同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00240
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 113
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00240

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00240 Chr05 71553682-82903129 Chr04 104894729-116235532 mixed High 113 anchors
Chr05 71553682-82903129 Chr04 104894729-116235532 JCVI_TKOH_00240 · 113 gene pairs TkA05G289600 | LXL04_020693 | 98.4% | multi_source_to_OH1004 | Complex TkA05G290140 | LXL04_020686 | 98.8% | multi_source_to_OH1004 | Complex TkA05G290410 | LXL04_020685 | 94.7% | non_reciprocal_best_hit | Complex TkA05G291160 | LXL04_020685 | 99.8% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA05G291170 | LXL04_020686 | 98.3% | multi_source_to_OH1004 | Complex TkA05G291660 | LXL04_020693 | 99.0% | multi_source_to_OH1004 | Complex TkA05G296680 | LXL04_020708 | 99.4% | RBH_high_identity_coverage_synteny | Strict TkA05G296960 | LXL04_020709 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA05G297600 | LXL04_020710 | 99.6% | RBH_high_identity_coverage_synteny | Strict TkA05G297780 | LXL04_020711 | 100.0% | multi_source_to_OH1004 | Complex TkA05G297790 | LXL04_020712 | 93.5% | RBH_sequence_supported | Probable TkA05G297800 | LXL04_020713 | 91.4% | RBH_below_probable_coverage_or_synteny_threshold | Review
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00240 Chr05:71553682-82903129 Chr04:104894729-116235532 mixed 113 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 113 · 当前范围 1–113 · 页码 1/1

TkA05G289600 → LXL04_020693
98.4%
TkA05G290140 → LXL04_020686
98.8%
TkA05G290410 → LXL04_020685
94.7%
TkA05G291160 → LXL04_020685
99.8%
TkA05G291170 → LXL04_020686
98.3%
TkA05G291660 → LXL04_020693
99.0%
TkA05G296680 → LXL04_020708
99.4%
TkA05G296960 → LXL04_020709
100.0%
TkA05G297600 → LXL04_020710
99.6%
TkA05G297780 → LXL04_020711
100.0%
TkA05G297790 → LXL04_020712
93.5%
TkA05G297800 → LXL04_020713
91.4%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA05G289600LXL04_020693JCVI_TKOH_0024098.4100.0 / 100.0Complex
TkA05G290140LXL04_020686JCVI_TKOH_0024098.891.549 / 69.002Complex
TkA05G290410LXL04_020685JCVI_TKOH_0024094.7100.0 / 100.0Complex
TkA05G291160LXL04_020685JCVI_TKOH_0024099.8100.0 / 100.0待复核
TkA05G291170LXL04_020686JCVI_TKOH_0024098.393.023 / 76.433Complex
TkA05G291660LXL04_020693JCVI_TKOH_0024099.0100.0 / 100.0Complex
TkA05G296680LXL04_020708JCVI_TKOH_0024099.4100.0 / 100.0Strict
TkA05G296960LXL04_020709JCVI_TKOH_00240100.097.887 / 49.291待复核
TkA05G297600LXL04_020710JCVI_TKOH_0024099.6100.0 / 100.0Strict
TkA05G297780LXL04_020711JCVI_TKOH_00240100.0100.0 / 100.0Complex
TkA05G297790LXL04_020712JCVI_TKOH_0024093.5100.0 / 100.0Probable
TkA05G297800LXL04_020713JCVI_TKOH_0024091.4100.0 / 48.333待复核
TkA05G298180LXL04_020715JCVI_TKOH_0024083.520.412 / 100.0待复核
TkA05G298310LXL04_020715JCVI_TKOH_0024090.6100.0 / 32.215Complex
TkA05G298610LXL04_020720JCVI_TKOH_0024098.0100.0 / 61.111Complex
TkA05G298950LXL04_020725JCVI_TKOH_0024099.398.444 / 81.734Strict
TkA05G298960LXL04_020727JCVI_TKOH_0024089.999.533 / 94.007待复核
TkA05G299260LXL04_020728JCVI_TKOH_0024086.3100.0 / 100.0待复核
TkA05G299270LXL04_020729JCVI_TKOH_0024098.690.506 / 84.118Strict
TkA05G299670LXL04_020731JCVI_TKOH_0024099.1100.0 / 100.0待复核
TkA05G299800LXL04_020733JCVI_TKOH_0024098.590.644 / 100.0Strict
TkA05G300010LXL04_020735JCVI_TKOH_00240100.0100.0 / 100.0Strict
TkA05G300040LXL04_020738JCVI_TKOH_00240100.0100.0 / 100.0Strict
TkA05G300050LXL04_020739JCVI_TKOH_0024077.7100.0 / 100.0待复核
TkA05G300140LXL04_020740JCVI_TKOH_0024091.698.352 / 100.0Complex
TkA05G300680LXL04_020741JCVI_TKOH_0024094.099.738 / 78.556Complex
TkA05G300830LXL04_020744JCVI_TKOH_0024092.6100.0 / 100.0Probable
TkA05G300940LXL04_020745JCVI_TKOH_0024094.299.593 / 71.409Probable
TkA05G300950LXL04_020746JCVI_TKOH_00240100.0100.0 / 85.922Strict
TkA05G301990LXL04_020748JCVI_TKOH_0024092.097.139 / 93.286Probable
TkA05G302020LXL04_020749JCVI_TKOH_0024092.899.413 / 76.596Probable
TkA05G302030LXL04_020750JCVI_TKOH_0024099.893.607 / 71.057Probable
TkA05G302050LXL04_020751JCVI_TKOH_0024097.7100.0 / 100.0Strict
TkA05G302320LXL04_020752JCVI_TKOH_00240100.0100.0 / 100.0待复核
TkA05G303310LXL04_020762JCVI_TKOH_0024099.0100.0 / 100.0Strict
TkA05G304290LXL04_020774JCVI_TKOH_0024093.3100.0 / 100.0Probable
TkA05G305620LXL04_020778JCVI_TKOH_00240100.0100.0 / 100.0Complex
TkA05G305870LXL04_020779JCVI_TKOH_0024084.4100.0 / 100.0Complex
TkA05G305880LXL04_020781JCVI_TKOH_00240100.096.814 / 93.824待复核
TkA05G307470LXL04_020786JCVI_TKOH_0024096.758.738 / 32.44Complex
TkA05G307560LXL04_020786JCVI_TKOH_0024098.9100.0 / 100.0Complex
TkA05G307730LXL04_020793JCVI_TKOH_0024098.9100.0 / 100.0Strict
TkA05G308420LXL04_020809JCVI_TKOH_0024098.9100.0 / 100.0Complex
TkA05G309010LXL04_020802JCVI_TKOH_0024095.5100.0 / 97.5Strict
TkA05G309490LXL04_020794JCVI_TKOH_0024099.499.444 / 79.204Complex
TkA05G309510LXL04_020798JCVI_TKOH_0024099.051.02 / 26.385Complex
TkA05G309820LXL04_020794JCVI_TKOH_0024099.098.558 / 90.708Complex
TkA05G310260LXL04_020779JCVI_TKOH_0024094.0100.0 / 98.049Complex
TkA05G310290LXL04_020781JCVI_TKOH_0024099.596.814 / 93.824待复核
TkA05G311010LXL04_020786JCVI_TKOH_0024099.2100.0 / 100.0Complex
TkA05G311600LXL04_020807JCVI_TKOH_0024098.281.618 / 77.622Probable
TkA05G311750LXL04_020809JCVI_TKOH_0024096.2100.0 / 100.0Complex
TkA05G312570LXL04_020811JCVI_TKOH_00240100.0100.0 / 100.0Strict
TkA05G312730LXL04_020812JCVI_TKOH_0024094.8100.0 / 93.209Probable
TkA05G312960LXL04_020815JCVI_TKOH_0024087.2100.0 / 100.0待复核
TkA05G313380LXL04_020820JCVI_TKOH_0024096.7100.0 / 57.512待复核
TkA05G314120LXL04_020822JCVI_TKOH_0024099.699.909 / 88.71Complex
TkA05G314140LXL04_020822JCVI_TKOH_0024099.699.909 / 88.71Complex
TkA05G314320LXL04_020824JCVI_TKOH_0024099.4100.0 / 100.0待复核
TkA05G314440LXL04_020825JCVI_TKOH_0024099.8100.0 / 100.0Complex
TkA05G314700LXL04_020827JCVI_TKOH_0024097.8100.0 / 94.889Strict
TkA05G314710LXL04_020829JCVI_TKOH_0024098.9100.0 / 100.0Complex
TkA05G314850LXL04_020831JCVI_TKOH_0024060.999.65 / 99.758Complex
TkA05G314980LXL04_020834JCVI_TKOH_00240100.0100.0 / 54.217待复核
TkA05G315000LXL04_020843JCVI_TKOH_0024094.7100.0 / 41.728Complex
TkA05G315130LXL04_020838JCVI_TKOH_0024099.2100.0 / 89.189Strict
TkA05G315220LXL04_020841JCVI_TKOH_0024099.4100.0 / 66.122Complex
TkA05G315430LXL04_020843JCVI_TKOH_0024097.8100.0 / 88.642Strict
TkA05G315960LXL04_020846JCVI_TKOH_0024099.7100.0 / 48.818待复核
TkA05G316510LXL04_020848JCVI_TKOH_0024099.4100.0 / 97.892Complex
TkA05G317590LXL04_020850JCVI_TKOH_0024098.6100.0 / 100.0Complex
TkA05G317610LXL04_020850JCVI_TKOH_0024078.5100.0 / 100.0Complex
TkA05G318340LXL04_020855JCVI_TKOH_0024099.1100.0 / 100.0Strict
TkA05G318650LXL04_020857JCVI_TKOH_0024097.7100.0 / 100.0Strict
TkA05G318890LXL04_020860JCVI_TKOH_00240100.0100.0 / 100.0Complex
TkA05G318940LXL04_020861JCVI_TKOH_00240100.0100.0 / 100.0待复核
TkA05G319060LXL04_020863JCVI_TKOH_00240100.0100.0 / 100.0Complex
TkA05G322710LXL04_020876JCVI_TKOH_00240100.0100.0 / 100.0Complex
TkA05G323370LXL04_020877JCVI_TKOH_0024093.7100.0 / 99.097Probable
TkA05G323550LXL04_020878JCVI_TKOH_0024099.899.816 / 99.816Complex
TkA05G323600LXL04_020879JCVI_TKOH_0024099.5100.0 / 100.0Complex
TkA05G323610LXL04_020880JCVI_TKOH_0024083.5100.0 / 100.0Complex
TkA05G324060LXL04_020878JCVI_TKOH_0024099.499.816 / 99.816Complex
TkA05G324750LXL04_020879JCVI_TKOH_0024097.5100.0 / 100.0Complex
TkA05G324770LXL04_020880JCVI_TKOH_0024084.6100.0 / 100.0Complex
TkA05G325490LXL04_020882JCVI_TKOH_0024093.2100.0 / 100.0Complex
TkA05G325720LXL04_020883JCVI_TKOH_0024063.9100.0 / 100.0Complex
TkA05G325770LXL04_020884JCVI_TKOH_0024093.5100.0 / 55.703Complex
TkA05G326300LXL04_020887JCVI_TKOH_00240100.0100.0 / 100.0Strict
TkA05G326760LXL04_020890JCVI_TKOH_00240100.0100.0 / 96.685待复核
TkA05G326860LXL04_020892JCVI_TKOH_0024099.6100.0 / 48.205待复核
TkA05G327050LXL04_020894JCVI_TKOH_0024099.7100.0 / 100.0Complex
TkA05G329470LXL04_020903JCVI_TKOH_0024098.252.866 / 16.355Complex
TkA05G331440LXL04_020906JCVI_TKOH_0024099.1100.0 / 100.0Strict
TkA05G331970LXL04_020908JCVI_TKOH_0024072.737.692 / 96.117待复核
TkA05G331980LXL04_020909JCVI_TKOH_0024089.8100.0 / 72.571待复核
TkA05G332600LXL04_020910JCVI_TKOH_0024096.0100.0 / 100.0Strict
TkA05G332910LXL04_020914JCVI_TKOH_0024096.797.422 / 59.815待复核
TkA05G333000LXL04_020917JCVI_TKOH_0024095.086.022 / 80.987Strict
TkA05G333090LXL04_020918JCVI_TKOH_0024099.6100.0 / 100.0Strict
TkA05G333180LXL04_020919JCVI_TKOH_0024092.7100.0 / 100.0待复核
TkA05G333510LXL04_020923JCVI_TKOH_0024074.570.0 / 86.096Complex
TkA05G333690LXL04_020922JCVI_TKOH_0024099.692.164 / 68.994Complex
TkA05G333920LXL04_020951JCVI_TKOH_0024097.198.945 / 66.132Complex
TkA05G333950LXL04_020949JCVI_TKOH_0024099.299.742 / 50.13待复核
TkA05G333970LXL04_020948JCVI_TKOH_0024094.1100.0 / 100.0Probable
TkA05G334270LXL04_020947JCVI_TKOH_0024097.599.39 / 99.39待复核
TkA05G334520LXL04_020944JCVI_TKOH_0024099.8100.0 / 100.0Strict
TkA05G334570LXL04_020943JCVI_TKOH_0024092.3100.0 / 100.0Probable
TkA05G334800LXL04_020942JCVI_TKOH_0024099.2100.0 / 100.0Complex
TkA05G334850LXL04_020941JCVI_TKOH_0024097.894.578 / 100.0待复核
TkA05G334860LXL04_020940JCVI_TKOH_0024099.7100.0 / 100.0Complex
TkA05G335510LXL04_020936JCVI_TKOH_00240100.0100.0 / 100.0Complex