_038891`	`JCVI_TKOH_00206`	99.7	100.0 / 100.0	Complex
`TkA04G475070`	`LXL04_038893`	`JCVI_TKOH_00206`	100.0	100.0 / 100.0	Strict
`TkA04G475580`	`LXL04_038898`	`JCVI_TKOH_00206`	98.9	70.4 / 62.238	Review
`TkA04G475900`	`LXL04_038901`	`JCVI_TKOH_00206`	98.8	100.0 / 100.0	Complex
`TkA04G476670`	`LXL04_038910`	`JCVI_TKOH_00206`	99.0	99.743 / 73.905	Probable
`TkA04G476700`	`LXL04_038911`	`JCVI_TKOH_00206`	99.4	98.898 / 81.406	Strict
`TkA04G476990`	`LXL04_038913`	`JCVI_TKOH_00206`	100.0	93.088 / 79.528	Probable
`TkA04G477020`	`LXL04_038916`	`JCVI_TKOH_00206`	99.6	100.0 / 100.0	Complex
`TkA04G477110`	`LXL04_038916`	`JCVI_TKOH_00206`	59.8	96.93 / 88.511	Complex
`TkA04G477570`	`LXL04_038918`	`JCVI_TKOH_00206`	100.0	100.0 / 100.0	Review
`TkA04G477840`	`LXL04_038920`	`JCVI_TKOH_00206`	98.7	97.034 / 98.707	Complex
`TkA04G478010`	`LXL04_038921`	`JCVI_TKOH_00206`	97.0	100.0 / 100.0	Review
`TkA04G478030`	`LXL04_038922`	`JCVI_TKOH_00206`	90.0	100.0 / 100.0	Review
`TkA04G478140`	`LXL04_038925`	`JCVI_TKOH_00206`	99.8	100.0 / 100.0	Complex
`TkA04G478230`	`LXL04_038926`	`JCVI_TKOH_00206`	99.7	100.0 / 100.0	Complex
`TkA04G478240`	`LXL04_038927`	`JCVI_TKOH_00206`	99.3	100.0 / 100.0	Complex
`TkA04G478290`	`LXL04_038928`	`JCVI_TKOH_00206`	100.0	100.0 / 100.0	Complex
`TkA04G478300`	`LXL04_038929`	`JCVI_TKOH_00206`	98.6	100.0 / 100.0	Review
`TkA04G478360`	`LXL04_038932`	`JCVI_TKOH_00206`	98.9	100.0 / 100.0	Complex
`TkA04G478400`	`LXL04_038933`	`JCVI_TKOH_00206`	99.7	99.721 / 84.198	Complex
`TkA04G478410`	`LXL04_038934`	`JCVI_TKOH_00206`	77.8	99.01 / 67.742	Complex
`TkA04G478440`	`LXL04_038935`	`JCVI_TKOH_00206`	85.5	98.824 / 31.882	Complex
`TkA04G478450`	`LXL04_038935`	`JCVI_TKOH_00206`	98.5	96.016 / 39.113	Review
`TkA04G478500`	`LXL04_038936`	`JCVI_TKOH_00206`	99.0	100.0 / 100.0	Review