Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00098

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 340

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00098

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00098 Chr02 147743073-157773519 Chr03 679290-10389123 mixed High 140 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00098`	Chr02:147743073-157773519	Chr03:679290-10389123	mixed	340	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 340 · Showing 201–340 · Page 2/2

Previous Download All Anchors TSV

TkA02G592370 → LXL04_012022

96.5%

TkA02G592420 → LXL04_012021

98.3%

TkA02G592440 → LXL04_012019

99.5%

TkA02G592450 → LXL04_012018

100.0%

TkA02G592560 → LXL04_012017

100.0%

TkA02G592720 → LXL04_012015

100.0%

TkA02G592880 → LXL04_012011

99.8%

TkA02G592990 → LXL04_012009

99.1%

TkA02G593320 → LXL04_012006

99.3%

TkA02G593470 → LXL04_012005

99.6%

TkA02G593840 → LXL04_012006

98.5%

TkA02G593850 → LXL04_012005

100.0%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA02G592370`	`LXL04_012022`	`JCVI_TKOH_00098`	96.5	99.78 / 73.726	Probable
`TkA02G592420`	`LXL04_012021`	`JCVI_TKOH_00098`	98.3	100.0 / 84.967	Strict
`TkA02G592440`	`LXL04_012019`	`JCVI_TKOH_00098`	99.5	100.0 / 71.429	Probable
`TkA02G592450`	`LXL04_012018`	`JCVI_TKOH_00098`	100.0	96.853 / 83.166	Strict
`TkA02G592560`	`LXL04_012017`	`JCVI_TKOH_00098`	100.0	84.211 / 41.983	Complex
`TkA02G592720`	`LXL04_012015`	`JCVI_TKOH_00098`	100.0	92.517 / 91.892	Complex
`TkA02G592880`	`LXL04_012011`	`JCVI_TKOH_00098`	99.8	100.0 / 94.737	Strict
`TkA02G592990`	`LXL04_012009`	`JCVI_TKOH_00098`	99.1	100.0 / 100.0	Strict
`TkA02G593320`	`LXL04_012006`	`JCVI_TKOH_00098`	99.3	100.0 / 100.0	Review
`TkA02G593470`	`LXL04_012005`	`JCVI_TKOH_00098`	99.6	95.417 / 94.628	Complex
`TkA02G593840`	`LXL04_012006`	`JCVI_TKOH_00098`	98.5	96.875 / 76.629	Complex
`TkA02G593850`	`LXL04_012005`	`JCVI_TKOH_00098`	100.0	100.0 / 86.364	Complex
`TkA02G593970`	`LXL04_012003`	`JCVI_TKOH_00098`	97.3	100.0 / 100.0	Strict
`TkA02G593980`	`LXL04_012001`	`JCVI_TKOH_00098`	98.9	83.7 / 86.364	Strict
`TkA02G594040`	`LXL04_012000`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Strict
`TkA02G594100`	`LXL04_011999`	`JCVI_TKOH_00098`	99.6	95.378 / 56.122	Review
`TkA02G594110`	`LXL04_011999`	`JCVI_TKOH_00098`	99.4	95.594 / 41.002	Review
`TkA02G594120`	`LXL04_011998`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Complex
`TkA02G594160`	`LXL04_011997`	`JCVI_TKOH_00098`	58.1	100.0 / 100.0	Complex
`TkA02G594750`	`LXL04_011997`	`JCVI_TKOH_00098`	72.0	98.842 / 68.565	Complex
`TkA02G594810`	`LXL04_011996`	`JCVI_TKOH_00098`	100.0	100.0 / 81.295	Complex
`TkA02G594880`	`LXL04_011997`	`JCVI_TKOH_00098`	93.7	100.0 / 60.127	Complex
`TkA02G594890`	`LXL04_011994`	`JCVI_TKOH_00098`	95.1	100.0 / 89.974	Complex
`TkA02G595010`	`LXL04_011989`	`JCVI_TKOH_00098`	85.6	100.0 / 78.03	Complex
`TkA02G595150`	`LXL04_011986`	`JCVI_TKOH_00098`	98.5	100.0 / 100.0	Complex
`TkA02G595470`	`LXL04_011984`	`JCVI_TKOH_00098`	99.4	100.0 / 100.0	Complex
`TkA02G595480`	`LXL04_011983`	`JCVI_TKOH_00098`	99.0	89.61 / 89.224	Review
`TkA02G595520`	`LXL04_011982`	`JCVI_TKOH_00098`	99.3	100.0 / 100.0	Strict
`TkA02G595540`	`LXL04_011981`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Strict
`TkA02G595710`	`LXL04_011980`	`JCVI_TKOH_00098`	99.0	98.403 / 89.005	Strict
`TkA02G595970`	`LXL04_011975`	`JCVI_TKOH_00098`	96.4	100.0 / 93.252	Complex
`TkA02G596220`	`LXL04_011974`	`JCVI_TKOH_00098`	97.6	42.64 / 59.155	Complex
`TkA02G596240`	`LXL04_011972`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Review
`TkA02G596560`	`LXL04_011969`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Review
`TkA02G597270`	`LXL04_011966`	`JCVI_TKOH_00098`	99.1	100.0 / 79.298	Complex
`TkA02G597280`	`LXL04_011965`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Complex
`TkA02G597300`	`LXL04_011964`	`JCVI_TKOH_00098`	99.6	100.0 / 100.0	Complex
`TkA02G597570`	`LXL04_011961`	`JCVI_TKOH_00098`	89.0	100.0 / 19.931	Complex
`TkA02G597670`	`LXL04_011960`	`JCVI_TKOH_00098`	83.0	100.0 / 90.099	Complex
`TkA02G597710`	`LXL04_011959`	`JCVI_TKOH_00098`	97.8	77.143 / 97.826	Probable
`TkA02G597810`	`LXL04_011960`	`JCVI_TKOH_00098`	70.6	100.0 / 57.426	Complex
`TkA02G597830`	`LXL04_011958`	`JCVI_TKOH_00098`	100.0	54.397 / 31.629	Complex
`TkA02G597990`	`LXL04_011960`	`JCVI_TKOH_00098`	63.9	36.0 / 49.505	Complex
`TkA02G598370`	`LXL04_011997`	`JCVI_TKOH_00098`	93.0	100.0 / 60.127	Complex
`TkA02G598380`	`LXL04_011994`	`JCVI_TKOH_00098`	95.1	100.0 / 89.974	Complex
`TkA02G598400`	`LXL04_011989`	`JCVI_TKOH_00098`	97.7	92.827 / 100.0	Complex
`TkA02G598670`	`LXL04_011986`	`JCVI_TKOH_00098`	98.9	100.0 / 100.0	Complex
`TkA02G598890`	`LXL04_011984`	`JCVI_TKOH_00098`	100.0	90.196 / 41.194	Review
`TkA02G598900`	`LXL04_011983`	`JCVI_TKOH_00098`	98.6	92.453 / 63.362	Complex
`TkA02G599630`	`LXL04_011976`	`JCVI_TKOH_00098`	99.1	100.0 / 98.291	Strict
`TkA02G599640`	`LXL04_011975`	`JCVI_TKOH_00098`	92.1	100.0 / 69.939	Complex
`TkA02G599900`	`LXL04_011972`	`JCVI_TKOH_00098`	99.0	100.0 / 100.0	Review
`TkA02G600120`	`LXL04_011969`	`JCVI_TKOH_00098`	99.2	93.75 / 98.361	Review
`TkA02G600360`	`LXL04_011966`	`JCVI_TKOH_00098`	99.6	100.0 / 79.298	Complex
`TkA02G600370`	`LXL04_011965`	`JCVI_TKOH_00098`	99.2	100.0 / 100.0	Complex
`TkA02G600390`	`LXL04_011964`	`JCVI_TKOH_00098`	98.1	100.0 / 100.0	Complex
`TkA02G600430`	`LXL04_011962`	`JCVI_TKOH_00098`	78.5	100.0 / 83.178	Review
`TkA02G600530`	`LXL04_011948`	`JCVI_TKOH_00098`	79.7	99.301 / 96.629	Complex
`TkA02G600540`	`LXL04_011947`	`JCVI_TKOH_00098`	98.1	44.068 / 24.528	Complex
`TkA02G600560`	`LXL04_011946`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Review
`TkA02G600950`	`LXL04_011942`	`JCVI_TKOH_00098`	51.1	93.939 / 63.772	Review
`TkA02G602010`	`LXL04_011936`	`JCVI_TKOH_00098`	97.8	100.0 / 100.0	Complex
`TkA02G602420`	`LXL04_011935`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Complex
`TkA02G602620`	`LXL04_011932`	`JCVI_TKOH_00098`	97.3	100.0 / 100.0	Complex
`TkA02G602800`	`LXL04_011930`	`JCVI_TKOH_00098`	100.0	95.885 / 88.931	Strict
`TkA02G603240`	`LXL04_011929`	`JCVI_TKOH_00098`	97.1	100.0 / 100.0	Complex
`TkA02G603320`	`LXL04_011927`	`JCVI_TKOH_00098`	100.0	99.383 / 62.646	Review
`TkA02G603440`	`LXL04_011926`	`JCVI_TKOH_00098`	100.0	100.0 / 95.026	Complex
`TkA02G603490`	`LXL04_011925`	`JCVI_TKOH_00098`	98.8	100.0 / 100.0	Review
`TkA02G603690`	`LXL04_011924`	`JCVI_TKOH_00098`	95.1	100.0 / 53.731	Review
`TkA02G603710`	`LXL04_011922`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Strict
`TkA02G603720`	`LXL04_011921`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Complex
`TkA02G603880`	`LXL04_011918`	`JCVI_TKOH_00098`	97.5	100.0 / 100.0	Complex
`TkA02G603910`	`LXL04_011917`	`JCVI_TKOH_00098`	98.5	98.23 / 38.101	Review
`TkA02G604010`	`LXL04_011927`	`JCVI_TKOH_00098`	100.0	99.383 / 62.646	Complex
`TkA02G604150`	`LXL04_011926`	`JCVI_TKOH_00098`	100.0	100.0 / 95.026	Complex
`TkA02G604200`	`LXL04_011925`	`JCVI_TKOH_00098`	98.8	100.0 / 100.0	Complex
`TkA02G604270`	`LXL04_011924`	`JCVI_TKOH_00098`	98.3	100.0 / 53.731	Review
`TkA02G604320`	`LXL04_011921`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Complex
`TkA02G604370`	`LXL04_011918`	`JCVI_TKOH_00098`	97.9	100.0 / 100.0	Complex
`TkA02G604410`	`LXL04_011917`	`JCVI_TKOH_00098`	98.5	98.23 / 38.101	Review
`TkA02G604450`	`LXL04_011914`	`JCVI_TKOH_00098`	99.7	100.0 / 73.978	Probable
`TkA02G604470`	`LXL04_011913`	`JCVI_TKOH_00098`	96.9	100.0 / 94.792	Strict
`TkA02G604510`	`LXL04_011912`	`JCVI_TKOH_00098`	96.7	100.0 / 100.0	Strict
`TkA02G604780`	`LXL04_011910`	`JCVI_TKOH_00098`	90.9	100.0 / 95.156	Complex
`TkA02G604810`	`LXL04_011909`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Review
`TkA02G604850`	`LXL04_011908`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Strict
`TkA02G604860`	`LXL04_011907`	`JCVI_TKOH_00098`	96.3	100.0 / 100.0	Strict
`TkA02G604900`	`LXL04_011906`	`JCVI_TKOH_00098`	98.4	100.0 / 100.0	Strict
`TkA02G604910`	`LXL04_011905`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Strict
`TkA02G604980`	`LXL04_011902`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Complex
`TkA02G605060`	`LXL04_011900`	`JCVI_TKOH_00098`	98.3	100.0 / 100.0	Strict
`TkA02G605250`	`LXL04_011898`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Strict
`TkA02G605260`	`LXL04_011897`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Review
`TkA02G605270`	`LXL04_011896`	`JCVI_TKOH_00098`	70.1	74.038 / 21.447	Complex
`TkA02G605350`	`LXL04_011896`	`JCVI_TKOH_00098`	62.5	60.0 / 10.767	Complex
`TkA02G605360`	`LXL04_011896`	`JCVI_TKOH_00098`	77.0	99.398 / 7.106	Complex
`TkA02G605370`	`LXL04_011891`	`JCVI_TKOH_00098`	94.1	100.0 / 100.0	Complex
`TkA02G605450`	`LXL04_011890`	`JCVI_TKOH_00098`	99.6	100.0 / 100.0	Complex
`TkA02G605490`	`LXL04_011889`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Complex
`TkA02G605840`	`LXL04_011885`	`JCVI_TKOH_00098`	95.3	100.0 / 100.0	Complex
`TkA02G605920`	`LXL04_011884`	`JCVI_TKOH_00098`	100.0	100.0 / 90.937	Complex
`TkA02G605930`	`LXL04_011883`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Complex
`TkA02G606030`	`LXL04_011880`	`JCVI_TKOH_00098`	91.7	92.952 / 86.142	Complex
`TkA02G606040`	`LXL04_011879`	`JCVI_TKOH_00098`	99.2	79.012 / 100.0	Complex
`TkA02G606210`	`LXL04_011873`	`JCVI_TKOH_00098`	82.2	100.0 / 100.0	Review
`TkA02G606220`	`LXL04_011872`	`JCVI_TKOH_00098`	98.0	98.02 / 39.6	Review
`TkA02G606500`	`LXL04_011870`	`JCVI_TKOH_00098`	99.4	100.0 / 82.343	Strict
`TkA02G606580`	`LXL04_011869`	`JCVI_TKOH_00098`	99.0	51.206 / 19.67	Review
`TkA02G606820`	`LXL04_011868`	`JCVI_TKOH_00098`	100.0	100.0 / 87.5	Strict
`TkA02G606910`	`LXL04_011867`	`JCVI_TKOH_00098`	84.3	100.0 / 99.145	Review
`TkA02G606980`	`LXL04_011864`	`JCVI_TKOH_00098`	98.3	91.538 / 90.494	Strict
`TkA02G607070`	`LXL04_011861`	`JCVI_TKOH_00098`	99.0	96.42 / 100.0	Complex
`TkA02G607480`	`LXL04_011860`	`JCVI_TKOH_00098`	100.0	95.455 / 100.0	Strict
`TkA02G607490`	`LXL04_011859`	`JCVI_TKOH_00098`	99.1	100.0 / 100.0	Strict
`TkA02G607700`	`LXL04_011856`	`JCVI_TKOH_00098`	98.5	100.0 / 100.0	Strict
`TkA02G607780`	`LXL04_011855`	`JCVI_TKOH_00098`	98.0	100.0 / 100.0	Strict
`TkA02G607900`	`LXL04_011854`	`JCVI_TKOH_00098`	99.9	99.513 / 84.099	Strict
`TkA02G607960`	`LXL04_011853`	`JCVI_TKOH_00098`	98.2	100.0 / 100.0	Strict
`TkA02G607970`	`LXL04_011852`	`JCVI_TKOH_00098`	100.0	100.0 / 96.172	Complex
`TkA02G609080`	`LXL04_011847`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Strict
`TkA02G609110`	`LXL04_011845`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Strict
`TkA02G609130`	`LXL04_011844`	`JCVI_TKOH_00098`	87.0	96.29 / 36.651	Complex
`TkA02G609420`	`LXL04_011839`	`JCVI_TKOH_00098`	99.6	100.0 / 100.0	Strict
`TkA02G609430`	`LXL04_011838`	`JCVI_TKOH_00098`	99.5	100.0 / 100.0	Strict
`TkA02G609470`	`LXL04_011835`	`JCVI_TKOH_00098`	99.8	100.0 / 100.0	Complex
`TkA02G609480`	`LXL04_011833`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Strict
`TkA02G609630`	`LXL04_011832`	`JCVI_TKOH_00098`	100.0	100.0 / 54.812	Review
`TkA02G609660`	`LXL04_011831`	`JCVI_TKOH_00098`	98.9	99.883 / 93.443	Complex
`TkA02G609710`	`LXL04_011830`	`JCVI_TKOH_00098`	90.9	100.0 / 100.0	Probable
`TkA02G610290`	`LXL04_011823`	`JCVI_TKOH_00098`	99.7	100.0 / 99.869	Strict
`TkA02G610340`	`LXL04_011822`	`JCVI_TKOH_00098`	100.0	97.436 / 92.683	Complex
`TkA02G610360`	`LXL04_011821`	`JCVI_TKOH_00098`	99.7	98.267 / 100.0	Strict
`TkA02G611100`	`LXL04_011806`	`JCVI_TKOH_00098`	97.5	77.948 / 58.049	Review
`TkA02G611160`	`LXL04_011808`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Strict
`TkA02G611250`	`LXL04_011809`	`JCVI_TKOH_00098`	90.5	99.057 / 52.764	Review
`TkA02G611320`	`LXL04_011812`	`JCVI_TKOH_00098`	99.5	100.0 / 100.0	Complex
`TkA02G611560`	`LXL04_011813`	`JCVI_TKOH_00098`	97.4	26.351 / 3.645	Complex
`TkA02G611580`	`LXL04_011814`	`JCVI_TKOH_00098`	100.0	100.0 / 100.0	Strict
`TkA02G611640`	`LXL04_011815`	`JCVI_TKOH_00098`	94.3	100.0 / 93.764	Probable