同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00259
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 78
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00259

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00259 Chr06 24937-2511235 Chr05 127019195-129621829 mixed High 78 anchors
Chr06 24937-2511235 Chr05 127019195-129621829 JCVI_TKOH_00259 · 78 gene pairs TkA06G000190 | LXL04_026612 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA06G000600 | LXL04_026611 | 96.5% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA06G000630 | LXL04_026610 | 99.7% | sequence_supported_annotation_or_model_conflict | Review TkA06G000730 | LXL04_026609 | 98.2% | multi_source_to_OH1004 | Complex TkA06G000850 | LXL04_026608 | 94.6% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA06G000860 | LXL04_026607 | 54.1% | non_reciprocal_best_hit | Complex TkA06G000930 | LXL04_026606 | 96.3% | RBH_high_identity_coverage_synteny | Strict TkA06G000950 | LXL04_026604 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA06G001020 | LXL04_026602 | 99.9% | RBH_high_identity_coverage_synteny | Strict TkA06G001030 | LXL04_026601 | 99.1% | RBH_high_identity_coverage_synteny | Strict TkA06G001710 | LXL04_026599 | 99.8% | RBH_high_identity_coverage_synteny | Strict TkA06G002700 | LXL04_026587 | 98.7% | sequence_supported_annotation_or_model_conflict | Review
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00259 Chr06:24937-2511235 Chr05:127019195-129621829 mixed 78 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 78 · 当前范围 1–78 · 页码 1/1

TkA06G000190 → LXL04_026612
100.0%
TkA06G000600 → LXL04_026611
96.5%
TkA06G000630 → LXL04_026610
99.7%
TkA06G000730 → LXL04_026609
98.2%
TkA06G000850 → LXL04_026608
94.6%
TkA06G000860 → LXL04_026607
54.1%
TkA06G000930 → LXL04_026606
96.3%
TkA06G000950 → LXL04_026604
100.0%
TkA06G001020 → LXL04_026602
99.9%
TkA06G001030 → LXL04_026601
99.1%
TkA06G001710 → LXL04_026599
99.8%
TkA06G002700 → LXL04_026587
98.7%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA06G000190LXL04_026612JCVI_TKOH_00259100.095.614 / 42.578待复核
TkA06G000600LXL04_026611JCVI_TKOH_0025996.5100.0 / 100.0待复核
TkA06G000630LXL04_026610JCVI_TKOH_0025999.7100.0 / 57.958待复核
TkA06G000730LXL04_026609JCVI_TKOH_0025998.2100.0 / 100.0Complex
TkA06G000850LXL04_026608JCVI_TKOH_0025994.6100.0 / 58.824待复核
TkA06G000860LXL04_026607JCVI_TKOH_0025954.196.0 / 17.918Complex
TkA06G000930LXL04_026606JCVI_TKOH_0025996.3100.0 / 100.0Strict
TkA06G000950LXL04_026604JCVI_TKOH_00259100.088.038 / 82.143Strict
TkA06G001020LXL04_026602JCVI_TKOH_0025999.9100.0 / 100.0Strict
TkA06G001030LXL04_026601JCVI_TKOH_0025999.1100.0 / 100.0Strict
TkA06G001710LXL04_026599JCVI_TKOH_0025999.8100.0 / 100.0Strict
TkA06G002700LXL04_026587JCVI_TKOH_0025998.7100.0 / 95.652待复核
TkA06G002730LXL04_026587JCVI_TKOH_0025999.4100.0 / 95.652待复核
TkA06G003160LXL04_026588JCVI_TKOH_0025974.594.444 / 81.452Complex
TkA06G003270LXL04_026583JCVI_TKOH_0025998.3100.0 / 100.0Strict
TkA06G003300LXL04_026582JCVI_TKOH_0025999.3100.0 / 100.0Complex
TkA06G003680LXL04_026580JCVI_TKOH_0025999.0100.0 / 100.0Strict
TkA06G003770LXL04_026579JCVI_TKOH_0025997.483.212 / 88.716待复核
TkA06G003850LXL04_026577JCVI_TKOH_0025995.3100.0 / 100.0Strict
TkA06G004060LXL04_026576JCVI_TKOH_00259100.0100.0 / 83.817Strict
TkA06G004300LXL04_026573JCVI_TKOH_00259100.0100.0 / 100.0Strict
TkA06G004410LXL04_026571JCVI_TKOH_00259100.0100.0 / 100.0Strict
TkA06G004480LXL04_026568JCVI_TKOH_0025988.8100.0 / 100.0Complex
TkA06G004570LXL04_026565JCVI_TKOH_0025969.692.0 / 69.851待复核
TkA06G004630LXL04_026563JCVI_TKOH_0025999.695.222 / 100.0Complex
TkA06G004720LXL04_026560JCVI_TKOH_0025999.198.636 / 76.95Complex
TkA06G004920LXL04_026556JCVI_TKOH_0025999.6100.0 / 99.804Complex
TkA06G004970LXL04_026556JCVI_TKOH_0025962.886.653 / 82.711Complex
TkA06G005020LXL04_026554JCVI_TKOH_0025980.799.485 / 98.5Complex
TkA06G005060LXL04_026554JCVI_TKOH_00259100.0100.0 / 100.0Complex
TkA06G005400LXL04_026549JCVI_TKOH_0025960.8100.0 / 100.0Complex
TkA06G005680LXL04_026548JCVI_TKOH_0025997.8100.0 / 100.0Complex
TkA06G005950LXL04_026546JCVI_TKOH_0025999.895.682 / 97.229Strict
TkA06G006180LXL04_026545JCVI_TKOH_0025994.897.306 / 12.399Complex
TkA06G006310LXL04_026543JCVI_TKOH_00259100.098.913 / 68.012待复核
TkA06G006320LXL04_026542JCVI_TKOH_0025999.695.714 / 66.667待复核
TkA06G006390LXL04_026538JCVI_TKOH_0025990.697.71 / 48.462Complex
TkA06G006440LXL04_026537JCVI_TKOH_0025994.483.618 / 50.913待复核
TkA06G006460LXL04_026535JCVI_TKOH_0025999.795.484 / 43.086待复核
TkA06G006540LXL04_026532JCVI_TKOH_0025993.381.395 / 52.041待复核
TkA06G006570LXL04_026530JCVI_TKOH_0025998.899.609 / 59.155待复核
TkA06G006580LXL04_026530JCVI_TKOH_0025997.8100.0 / 32.16待复核
TkA06G006590LXL04_026529JCVI_TKOH_00259100.0100.0 / 100.0Strict
TkA06G006600LXL04_026528JCVI_TKOH_00259100.0100.0 / 100.0Complex
TkA06G006610LXL04_026527JCVI_TKOH_0025999.499.096 / 91.899Strict
TkA06G006660LXL04_026524JCVI_TKOH_0025999.6100.0 / 100.0Complex
TkA06G006720LXL04_026523JCVI_TKOH_0025981.3100.0 / 100.0Complex
TkA06G006980LXL04_026521JCVI_TKOH_0025985.9100.0 / 100.0待复核
TkA06G007000LXL04_026520JCVI_TKOH_00259100.081.452 / 37.269待复核
TkA06G007010LXL04_026519JCVI_TKOH_0025992.3100.0 / 100.0待复核
TkA06G007060LXL04_026517JCVI_TKOH_00259100.0100.0 / 100.0Complex
TkA06G007510LXL04_026515JCVI_TKOH_0025999.6100.0 / 100.0Strict
TkA06G007520LXL04_026514JCVI_TKOH_0025978.8100.0 / 83.019Complex
TkA06G007650LXL04_026510JCVI_TKOH_0025985.9100.0 / 31.444Complex
TkA06G007670LXL04_026510JCVI_TKOH_0025998.975.61 / 17.002Complex
TkA06G007740LXL04_026508JCVI_TKOH_0025999.5100.0 / 100.0Strict
TkA06G007760LXL04_026507JCVI_TKOH_0025999.7100.0 / 100.0待复核
TkA06G007840LXL04_026506JCVI_TKOH_0025996.699.659 / 58.635待复核
TkA06G008020LXL04_026505JCVI_TKOH_0025999.6100.0 / 100.0Strict
TkA06G008030LXL04_026504JCVI_TKOH_0025999.5100.0 / 87.373Strict
TkA06G008600LXL04_026500JCVI_TKOH_0025999.488.722 / 74.526Probable
TkA06G008610LXL04_026499JCVI_TKOH_0025987.096.013 / 38.182待复核
TkA06G008620LXL04_026499JCVI_TKOH_0025999.595.631 / 23.879待复核
TkA06G008660LXL04_026498JCVI_TKOH_0025999.499.678 / 99.678Strict
TkA06G008670LXL04_026497JCVI_TKOH_00259100.0100.0 / 100.0Strict
TkA06G008720LXL04_026496JCVI_TKOH_00259100.0100.0 / 100.0Strict
TkA06G008760LXL04_026495JCVI_TKOH_0025999.8100.0 / 100.0Complex
TkA06G008810LXL04_026495JCVI_TKOH_0025976.6100.0 / 63.68Complex
TkA06G008820LXL04_026494JCVI_TKOH_00259100.0100.0 / 100.0Strict
TkA06G008840LXL04_026493JCVI_TKOH_0025992.965.608 / 44.427Complex
TkA06G008920LXL04_026493JCVI_TKOH_0025999.897.133 / 43.969待复核
TkA06G008950LXL04_026492JCVI_TKOH_0025999.7100.0 / 100.0Strict
TkA06G009030LXL04_026490JCVI_TKOH_0025988.5100.0 / 100.0Complex
TkA06G009340LXL04_026488JCVI_TKOH_0025994.7100.0 / 100.0Probable
TkA06G009670LXL04_026484JCVI_TKOH_0025999.2100.0 / 100.0Strict
TkA06G009690LXL04_026483JCVI_TKOH_00259100.085.47 / 97.087Strict
TkA06G009730LXL04_026482JCVI_TKOH_0025999.6100.0 / 100.0Strict
TkA06G009740LXL04_026481JCVI_TKOH_0025999.8100.0 / 100.0Strict