Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00010

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 125

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00010

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00010 Chr01 32888165-41106233 Chr01 133995237-141632204 mixed High 125 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00010`	Chr01:32888165-41106233	Chr01:133995237-141632204	mixed	125	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 125 · Showing 1–125 · Page 1/1

Download All Anchors TSV

TkA01G130290 → LXL04_004615

72.4%

TkA01G130530 → LXL04_004615

71.3%

TkA01G130540 → LXL04_004615

67.0%

TkA01G130620 → LXL04_004614

96.3%

TkA01G130630 → LXL04_004613

96.4%

TkA01G130640 → LXL04_004611

98.2%

TkA01G130660 → LXL04_004610

100.0%

TkA01G130850 → LXL04_004608

100.0%

TkA01G130870 → LXL04_004607

100.0%

TkA01G131020 → LXL04_004604

100.0%

TkA01G131070 → LXL04_004602

74.4%

TkA01G131170 → LXL04_004599

100.0%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA01G130290`	`LXL04_004615`	`JCVI_TKOH_00010`	72.4	99.721 / 100.0	Complex
`TkA01G130530`	`LXL04_004615`	`JCVI_TKOH_00010`	71.3	99.689 / 88.579	Complex
`TkA01G130540`	`LXL04_004615`	`JCVI_TKOH_00010`	67.0	81.203 / 30.362	Complex
`TkA01G130620`	`LXL04_004614`	`JCVI_TKOH_00010`	96.3	100.0 / 100.0	Strict
`TkA01G130630`	`LXL04_004613`	`JCVI_TKOH_00010`	96.4	100.0 / 100.0	Strict
`TkA01G130640`	`LXL04_004611`	`JCVI_TKOH_00010`	98.2	100.0 / 100.0	Strict
`TkA01G130660`	`LXL04_004610`	`JCVI_TKOH_00010`	100.0	100.0 / 100.0	Strict
`TkA01G130850`	`LXL04_004608`	`JCVI_TKOH_00010`	100.0	100.0 / 100.0	Strict
`TkA01G130870`	`LXL04_004607`	`JCVI_TKOH_00010`	100.0	100.0 / 40.541	Review
`TkA01G131020`	`LXL04_004604`	`JCVI_TKOH_00010`	100.0	100.0 / 16.063	Review
`TkA01G131070`	`LXL04_004602`	`JCVI_TKOH_00010`	74.4	79.141 / 78.205	Review
`TkA01G131170`	`LXL04_004599`	`JCVI_TKOH_00010`	100.0	48.875 / 48.875	Review
`TkA01G131620`	`LXL04_004596`	`JCVI_TKOH_00010`	71.2	100.0 / 87.925	Review
`TkA01G131780`	`LXL04_004595`	`JCVI_TKOH_00010`	100.0	100.0 / 100.0	Strict
`TkA01G131810`	`LXL04_004594`	`JCVI_TKOH_00010`	100.0	100.0 / 100.0	Strict
`TkA01G131840`	`LXL04_004593`	`JCVI_TKOH_00010`	100.0	100.0 / 100.0	Strict
`TkA01G131880`	`LXL04_004592`	`JCVI_TKOH_00010`	99.9	99.881 / 58.0	Review
`TkA01G131920`	`LXL04_004591`	`JCVI_TKOH_00010`	99.5	66.883 / 99.038	Review
`TkA01G132030`	`LXL04_004592`	`JCVI_TKOH_00010`	93.1	90.937 / 20.897	Complex
`TkA01G132050`	`LXL04_004592`	`JCVI_TKOH_00010`	100.0	92.126 / 8.069	Review
`TkA01G132060`	`LXL04_004592`	`JCVI_TKOH_00010`	94.3	93.72 / 13.379	Complex
`TkA01G132420`	`LXL04_004584`	`JCVI_TKOH_00010`	99.0	56.111 / 28.291	Review
`TkA01G132610`	`LXL04_004581`	`JCVI_TKOH_00010`	100.0	100.0 / 52.5	Review
`TkA01G132620`	`LXL04_004580`	`JCVI_TKOH_00010`	100.0	100.0 / 100.0	Strict
`TkA01G132810`	`LXL04_004576`	`JCVI_TKOH_00010`	73.5	100.0 / 80.997	Review
`TkA01G132850`	`LXL04_004575`	`JCVI_TKOH_00010`	100.0	100.0 / 100.0	Complex
`TkA01G132880`	`LXL04_004574`	`JCVI_TKOH_00010`	96.7	100.0 / 100.0	Complex
`TkA01G132960`	`LXL04_004573`	`JCVI_TKOH_00010`	37.1	99.713 / 95.371	Complex
`TkA01G133000`	`LXL04_004573`	`JCVI_TKOH_00010`	47.5	89.241 / 43.484	Complex
`TkA01G133020`	`LXL04_004568`	`JCVI_TKOH_00010`	96.0	100.0 / 100.0	Strict
`TkA01G133050`	`LXL04_004567`	`JCVI_TKOH_00010`	97.0	100.0 / 100.0	Strict
`TkA01G133330`	`LXL04_004565`	`JCVI_TKOH_00010`	99.3	99.779 / 99.779	Strict
`TkA01G134250`	`LXL04_004554`	`JCVI_TKOH_00010`	100.0	100.0 / 100.0	Review
`TkA01G134510`	`LXL04_004551`	`JCVI_TKOH_00010`	97.7	41.951 / 16.797	Complex
`TkA01G135970`	`LXL04_004549`	`JCVI_TKOH_00010`	100.0	100.0 / 88.633	Complex
`TkA01G136000`	`LXL04_004549`	`JCVI_TKOH_00010`	74.6	99.815 / 88.468	Complex
`TkA01G136110`	`LXL04_004549`	`JCVI_TKOH_00010`	78.1	100.0 / 88.633	Complex
`TkA01G136710`	`LXL04_004539`	`JCVI_TKOH_00010`	98.4	87.549 / 72.862	Complex
`TkA01G136720`	`LXL04_004538`	`JCVI_TKOH_00010`	78.5	92.683 / 32.085	Review
`TkA01G136770`	`LXL04_004537`	`JCVI_TKOH_00010`	100.0	100.0 / 97.81	Strict
`TkA01G136780`	`LXL04_004536`	`JCVI_TKOH_00010`	51.6	82.703 / 84.892	Complex
`TkA01G137210`	`LXL04_004532`	`JCVI_TKOH_00010`	94.8	100.0 / 100.0	Probable
`TkA01G138370`	`LXL04_004529`	`JCVI_TKOH_00010`	98.9	100.0 / 100.0	Complex
`TkA01G138490`	`LXL04_004526`	`JCVI_TKOH_00010`	99.6	100.0 / 100.0	Review
`TkA01G138720`	`LXL04_004524`	`JCVI_TKOH_00010`	93.3	100.0 / 44.925	Complex
`TkA01G138870`	`LXL04_004522`	`JCVI_TKOH_00010`	99.4	100.0 / 100.0	Strict
`TkA01G138910`	`LXL04_004521`	`JCVI_TKOH_00010`	99.7	100.0 / 100.0	Strict
`TkA01G138970`	`LXL04_004518`	`JCVI_TKOH_00010`	99.6	94.539 / 100.0	Strict
`TkA01G138980`	`LXL04_004517`	`JCVI_TKOH_00010`	100.0	98.891 / 100.0	Strict
`TkA01G139280`	`LXL04_004512`	`JCVI_TKOH_00010`	95.1	92.258 / 40.741	Review
`TkA01G139380`	`LXL04_004509`	`JCVI_TKOH_00010`	69.9	97.07 / 37.365	Complex
`TkA01G140800`	`LXL04_004503`	`JCVI_TKOH_00010`	100.0	100.0 / 100.0	Strict
`TkA01G141070`	`LXL04_004501`	`JCVI_TKOH_00010`	99.6	100.0 / 100.0	Strict
`TkA01G141100`	`LXL04_004498`	`JCVI_TKOH_00010`	100.0	100.0 / 93.734	Strict
`TkA01G141110`	`LXL04_004497`	`JCVI_TKOH_00010`	100.0	100.0 / 100.0	Strict
`TkA01G141190`	`LXL04_004496`	`JCVI_TKOH_00010`	99.9	100.0 / 100.0	Complex
`TkA01G141750`	`LXL04_004524`	`JCVI_TKOH_00010`	99.4	93.993 / 100.0	Review
`TkA01G141890`	`LXL04_004526`	`JCVI_TKOH_00010`	99.6	100.0 / 100.0	Complex
`TkA01G142050`	`LXL04_004529`	`JCVI_TKOH_00010`	98.9	100.0 / 100.0	Complex
`TkA01G142830`	`LXL04_004470`	`JCVI_TKOH_00010`	99.8	99.778 / 100.0	Strict
`TkA01G143190`	`LXL04_004469`	`JCVI_TKOH_00010`	97.9	98.621 / 76.882	Complex
`TkA01G143780`	`LXL04_004491`	`JCVI_TKOH_00010`	68.2	100.0 / 100.0	Review
`TkA01G145170`	`LXL04_004487`	`JCVI_TKOH_00010`	95.6	85.979 / 64.571	Complex
`TkA01G145430`	`LXL04_004483`	`JCVI_TKOH_00010`	99.5	93.056 / 41.875	Review
`TkA01G145570`	`LXL04_004482`	`JCVI_TKOH_00010`	100.0	100.0 / 100.0	Strict
`TkA01G145650`	`LXL04_004481`	`JCVI_TKOH_00010`	98.2	96.532 / 48.83	Review
`TkA01G145780`	`LXL04_004478`	`JCVI_TKOH_00010`	98.0	99.077 / 77.176	Complex
`TkA01G145790`	`LXL04_004479`	`JCVI_TKOH_00010`	95.6	100.0 / 97.381	Strict
`TkA01G146430`	`LXL04_004474`	`JCVI_TKOH_00010`	100.0	100.0 / 78.261	Complex
`TkA01G147280`	`LXL04_004461`	`JCVI_TKOH_00010`	99.7	100.0 / 100.0	Complex
`TkA01G147370`	`LXL04_004460`	`JCVI_TKOH_00010`	96.7	90.909 / 100.0	Complex
`TkA01G147380`	`LXL04_004459`	`JCVI_TKOH_00010`	96.8	100.0 / 100.0	Complex
`TkA01G147610`	`LXL04_004456`	`JCVI_TKOH_00010`	99.8	100.0 / 100.0	Strict
`TkA01G147620`	`LXL04_004454`	`JCVI_TKOH_00010`	99.2	100.0 / 100.0	Complex
`TkA01G147720`	`LXL04_004450`	`JCVI_TKOH_00010`	80.6	99.083 / 46.429	Complex
`TkA01G147760`	`LXL04_004452`	`JCVI_TKOH_00010`	100.0	19.048 / 10.596	Complex
`TkA01G147800`	`LXL04_004449`	`JCVI_TKOH_00010`	88.1	95.612 / 94.868	Complex
`TkA01G147870`	`LXL04_004449`	`JCVI_TKOH_00010`	85.1	65.437 / 88.026	Complex
`TkA01G147880`	`LXL04_004451`	`JCVI_TKOH_00010`	99.5	100.0 / 100.0	Strict
`TkA01G148100`	`LXL04_004449`	`JCVI_TKOH_00010`	97.6	82.722 / 92.368	Complex
`TkA01G148470`	`LXL04_004447`	`JCVI_TKOH_00010`	98.8	100.0 / 100.0	Review
`TkA01G148610`	`LXL04_004446`	`JCVI_TKOH_00010`	100.0	100.0 / 100.0	Complex
`TkA01G148710`	`LXL04_004443`	`JCVI_TKOH_00010`	76.6	97.816 / 84.254	Complex
`TkA01G148850`	`LXL04_004439`	`JCVI_TKOH_00010`	92.8	99.107 / 49.554	Review
`TkA01G149140`	`LXL04_004438`	`JCVI_TKOH_00010`	96.6	100.0 / 100.0	Strict
`TkA01G149540`	`LXL04_004437`	`JCVI_TKOH_00010`	87.8	91.328 / 78.465	Complex
`TkA01G150030`	`LXL04_004436`	`JCVI_TKOH_00010`	99.7	100.0 / 100.0	Complex
`TkA01G150490`	`LXL04_004430`	`JCVI_TKOH_00010`	99.6	100.0 / 100.0	Complex
`TkA01G150530`	`LXL04_004429`	`JCVI_TKOH_00010`	98.8	99.277 / 100.0	Complex
`TkA01G151150`	`LXL04_004426`	`JCVI_TKOH_00010`	99.5	100.0 / 67.786	Complex
`TkA01G151190`	`LXL04_004425`	`JCVI_TKOH_00010`	99.5	92.558 / 57.849	Review
`TkA01G151200`	`LXL04_004449`	`JCVI_TKOH_00010`	97.4	37.087 / 25.0	Complex
`TkA01G151350`	`LXL04_004448`	`JCVI_TKOH_00010`	86.3	98.077 / 70.482	Review
`TkA01G151670`	`LXL04_004447`	`JCVI_TKOH_00010`	92.9	100.0 / 100.0	Complex
`TkA01G151920`	`LXL04_004446`	`JCVI_TKOH_00010`	100.0	100.0 / 100.0	Complex
`TkA01G152310`	`LXL04_004443`	`JCVI_TKOH_00010`	76.5	97.738 / 81.96	Complex
`TkA01G152400`	`LXL04_004439`	`JCVI_TKOH_00010`	93.7	99.107 / 49.554	Complex
`TkA01G153830`	`LXL04_004436`	`JCVI_TKOH_00010`	99.5	100.0 / 100.0	Complex
`TkA01G154810`	`LXL04_004430`	`JCVI_TKOH_00010`	98.4	98.81 / 99.203	Complex
`TkA01G154870`	`LXL04_004429`	`JCVI_TKOH_00010`	99.0	99.277 / 100.0	Complex
`TkA01G155380`	`LXL04_004428`	`JCVI_TKOH_00010`	98.4	100.0 / 100.0	Complex
`TkA01G156020`	`LXL04_004409`	`JCVI_TKOH_00010`	100.0	67.943 / 38.904	Review
`TkA01G156350`	`LXL04_004403`	`JCVI_TKOH_00010`	92.6	100.0 / 100.0	Complex
`TkA01G156460`	`LXL04_004403`	`JCVI_TKOH_00010`	100.0	100.0 / 100.0	Review
`TkA01G156790`	`LXL04_004399`	`JCVI_TKOH_00010`	98.9	100.0 / 89.731	Complex
`TkA01G156800`	`LXL04_004398`	`JCVI_TKOH_00010`	97.1	100.0 / 100.0	Complex
`TkA01G156870`	`LXL04_004396`	`JCVI_TKOH_00010`	99.2	100.0 / 100.0	Complex
`TkA01G156880`	`LXL04_004395`	`JCVI_TKOH_00010`	93.2	100.0 / 82.343	Complex
`TkA01G156890`	`LXL04_004395`	`JCVI_TKOH_00010`	100.0	100.0 / 6.993	Review
`TkA01G157000`	`LXL04_004414`	`JCVI_TKOH_00010`	99.3	52.281 / 99.638	Review
`TkA01G157670`	`LXL04_004409`	`JCVI_TKOH_00010`	100.0	67.943 / 38.904	Complex
`TkA01G157730`	`LXL04_004408`	`JCVI_TKOH_00010`	91.0	100.0 / 100.0	Probable
`TkA01G157990`	`LXL04_004403`	`JCVI_TKOH_00010`	100.0	100.0 / 100.0	Complex
`TkA01G158530`	`LXL04_004399`	`JCVI_TKOH_00010`	98.8	100.0 / 89.731	Complex
`TkA01G158540`	`LXL04_004398`	`JCVI_TKOH_00010`	96.6	100.0 / 100.0	Complex
`TkA01G158570`	`LXL04_004396`	`JCVI_TKOH_00010`	99.2	100.0 / 100.0	Complex
`TkA01G158580`	`LXL04_004395`	`JCVI_TKOH_00010`	93.2	100.0 / 82.343	Complex
`TkA01G158590`	`LXL04_004395`	`JCVI_TKOH_00010`	100.0	100.0 / 6.993	Review
`TkA01G159070`	`LXL04_004393`	`JCVI_TKOH_00010`	99.1	100.0 / 100.0	Strict
`TkA01G159320`	`LXL04_004391`	`JCVI_TKOH_00010`	98.9	100.0 / 100.0	Complex
`TkA01G159740`	`LXL04_004390`	`JCVI_TKOH_00010`	100.0	89.815 / 54.802	Review
`TkA01G160500`	`LXL04_004385`	`JCVI_TKOH_00010`	99.0	88.288 / 96.078	Review
`TkA01G160630`	`LXL04_004384`	`JCVI_TKOH_00010`	98.3	97.458 / 27.316	Review
`TkA01G160770`	`LXL04_004381`	`JCVI_TKOH_00010`	98.9	99.515 / 87.482	Complex
`TkA01G160780`	`LXL04_004380`	`JCVI_TKOH_00010`	99.4	100.0 / 100.0	Complex