同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00030
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 79
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00030

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00030 Chr01 109936447-112346394 Chr01 44348191-46054694 mixed High 79 anchors
Chr01 109936447-112346394 Chr01 44348191-46054694 JCVI_TKOH_00030 · 79 gene pairs TkA01G440660 | LXL04_002229 | 99.6% | RBH_high_identity_coverage_synteny | Strict TkA01G440670 | LXL04_002230 | 100.0% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA01G440770 | LXL04_002231 | 99.4% | RBH_high_identity_coverage_synteny | Strict TkA01G440800 | LXL04_002232 | 96.4% | multi_source_to_OH1004 | Complex TkA01G440850 | LXL04_002234 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA01G440920 | LXL04_002235 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA01G440980 | LXL04_002237 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA01G440990 | LXL04_002238 | 100.0% | multi_source_to_OH1004 | Complex TkA01G441000 | LXL04_002239 | 99.4% | sequence_supported_annotation_or_model_conflict | Review TkA01G441070 | LXL04_002241 | 74.0% | multi_source_to_OH1004 | Complex TkA01G441100 | LXL04_002242 | 91.7% | non_reciprocal_best_hit | Complex TkA01G441110 | LXL04_002243 | 100.0% | non_reciprocal_best_hit | Complex
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00030 Chr01:109936447-112346394 Chr01:44348191-46054694 mixed 79 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 79 · 当前范围 1–79 · 页码 1/1

TkA01G440660 → LXL04_002229
99.6%
TkA01G440670 → LXL04_002230
100.0%
TkA01G440770 → LXL04_002231
99.4%
TkA01G440800 → LXL04_002232
96.4%
TkA01G440850 → LXL04_002234
100.0%
TkA01G440920 → LXL04_002235
100.0%
TkA01G440980 → LXL04_002237
100.0%
TkA01G440990 → LXL04_002238
100.0%
TkA01G441000 → LXL04_002239
99.4%
TkA01G441070 → LXL04_002241
74.0%
TkA01G441100 → LXL04_002242
91.7%
TkA01G441110 → LXL04_002243
100.0%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA01G440660LXL04_002229JCVI_TKOH_0003099.699.627 / 97.445Strict
TkA01G440670LXL04_002230JCVI_TKOH_00030100.0100.0 / 100.0待复核
TkA01G440770LXL04_002231JCVI_TKOH_0003099.492.368 / 82.517Strict
TkA01G440800LXL04_002232JCVI_TKOH_0003096.494.186 / 92.798Complex
TkA01G440850LXL04_002234JCVI_TKOH_00030100.0100.0 / 100.0Strict
TkA01G440920LXL04_002235JCVI_TKOH_00030100.0100.0 / 100.0Strict
TkA01G440980LXL04_002237JCVI_TKOH_00030100.099.194 / 53.017待复核
TkA01G440990LXL04_002238JCVI_TKOH_00030100.099.292 / 72.461Complex
TkA01G441000LXL04_002239JCVI_TKOH_0003099.496.471 / 21.607待复核
TkA01G441070LXL04_002241JCVI_TKOH_0003074.0100.0 / 100.0Complex
TkA01G441100LXL04_002242JCVI_TKOH_0003091.792.308 / 32.636Complex
TkA01G441110LXL04_002243JCVI_TKOH_00030100.0100.0 / 70.787Complex
TkA01G441120LXL04_002244JCVI_TKOH_0003080.673.134 / 25.258Complex
TkA01G441130LXL04_002245JCVI_TKOH_0003091.893.388 / 64.474Complex
TkA01G441140LXL04_002246JCVI_TKOH_0003099.8100.0 / 100.0待复核
TkA01G441170LXL04_002247JCVI_TKOH_00030100.0100.0 / 100.0Complex
TkA01G441200LXL04_002248JCVI_TKOH_00030100.0100.0 / 100.0Strict
TkA01G441280LXL04_002250JCVI_TKOH_0003071.655.581 / 38.095Complex
TkA01G441340LXL04_002249JCVI_TKOH_0003099.8100.0 / 100.0Strict
TkA01G441430LXL04_002250JCVI_TKOH_0003099.195.671 / 60.136Complex
TkA01G441540LXL04_002255JCVI_TKOH_0003072.899.045 / 42.105Complex
TkA01G441560LXL04_002255JCVI_TKOH_0003095.799.561 / 24.252待复核
TkA01G441590LXL04_002239JCVI_TKOH_0003097.898.995 / 79.183Complex
TkA01G441620LXL04_002240JCVI_TKOH_0003099.5100.0 / 100.0Strict
TkA01G441680LXL04_002241JCVI_TKOH_0003078.0100.0 / 98.928Complex
TkA01G441710LXL04_002242JCVI_TKOH_00030100.0100.0 / 100.0Strict
TkA01G441720LXL04_002243JCVI_TKOH_00030100.0100.0 / 100.0待复核
TkA01G441730LXL04_002244JCVI_TKOH_0003097.186.07 / 44.588待复核
TkA01G441750LXL04_002245JCVI_TKOH_0003094.797.554 / 99.474Complex
TkA01G441760LXL04_002246JCVI_TKOH_0003099.6100.0 / 100.0待复核
TkA01G441810LXL04_002247JCVI_TKOH_0003097.8100.0 / 100.0Complex
TkA01G441820LXL04_002250JCVI_TKOH_0003071.655.581 / 38.095Complex
TkA01G442010LXL04_002249JCVI_TKOH_0003077.375.0 / 16.481Complex
TkA01G442050LXL04_002250JCVI_TKOH_0003099.395.879 / 60.136Complex
TkA01G442080LXL04_002250JCVI_TKOH_0003097.8100.0 / 24.354待复核
TkA01G442090LXL04_002251JCVI_TKOH_0003098.3100.0 / 40.592待复核
TkA01G442100LXL04_002251JCVI_TKOH_00030100.099.44 / 46.429待复核
TkA01G442120LXL04_002253JCVI_TKOH_0003093.7100.0 / 100.0Probable
TkA01G442140LXL04_002255JCVI_TKOH_0003096.782.218 / 40.557待复核
TkA01G442160LXL04_002255JCVI_TKOH_0003094.599.561 / 24.252Complex
TkA01G442210LXL04_002256JCVI_TKOH_0003098.081.075 / 78.685Probable
TkA01G442950LXL04_002259JCVI_TKOH_0003099.887.159 / 100.0Complex
TkA01G442990LXL04_002260JCVI_TKOH_0003098.3100.0 / 100.0Strict
TkA01G443000LXL04_002261JCVI_TKOH_0003076.4100.0 / 98.582Complex
TkA01G443010LXL04_002262JCVI_TKOH_0003099.5100.0 / 100.0Strict
TkA01G443030LXL04_002263JCVI_TKOH_0003098.779.0 / 36.916Complex
TkA01G443260LXL04_002263JCVI_TKOH_0003095.8100.0 / 66.355待复核
TkA01G443280LXL04_002264JCVI_TKOH_00030100.098.561 / 74.054Complex
TkA01G443310LXL04_002266JCVI_TKOH_0003099.7100.0 / 100.0Complex
TkA01G443320LXL04_002267JCVI_TKOH_0003092.7100.0 / 100.0待复核
TkA01G443510LXL04_002269JCVI_TKOH_0003087.663.571 / 13.841Complex
TkA01G443630LXL04_002270JCVI_TKOH_0003098.3100.0 / 100.0Strict
TkA01G443850LXL04_002271JCVI_TKOH_0003098.2100.0 / 100.0Strict
TkA01G443930LXL04_002272JCVI_TKOH_0003097.9100.0 / 100.0Strict
TkA01G443940LXL04_002273JCVI_TKOH_0003082.3100.0 / 98.583待复核
TkA01G444650LXL04_002278JCVI_TKOH_0003097.3100.0 / 100.0Complex
TkA01G444660LXL04_002279JCVI_TKOH_00030100.0100.0 / 100.0Complex
TkA01G444670LXL04_002280JCVI_TKOH_0003099.7100.0 / 100.0Complex
TkA01G444860LXL04_002281JCVI_TKOH_00030100.0100.0 / 100.0Complex
TkA01G444900LXL04_002284JCVI_TKOH_0003096.5100.0 / 100.0Complex
TkA01G444910LXL04_002283JCVI_TKOH_0003099.5100.0 / 100.0Complex
TkA01G444930LXL04_002282JCVI_TKOH_0003099.097.101 / 57.925待复核
TkA01G445470LXL04_002289JCVI_TKOH_0003099.9100.0 / 100.0Complex
TkA01G445550LXL04_002291JCVI_TKOH_0003076.8100.0 / 100.0待复核
TkA01G445820LXL04_002293JCVI_TKOH_0003099.0100.0 / 100.0Strict
TkA01G446030LXL04_002320JCVI_TKOH_00030100.0100.0 / 100.0Complex
TkA01G446080LXL04_002318JCVI_TKOH_0003099.188.333 / 89.076待复核
TkA01G446130LXL04_002316JCVI_TKOH_0003065.597.973 / 61.453Complex
TkA01G446250LXL04_002315JCVI_TKOH_0003082.065.926 / 60.959Complex
TkA01G446680LXL04_002313JCVI_TKOH_0003085.1100.0 / 79.447Complex
TkA01G446690LXL04_002312JCVI_TKOH_00030100.023.118 / 28.477待复核
TkA01G446780LXL04_002311JCVI_TKOH_0003066.895.349 / 57.716Complex
TkA01G446810LXL04_002310JCVI_TKOH_00030100.0100.0 / 100.0Complex
TkA01G447150LXL04_002307JCVI_TKOH_0003099.7100.0 / 50.333待复核
TkA01G447190LXL04_002306JCVI_TKOH_0003099.7100.0 / 100.0Complex
TkA01G447300LXL04_002305JCVI_TKOH_0003097.994.843 / 85.081Strict
TkA01G447440LXL04_002304JCVI_TKOH_0003099.388.235 / 50.68待复核
TkA01G447450LXL04_002303JCVI_TKOH_0003089.7100.0 / 83.454Complex
TkA01G447660LXL04_002301JCVI_TKOH_00030100.0100.0 / 100.0Complex