Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00338

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 368

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00338

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00338 Chr08 4260402-14096744 Chr04 100236-9598295 mixed High 168 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00338`	Chr08:4260402-14096744	Chr04:100236-9598295	mixed	368	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 368 · Showing 201–368 · Page 2/2

Previous Download All Anchors TSV

TkA08G038400 → LXL04_017941

99.8%

TkA08G038410 → LXL04_017940

99.4%

TkA08G038420 → LXL04_017939

99.2%

TkA08G038660 → LXL04_017936

90.8%

TkA08G038670 → LXL04_017935

100.0%

TkA08G038680 → LXL04_017931

64.5%

TkA08G038690 → LXL04_017933

99.6%

TkA08G038700 → LXL04_017932

100.0%

TkA08G038730 → LXL04_017932

89.9%

TkA08G039140 → LXL04_017931

99.3%

TkA08G039810 → LXL04_017927

75.7%

TkA08G039900 → LXL04_017927

65.0%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA08G038400`	`LXL04_017941`	`JCVI_TKOH_00338`	99.8	100.0 / 100.0	Strict
`TkA08G038410`	`LXL04_017940`	`JCVI_TKOH_00338`	99.4	100.0 / 88.022	Complex
`TkA08G038420`	`LXL04_017939`	`JCVI_TKOH_00338`	99.2	100.0 / 100.0	Complex
`TkA08G038660`	`LXL04_017936`	`JCVI_TKOH_00338`	90.8	86.182 / 63.544	Complex
`TkA08G038670`	`LXL04_017935`	`JCVI_TKOH_00338`	100.0	99.545 / 52.644	Review
`TkA08G038680`	`LXL04_017931`	`JCVI_TKOH_00338`	64.5	95.87 / 65.873	Complex
`TkA08G038690`	`LXL04_017933`	`JCVI_TKOH_00338`	99.6	99.485 / 98.724	Strict
`TkA08G038700`	`LXL04_017932`	`JCVI_TKOH_00338`	100.0	100.0 / 21.333	Review
`TkA08G038730`	`LXL04_017932`	`JCVI_TKOH_00338`	89.9	97.068 / 60.19	Complex
`TkA08G039140`	`LXL04_017931`	`JCVI_TKOH_00338`	99.3	99.78 / 90.079	Review
`TkA08G039810`	`LXL04_017927`	`JCVI_TKOH_00338`	75.7	98.667 / 64.474	Complex
`TkA08G039900`	`LXL04_017927`	`JCVI_TKOH_00338`	65.0	99.494 / 95.175	Complex
`TkA08G039910`	`LXL04_017927`	`JCVI_TKOH_00338`	74.4	99.494 / 95.175	Complex
`TkA08G040060`	`LXL04_017927`	`JCVI_TKOH_00338`	88.5	99.494 / 95.175	Complex
`TkA08G040090`	`LXL04_017926`	`JCVI_TKOH_00338`	100.0	99.672 / 82.162	Strict
`TkA08G040120`	`LXL04_017923`	`JCVI_TKOH_00338`	90.7	39.815 / 46.237	Review
`TkA08G040170`	`LXL04_017922`	`JCVI_TKOH_00338`	92.2	100.0 / 96.172	Probable
`TkA08G040240`	`LXL04_017921`	`JCVI_TKOH_00338`	98.7	100.0 / 73.077	Probable
`TkA08G040420`	`LXL04_017920`	`JCVI_TKOH_00338`	99.2	98.361 / 72.727	Complex
`TkA08G040440`	`LXL04_017919`	`JCVI_TKOH_00338`	99.5	99.372 / 81.884	Strict
`TkA08G040470`	`LXL04_017917`	`JCVI_TKOH_00338`	90.7	100.0 / 100.0	Probable
`TkA08G040870`	`LXL04_017916`	`JCVI_TKOH_00338`	98.3	86.842 / 41.622	Review
`TkA08G040880`	`LXL04_017915`	`JCVI_TKOH_00338`	99.2	99.544 / 80.098	Complex
`TkA08G040930`	`LXL04_017911`	`JCVI_TKOH_00338`	93.7	100.0 / 100.0	Probable
`TkA08G040940`	`LXL04_017910`	`JCVI_TKOH_00338`	93.3	100.0 / 56.891	Complex
`TkA08G040960`	`LXL04_017909`	`JCVI_TKOH_00338`	100.0	99.333 / 78.01	Probable
`TkA08G041090`	`LXL04_017907`	`JCVI_TKOH_00338`	65.7	95.455 / 44.635	Complex
`TkA08G041260`	`LXL04_017907`	`JCVI_TKOH_00338`	100.0	85.256 / 57.082	Review
`TkA08G041370`	`LXL04_017906`	`JCVI_TKOH_00338`	99.1	96.143 / 23.953	Review
`TkA08G041380`	`LXL04_017906`	`JCVI_TKOH_00338`	100.0	100.0 / 14.139	Review
`TkA08G041390`	`LXL04_017906`	`JCVI_TKOH_00338`	98.5	95.714 / 9.197	Review
`TkA08G041400`	`LXL04_017906`	`JCVI_TKOH_00338`	98.7	98.729 / 31.984	Review
`TkA08G041480`	`LXL04_017905`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Strict
`TkA08G041530`	`LXL04_017904`	`JCVI_TKOH_00338`	99.6	100.0 / 100.0	Strict
`TkA08G041650`	`LXL04_017903`	`JCVI_TKOH_00338`	99.2	100.0 / 57.753	Review
`TkA08G041740`	`LXL04_017902`	`JCVI_TKOH_00338`	72.8	97.403 / 64.524	Complex
`TkA08G041910`	`LXL04_017901`	`JCVI_TKOH_00338`	99.4	90.833 / 28.709	Review
`TkA08G041930`	`LXL04_017900`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Strict
`TkA08G042150`	`LXL04_017899`	`JCVI_TKOH_00338`	100.0	100.0 / 99.2	Strict
`TkA08G042160`	`LXL04_017898`	`JCVI_TKOH_00338`	99.3	100.0 / 51.211	Review
`TkA08G042170`	`LXL04_017897`	`JCVI_TKOH_00338`	99.8	99.325 / 50.776	Review
`TkA08G042190`	`LXL04_017897`	`JCVI_TKOH_00338`	100.0	99.306 / 49.31	Review
`TkA08G042340`	`LXL04_017896`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Strict
`TkA08G042700`	`LXL04_017886`	`JCVI_TKOH_00338`	95.7	100.0 / 99.286	Review
`TkA08G042780`	`LXL04_017887`	`JCVI_TKOH_00338`	92.9	94.872 / 86.154	Complex
`TkA08G042800`	`LXL04_017888`	`JCVI_TKOH_00338`	68.2	100.0 / 100.0	Complex
`TkA08G042810`	`LXL04_017889`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Strict
`TkA08G042880`	`LXL04_017887`	`JCVI_TKOH_00338`	92.0	94.872 / 86.154	Complex
`TkA08G042900`	`LXL04_017890`	`JCVI_TKOH_00338`	97.1	100.0 / 99.286	Review
`TkA08G042920`	`LXL04_017891`	`JCVI_TKOH_00338`	89.2	92.373 / 82.27	Complex
`TkA08G042980`	`LXL04_017892`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Strict
`TkA08G043150`	`LXL04_017884`	`JCVI_TKOH_00338`	91.2	100.0 / 100.0	Probable
`TkA08G043270`	`LXL04_017888`	`JCVI_TKOH_00338`	66.4	100.0 / 100.0	Complex
`TkA08G043550`	`LXL04_017882`	`JCVI_TKOH_00338`	100.0	100.0 / 88.384	Strict
`TkA08G043720`	`LXL04_017879`	`JCVI_TKOH_00338`	99.3	100.0 / 100.0	Strict
`TkA08G043740`	`LXL04_017878`	`JCVI_TKOH_00338`	99.5	100.0 / 100.0	Strict
`TkA08G043850`	`LXL04_017875`	`JCVI_TKOH_00338`	97.2	100.0 / 98.249	Complex
`TkA08G044100`	`LXL04_017874`	`JCVI_TKOH_00338`	96.7	100.0 / 100.0	Strict
`TkA08G044290`	`LXL04_017872`	`JCVI_TKOH_00338`	99.9	97.023 / 86.804	Strict
`TkA08G044320`	`LXL04_017871`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Strict
`TkA08G044600`	`LXL04_017870`	`JCVI_TKOH_00338`	96.2	80.247 / 24.299	Review
`TkA08G044630`	`LXL04_017868`	`JCVI_TKOH_00338`	99.3	100.0 / 100.0	Strict
`TkA08G044640`	`LXL04_017867`	`JCVI_TKOH_00338`	99.4	100.0 / 100.0	Strict
`TkA08G044650`	`LXL04_017866`	`JCVI_TKOH_00338`	99.1	99.65 / 99.302	Strict
`TkA08G044700`	`LXL04_017864`	`JCVI_TKOH_00338`	95.2	100.0 / 100.0	Complex
`TkA08G044740`	`LXL04_017862`	`JCVI_TKOH_00338`	95.8	100.0 / 100.0	Strict
`TkA08G045060`	`LXL04_017861`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Review
`TkA08G045100`	`LXL04_017860`	`JCVI_TKOH_00338`	99.0	99.598 / 97.093	Strict
`TkA08G045120`	`LXL04_017859`	`JCVI_TKOH_00338`	98.8	100.0 / 100.0	Strict
`TkA08G045140`	`LXL04_017858`	`JCVI_TKOH_00338`	100.0	99.286 / 52.256	Review
`TkA08G045230`	`LXL04_017853`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Strict
`TkA08G045240`	`LXL04_017852`	`JCVI_TKOH_00338`	100.0	81.78 / 75.097	Probable
`TkA08G045290`	`LXL04_017851`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Complex
`TkA08G045300`	`LXL04_017850`	`JCVI_TKOH_00338`	95.9	100.0 / 93.455	Strict
`TkA08G045340`	`LXL04_017849`	`JCVI_TKOH_00338`	99.3	95.973 / 96.949	Complex
`TkA08G045780`	`LXL04_017848`	`JCVI_TKOH_00338`	83.5	100.0 / 100.0	Review
`TkA08G046010`	`LXL04_017846`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Strict
`TkA08G046020`	`LXL04_017844`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Strict
`TkA08G046030`	`LXL04_017845`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Strict
`TkA08G046040`	`LXL04_017843`	`JCVI_TKOH_00338`	100.0	93.691 / 90.549	Strict
`TkA08G046250`	`LXL04_017840`	`JCVI_TKOH_00338`	99.8	100.0 / 100.0	Complex
`TkA08G046270`	`LXL04_017839`	`JCVI_TKOH_00338`	99.4	100.0 / 100.0	Strict
`TkA08G046470`	`LXL04_017836`	`JCVI_TKOH_00338`	100.0	100.0 / 20.404	Review
`TkA08G046480`	`LXL04_017836`	`JCVI_TKOH_00338`	99.2	100.0 / 48.687	Review
`TkA08G046590`	`LXL04_017834`	`JCVI_TKOH_00338`	90.2	97.826 / 80.247	Probable
`TkA08G046640`	`LXL04_017832`	`JCVI_TKOH_00338`	95.5	100.0 / 100.0	Strict
`TkA08G047240`	`LXL04_017827`	`JCVI_TKOH_00338`	57.8	67.857 / 30.405	Complex
`TkA08G047250`	`LXL04_017828`	`JCVI_TKOH_00338`	93.1	100.0 / 33.165	Complex
`TkA08G047390`	`LXL04_017827`	`JCVI_TKOH_00338`	66.5	82.353 / 30.676	Complex
`TkA08G047420`	`LXL04_017828`	`JCVI_TKOH_00338`	99.5	99.519 / 52.405	Review
`TkA08G047460`	`LXL04_017827`	`JCVI_TKOH_00338`	99.8	98.843 / 57.703	Review
`TkA08G047470`	`LXL04_017827`	`JCVI_TKOH_00338`	89.8	20.248 / 6.622	Complex
`TkA08G047740`	`LXL04_017825`	`JCVI_TKOH_00338`	100.0	100.0 / 96.842	Complex
`TkA08G047820`	`LXL04_017823`	`JCVI_TKOH_00338`	99.3	100.0 / 100.0	Strict
`TkA08G047830`	`LXL04_017822`	`JCVI_TKOH_00338`	97.6	100.0 / 100.0	Strict
`TkA08G047850`	`LXL04_017821`	`JCVI_TKOH_00338`	96.8	97.233 / 91.423	Strict
`TkA08G048130`	`LXL04_017820`	`JCVI_TKOH_00338`	99.5	100.0 / 100.0	Complex
`TkA08G048140`	`LXL04_017819`	`JCVI_TKOH_00338`	99.1	100.0 / 100.0	Strict
`TkA08G048280`	`LXL04_017818`	`JCVI_TKOH_00338`	100.0	100.0 / 88.136	Review
`TkA08G048640`	`LXL04_017817`	`JCVI_TKOH_00338`	97.9	100.0 / 100.0	Strict
`TkA08G048650`	`LXL04_017816`	`JCVI_TKOH_00338`	83.2	72.789 / 43.096	Complex
`TkA08G048680`	`LXL04_017815`	`JCVI_TKOH_00338`	94.9	95.964 / 59.322	Review
`TkA08G048710`	`LXL04_017814`	`JCVI_TKOH_00338`	99.2	95.411 / 57.081	Review
`TkA08G048770`	`LXL04_017810`	`JCVI_TKOH_00338`	81.9	96.861 / 50.0	Complex
`TkA08G048780`	`LXL04_017810`	`JCVI_TKOH_00338`	83.1	92.414 / 31.628	Complex
`TkA08G048810`	`LXL04_017812`	`JCVI_TKOH_00338`	98.1	69.281 / 72.109	Review
`TkA08G049000`	`LXL04_017806`	`JCVI_TKOH_00338`	53.8	100.0 / 11.538	Complex
`TkA08G049080`	`LXL04_017806`	`JCVI_TKOH_00338`	80.3	98.813 / 37.363	Review
`TkA08G049090`	`LXL04_017806`	`JCVI_TKOH_00338`	78.4	98.916 / 40.0	Complex
`TkA08G049630`	`LXL04_017804`	`JCVI_TKOH_00338`	99.2	100.0 / 100.0	Strict
`TkA08G049640`	`LXL04_017803`	`JCVI_TKOH_00338`	98.8	94.329 / 100.0	Strict
`TkA08G049650`	`LXL04_017802`	`JCVI_TKOH_00338`	99.6	100.0 / 100.0	Strict
`TkA08G049750`	`LXL04_017801`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Complex
`TkA08G050360`	`LXL04_017800`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Complex
`TkA08G050370`	`LXL04_017799`	`JCVI_TKOH_00338`	98.6	100.0 / 100.0	Strict
`TkA08G050410`	`LXL04_017798`	`JCVI_TKOH_00338`	86.0	100.0 / 100.0	Review
`TkA08G050540`	`LXL04_017794`	`JCVI_TKOH_00338`	99.5	98.529 / 99.505	Complex
`TkA08G050550`	`LXL04_017793`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Strict
`TkA08G050560`	`LXL04_017792`	`JCVI_TKOH_00338`	98.8	100.0 / 100.0	Strict
`TkA08G050620`	`LXL04_017791`	`JCVI_TKOH_00338`	98.5	47.518 / 32.683	Complex
`TkA08G050820`	`LXL04_017790`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Complex
`TkA08G051130`	`LXL04_017783`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Strict
`TkA08G051300`	`LXL04_017776`	`JCVI_TKOH_00338`	38.4	81.356 / 39.286	Complex
`TkA08G051310`	`LXL04_017781`	`JCVI_TKOH_00338`	90.2	99.324 / 47.305	Review
`TkA08G051600`	`LXL04_017776`	`JCVI_TKOH_00338`	99.7	100.0 / 100.0	Strict
`TkA08G051670`	`LXL04_017766`	`JCVI_TKOH_00338`	66.5	87.805 / 59.527	Complex
`TkA08G051820`	`LXL04_017767`	`JCVI_TKOH_00338`	91.6	100.0 / 100.0	Complex
`TkA08G052070`	`LXL04_017773`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Strict
`TkA08G052100`	`LXL04_017770`	`JCVI_TKOH_00338`	98.1	100.0 / 100.0	Strict
`TkA08G052130`	`LXL04_017769`	`JCVI_TKOH_00338`	97.3	100.0 / 71.498	Probable
`TkA08G052240`	`LXL04_017767`	`JCVI_TKOH_00338`	94.4	100.0 / 100.0	Complex
`TkA08G052270`	`LXL04_017766`	`JCVI_TKOH_00338`	95.7	100.0 / 100.0	Complex
`TkA08G052330`	`LXL04_017766`	`JCVI_TKOH_00338`	91.6	100.0 / 100.0	Complex
`TkA08G052360`	`LXL04_017765`	`JCVI_TKOH_00338`	98.9	100.0 / 100.0	Complex
`TkA08G052370`	`LXL04_017764`	`JCVI_TKOH_00338`	100.0	100.0 / 92.267	Complex
`TkA08G052380`	`LXL04_017763`	`JCVI_TKOH_00338`	98.4	100.0 / 94.574	Complex
`TkA08G052390`	`LXL04_017763`	`JCVI_TKOH_00338`	85.8	100.0 / 94.574	Complex
`TkA08G052500`	`LXL04_017760`	`JCVI_TKOH_00338`	97.1	100.0 / 70.439	Probable
`TkA08G052580`	`LXL04_017759`	`JCVI_TKOH_00338`	92.7	100.0 / 100.0	Probable
`TkA08G052600`	`LXL04_017758`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Complex
`TkA08G052980`	`LXL04_017751`	`JCVI_TKOH_00338`	97.8	100.0 / 100.0	Strict
`TkA08G053000`	`LXL04_017749`	`JCVI_TKOH_00338`	98.4	43.662 / 27.928	Review
`TkA08G053220`	`LXL04_017747`	`JCVI_TKOH_00338`	98.6	100.0 / 100.0	Strict
`TkA08G053230`	`LXL04_017745`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Complex
`TkA08G053270`	`LXL04_017744`	`JCVI_TKOH_00338`	97.8	98.596 / 77.981	Probable
`TkA08G053290`	`LXL04_017743`	`JCVI_TKOH_00338`	100.0	27.803 / 14.059	Review
`TkA08G053300`	`LXL04_017742`	`JCVI_TKOH_00338`	81.8	75.316 / 54.751	Review
`TkA08G053410`	`LXL04_017740`	`JCVI_TKOH_00338`	99.2	57.944 / 19.872	Complex
`TkA08G053450`	`LXL04_017737`	`JCVI_TKOH_00338`	99.3	100.0 / 100.0	Strict
`TkA08G053750`	`LXL04_017733`	`JCVI_TKOH_00338`	99.0	99.683 / 95.738	Strict
`TkA08G053790`	`LXL04_017732`	`JCVI_TKOH_00338`	99.9	100.0 / 100.0	Strict
`TkA08G053800`	`LXL04_017731`	`JCVI_TKOH_00338`	98.2	76.339 / 100.0	Complex
`TkA08G053870`	`LXL04_017728`	`JCVI_TKOH_00338`	99.0	94.064 / 67.541	Complex
`TkA08G053880`	`LXL04_017727`	`JCVI_TKOH_00338`	99.5	100.0 / 98.348	Strict
`TkA08G053890`	`LXL04_017726`	`JCVI_TKOH_00338`	92.2	92.157 / 93.377	Probable
`TkA08G054000`	`LXL04_017724`	`JCVI_TKOH_00338`	77.7	97.241 / 91.826	Review
`TkA08G054050`	`LXL04_017722`	`JCVI_TKOH_00338`	99.8	97.553 / 52.074	Review
`TkA08G054070`	`LXL04_017721`	`JCVI_TKOH_00338`	99.2	100.0 / 62.214	Complex
`TkA08G054080`	`LXL04_017720`	`JCVI_TKOH_00338`	100.0	98.82 / 39.692	Review
`TkA08G054130`	`LXL04_017718`	`JCVI_TKOH_00338`	96.1	100.0 / 33.373	Review
`TkA08G054180`	`LXL04_017717`	`JCVI_TKOH_00338`	98.8	38.71 / 18.026	Complex
`TkA08G054240`	`LXL04_017716`	`JCVI_TKOH_00338`	72.8	87.248 / 90.23	Complex
`TkA08G054290`	`LXL04_017713`	`JCVI_TKOH_00338`	99.2	58.796 / 58.796	Review
`TkA08G054380`	`LXL04_017711`	`JCVI_TKOH_00338`	97.7	100.0 / 100.0	Strict
`TkA08G054420`	`LXL04_017710`	`JCVI_TKOH_00338`	99.3	100.0 / 53.957	Review
`TkA08G054450`	`LXL04_017709`	`JCVI_TKOH_00338`	99.5	100.0 / 100.0	Strict
`TkA08G054460`	`LXL04_017708`	`JCVI_TKOH_00338`	100.0	100.0 / 100.0	Strict
`TkA08G054800`	`LXL04_017705`	`JCVI_TKOH_00338`	99.7	99.708 / 83.744	Strict