Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00147
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 1292
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00147

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00147 Chr03 114459386-157381471 Chr02 130535972-171456523 mixed High 200 anchors
Chr03 114459386-157381471 Chr02 130535972-171456523 JCVI_TKOH_00147 · 1292 gene pairs TkA03G458520 | LXL04_009649 | 97.6% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA03G459980 | LXL04_009655 | 94.7% | non_reciprocal_best_hit | Complex TkA03G460370 | LXL04_009656 | 97.4% | multi_candidate_from_TK1151 | Complex TkA03G460390 | LXL04_009657 | 91.6% | RBH_sequence_supported | Probable TkA03G460550 | LXL04_009658 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA03G460590 | LXL04_009659 | 99.4% | RBH_high_identity_coverage_synteny | Strict TkA03G460760 | LXL04_009660 | 99.0% | RBH_high_identity_coverage_synteny | Strict TkA03G460780 | LXL04_009662 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA03G461160 | LXL04_009663 | 100.0% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA03G461170 | LXL04_009664 | 99.3% | RBH_high_identity_coverage_synteny | Strict TkA03G461180 | LXL04_009665 | 74.8% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA03G461330 | LXL04_009667 | 98.4% | RBH_high_identity_coverage_synteny | Strict
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00147 Chr03:114459386-157381471 Chr02:130535972-171456523 mixed 1292 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 1292 · Showing 1–200 · Page 1/7

TkA03G458520 → LXL04_009649
97.6%
TkA03G459980 → LXL04_009655
94.7%
TkA03G460370 → LXL04_009656
97.4%
TkA03G460390 → LXL04_009657
91.6%
TkA03G460550 → LXL04_009658
100.0%
TkA03G460590 → LXL04_009659
99.4%
TkA03G460760 → LXL04_009660
99.0%
TkA03G460780 → LXL04_009662
100.0%
TkA03G461160 → LXL04_009663
100.0%
TkA03G461170 → LXL04_009664
99.3%
TkA03G461180 → LXL04_009665
74.8%
TkA03G461330 → LXL04_009667
98.4%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA03G458520LXL04_009649JCVI_TKOH_0014797.684.0 / 66.667Review
TkA03G459980LXL04_009655JCVI_TKOH_0014794.799.663 / 47.614Complex
TkA03G460370LXL04_009656JCVI_TKOH_0014797.4100.0 / 100.0Complex
TkA03G460390LXL04_009657JCVI_TKOH_0014791.6100.0 / 100.0Probable
TkA03G460550LXL04_009658JCVI_TKOH_00147100.0100.0 / 95.249Strict
TkA03G460590LXL04_009659JCVI_TKOH_0014799.4100.0 / 100.0Strict
TkA03G460760LXL04_009660JCVI_TKOH_0014799.0100.0 / 100.0Strict
TkA03G460780LXL04_009662JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G461160LXL04_009663JCVI_TKOH_00147100.0100.0 / 100.0Review
TkA03G461170LXL04_009664JCVI_TKOH_0014799.3100.0 / 100.0Strict
TkA03G461180LXL04_009665JCVI_TKOH_0014774.891.844 / 31.522Review
TkA03G461330LXL04_009667JCVI_TKOH_0014798.4100.0 / 100.0Strict
TkA03G461340LXL04_009668JCVI_TKOH_00147100.0100.0 / 100.0Review
TkA03G461370LXL04_009669JCVI_TKOH_0014799.6100.0 / 100.0Strict
TkA03G461400LXL04_009671JCVI_TKOH_0014770.560.44 / 99.574Review
TkA03G461620LXL04_009676JCVI_TKOH_0014799.4100.0 / 100.0Strict
TkA03G461840LXL04_009677JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G461930LXL04_009678JCVI_TKOH_0014798.1100.0 / 92.115Strict
TkA03G462100LXL04_009680JCVI_TKOH_0014757.7100.0 / 90.265Review
TkA03G462200LXL04_009681JCVI_TKOH_0014799.0100.0 / 100.0Strict
TkA03G462260LXL04_009683JCVI_TKOH_0014792.183.486 / 69.26Review
TkA03G462270LXL04_009684JCVI_TKOH_0014799.685.152 / 46.912Review
TkA03G462370LXL04_009685JCVI_TKOH_0014799.0100.0 / 100.0Strict
TkA03G462480LXL04_009687JCVI_TKOH_0014799.9100.0 / 100.0Strict
TkA03G462490LXL04_009688JCVI_TKOH_0014797.499.561 / 99.561Strict
TkA03G462510LXL04_009689JCVI_TKOH_0014797.576.415 / 47.23Review
TkA03G462790LXL04_009691JCVI_TKOH_0014798.189.729 / 86.372Strict
TkA03G462970LXL04_009692JCVI_TKOH_0014797.897.43 / 66.934Review
TkA03G463120LXL04_009693JCVI_TKOH_0014799.584.979 / 28.99Complex
TkA03G463130LXL04_009693JCVI_TKOH_0014797.080.874 / 42.606Review
TkA03G463340LXL04_009696JCVI_TKOH_0014798.9100.0 / 95.238Complex
TkA03G463420LXL04_009697JCVI_TKOH_0014799.2100.0 / 100.0Complex
TkA03G463470LXL04_009697JCVI_TKOH_0014774.0100.0 / 100.0Complex
TkA03G463490LXL04_009698JCVI_TKOH_0014799.699.184 / 98.58Complex
TkA03G463540LXL04_009699JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G464030LXL04_009689JCVI_TKOH_0014791.976.923 / 46.647Complex
TkA03G465150LXL04_009704JCVI_TKOH_00147100.098.101 / 44.286Review
TkA03G465510LXL04_009705JCVI_TKOH_0014797.197.765 / 23.522Review
TkA03G465540LXL04_009705JCVI_TKOH_0014798.494.574 / 16.398Review
TkA03G465600LXL04_009707JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G465900LXL04_009708JCVI_TKOH_0014797.388.863 / 63.167Complex
TkA03G465940LXL04_009710JCVI_TKOH_0014799.4100.0 / 100.0Strict
TkA03G466050LXL04_009712JCVI_TKOH_0014799.8100.0 / 56.226Review
TkA03G466080LXL04_009712JCVI_TKOH_0014788.492.887 / 56.604Complex
TkA03G466330LXL04_009716JCVI_TKOH_0014797.8100.0 / 100.0Strict
TkA03G466340LXL04_009717JCVI_TKOH_0014794.4100.0 / 68.75Complex
TkA03G466390LXL04_009718JCVI_TKOH_00147100.098.621 / 67.773Complex
TkA03G466420LXL04_009720JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G466430LXL04_009721JCVI_TKOH_0014779.598.573 / 49.723Complex
TkA03G466480LXL04_009721JCVI_TKOH_0014799.799.327 / 50.32Review
TkA03G466540LXL04_009722JCVI_TKOH_00147100.0100.0 / 100.0Review
TkA03G466650LXL04_009724JCVI_TKOH_00147100.097.486 / 96.944Complex
TkA03G466680LXL04_009725JCVI_TKOH_00147100.098.976 / 41.325Review
TkA03G466690LXL04_009721JCVI_TKOH_0014799.799.327 / 50.32Review
TkA03G466770LXL04_009722JCVI_TKOH_0014799.3100.0 / 100.0Complex
TkA03G466780LXL04_009723JCVI_TKOH_0014789.099.01 / 85.47Complex
TkA03G466820LXL04_009729JCVI_TKOH_00147100.0100.0 / 57.865Review
TkA03G466960LXL04_009730JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G466990LXL04_009733JCVI_TKOH_0014787.587.218 / 100.0Review
TkA03G467060LXL04_009735JCVI_TKOH_00147100.097.665 / 41.08Review
TkA03G467250LXL04_009737JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G467410LXL04_009739JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G467450LXL04_009741JCVI_TKOH_0014787.2100.0 / 100.0Review
TkA03G467460LXL04_009742JCVI_TKOH_00147100.091.667 / 73.925Probable
TkA03G467560LXL04_009743JCVI_TKOH_0014793.0100.0 / 100.0Probable
TkA03G467570LXL04_009744JCVI_TKOH_0014799.892.105 / 57.851Review
TkA03G467580LXL04_009744JCVI_TKOH_0014799.6100.0 / 30.697Review
TkA03G468320LXL04_009747JCVI_TKOH_00147100.098.558 / 98.558Complex
TkA03G468340LXL04_009749JCVI_TKOH_0014793.891.987 / 71.605Probable
TkA03G468370LXL04_009750JCVI_TKOH_0014799.599.74 / 91.647Complex
TkA03G468410LXL04_009751JCVI_TKOH_0014788.399.07 / 59.668Complex
TkA03G468420LXL04_009751JCVI_TKOH_0014779.182.996 / 31.118Complex
TkA03G468950LXL04_009755JCVI_TKOH_0014783.9100.0 / 100.0Complex
TkA03G469000LXL04_009753JCVI_TKOH_00147100.083.036 / 90.291Review
TkA03G469160LXL04_009755JCVI_TKOH_0014794.273.529 / 59.524Complex
TkA03G469390LXL04_009757JCVI_TKOH_0014789.0100.0 / 100.0Review
TkA03G469400LXL04_009758JCVI_TKOH_00147100.063.524 / 63.524Review
TkA03G469410LXL04_009759JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G469420LXL04_009760JCVI_TKOH_00147100.099.185 / 89.687Strict
TkA03G469470LXL04_009763JCVI_TKOH_00147100.0100.0 / 59.197Review
TkA03G469650LXL04_009765JCVI_TKOH_0014799.393.333 / 52.142Review
TkA03G470680LXL04_009773JCVI_TKOH_0014799.687.41 / 100.0Complex
TkA03G471010LXL04_009774JCVI_TKOH_0014787.7100.0 / 100.0Review
TkA03G471060LXL04_009775JCVI_TKOH_0014799.4100.0 / 100.0Strict
TkA03G471090LXL04_009776JCVI_TKOH_0014799.698.208 / 62.415Review
TkA03G471610LXL04_009778JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G471800LXL04_009781JCVI_TKOH_0014799.4100.0 / 100.0Review
TkA03G471820LXL04_009783JCVI_TKOH_0014795.297.917 / 97.796Complex
TkA03G471840LXL04_009784JCVI_TKOH_0014799.7100.0 / 80.127Strict
TkA03G471850LXL04_009785JCVI_TKOH_0014799.8100.0 / 100.0Strict
TkA03G471860LXL04_009786JCVI_TKOH_0014799.098.836 / 97.139Strict
TkA03G471870LXL04_009787JCVI_TKOH_0014799.6100.0 / 100.0Complex
TkA03G471920LXL04_009789JCVI_TKOH_0014797.8100.0 / 100.0Strict
TkA03G471930LXL04_009791JCVI_TKOH_0014799.0100.0 / 100.0Complex
TkA03G471940LXL04_009791JCVI_TKOH_0014798.6100.0 / 100.0Complex
TkA03G471970LXL04_009792JCVI_TKOH_0014799.893.489 / 100.0Complex
TkA03G472010LXL04_009793JCVI_TKOH_00147100.0100.0 / 86.395Review
TkA03G472030LXL04_009794JCVI_TKOH_0014799.890.84 / 96.078Strict
TkA03G472190LXL04_009795JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G473150LXL04_009796JCVI_TKOH_0014798.0100.0 / 100.0Strict
TkA03G473400LXL04_009798JCVI_TKOH_00147100.082.838 / 76.994Complex
TkA03G473690LXL04_009801JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G473790LXL04_009802JCVI_TKOH_0014795.999.279 / 81.89Strict
TkA03G473880LXL04_009803JCVI_TKOH_0014799.796.547 / 89.058Strict
TkA03G474130LXL04_009804JCVI_TKOH_0014799.190.4 / 96.17Complex
TkA03G474380LXL04_009809JCVI_TKOH_0014799.3100.0 / 100.0Review
TkA03G474400LXL04_009813JCVI_TKOH_0014788.7100.0 / 100.0Complex
TkA03G474410LXL04_009818JCVI_TKOH_00147100.0100.0 / 86.312Strict
TkA03G474420LXL04_009819JCVI_TKOH_0014799.388.095 / 100.0Complex
TkA03G474440LXL04_009820JCVI_TKOH_00147100.076.871 / 85.606Complex
TkA03G475810LXL04_009827JCVI_TKOH_0014792.5100.0 / 36.859Review
TkA03G476110LXL04_009829JCVI_TKOH_0014764.696.078 / 91.346Review
TkA03G476560LXL04_009833JCVI_TKOH_0014789.953.171 / 81.343Review
TkA03G476640LXL04_009841JCVI_TKOH_0014784.380.909 / 89.0Complex
TkA03G476890LXL04_009834JCVI_TKOH_00147100.095.238 / 100.0Review
TkA03G477060LXL04_009836JCVI_TKOH_0014794.590.099 / 98.913Complex
TkA03G477070LXL04_009838JCVI_TKOH_0014769.379.935 / 96.916Review
TkA03G477140LXL04_009839JCVI_TKOH_0014798.0100.0 / 74.074Review
TkA03G477240LXL04_009834JCVI_TKOH_0014794.734.545 / 38.0Complex
TkA03G477370LXL04_009833JCVI_TKOH_0014776.762.5 / 64.179Complex
TkA03G477520LXL04_009843JCVI_TKOH_0014799.0100.0 / 100.0Review
TkA03G478090LXL04_009844JCVI_TKOH_0014778.0100.0 / 100.0Review
TkA03G478320LXL04_009847JCVI_TKOH_0014797.0100.0 / 100.0Review
TkA03G478330LXL04_009848JCVI_TKOH_0014797.0100.0 / 100.0Review
TkA03G478460LXL04_009850JCVI_TKOH_0014792.0100.0 / 100.0Complex
TkA03G478810LXL04_009854JCVI_TKOH_0014759.6100.0 / 95.49Review
TkA03G478910LXL04_009855JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G478920LXL04_009856JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G479000LXL04_009859JCVI_TKOH_00147100.076.174 / 99.127Complex
TkA03G479400LXL04_009863JCVI_TKOH_0014794.8100.0 / 100.0Probable
TkA03G479410LXL04_009864JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G479470LXL04_009867JCVI_TKOH_0014791.896.078 / 28.406Review
TkA03G479500LXL04_009868JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G479530LXL04_009872JCVI_TKOH_0014758.8100.0 / 100.0Complex
TkA03G479570LXL04_009873JCVI_TKOH_00147100.0100.0 / 100.0Review
TkA03G479640LXL04_009875JCVI_TKOH_0014799.8100.0 / 100.0Strict
TkA03G479670LXL04_009876JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G479740LXL04_009877JCVI_TKOH_00147100.0100.0 / 85.03Strict
TkA03G479890LXL04_009879JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G479900LXL04_009880JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G479910LXL04_009881JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G479920LXL04_009882JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G479930LXL04_009883JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G479960LXL04_009884JCVI_TKOH_00147100.096.038 / 99.032Strict
TkA03G480010LXL04_009885JCVI_TKOH_0014799.6100.0 / 100.0Strict
TkA03G480020LXL04_009886JCVI_TKOH_00147100.0100.0 / 98.152Strict
TkA03G480030LXL04_009887JCVI_TKOH_00147100.097.887 / 89.103Strict
TkA03G480280LXL04_009888JCVI_TKOH_0014791.1100.0 / 100.0Probable
TkA03G480450LXL04_009891JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G480700LXL04_009895JCVI_TKOH_0014798.987.5 / 88.249Strict
TkA03G481200LXL04_009897JCVI_TKOH_00147100.0100.0 / 52.113Review
TkA03G481370LXL04_009898JCVI_TKOH_0014799.1100.0 / 100.0Strict
TkA03G481400LXL04_009899JCVI_TKOH_0014799.198.387 / 94.964Strict
TkA03G481410LXL04_009900JCVI_TKOH_0014788.497.101 / 45.887Review
TkA03G481420LXL04_009901JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G481490LXL04_009904JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G481500LXL04_009905JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G481650LXL04_009906JCVI_TKOH_0014797.5100.0 / 100.0Strict
TkA03G481870LXL04_009907JCVI_TKOH_0014798.9100.0 / 100.0Strict
TkA03G481970LXL04_009910JCVI_TKOH_0014774.080.822 / 85.083Complex
TkA03G482030LXL04_009911JCVI_TKOH_0014785.0100.0 / 100.0Review
TkA03G482140LXL04_009914JCVI_TKOH_00147100.0100.0 / 89.293Complex
TkA03G482300LXL04_009916JCVI_TKOH_0014799.7100.0 / 100.0Strict
TkA03G482580LXL04_009919JCVI_TKOH_0014798.7100.0 / 100.0Review
TkA03G482590LXL04_009920JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G482610LXL04_009921JCVI_TKOH_00147100.0100.0 / 100.0Review
TkA03G482810LXL04_009919JCVI_TKOH_00147100.0100.0 / 100.0Review
TkA03G482820LXL04_009920JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G482850LXL04_009921JCVI_TKOH_0014766.7100.0 / 100.0Complex
TkA03G482990LXL04_009929JCVI_TKOH_0014784.176.667 / 30.065Complex
TkA03G483000LXL04_009923JCVI_TKOH_0014790.774.843 / 94.275Probable
TkA03G483020LXL04_009924JCVI_TKOH_0014794.593.143 / 88.108Probable
TkA03G483080LXL04_009920JCVI_TKOH_0014793.0100.0 / 83.529Complex
TkA03G483290LXL04_009920JCVI_TKOH_0014797.6100.0 / 61.471Complex
TkA03G483310LXL04_009930JCVI_TKOH_00147100.0100.0 / 64.632Complex
TkA03G483350LXL04_009931JCVI_TKOH_0014797.4100.0 / 100.0Strict
TkA03G483360LXL04_009932JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G483370LXL04_009933JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G483420LXL04_009934JCVI_TKOH_0014799.5100.0 / 100.0Complex
TkA03G483580LXL04_009937JCVI_TKOH_0014799.5100.0 / 100.0Review
TkA03G483730LXL04_009943JCVI_TKOH_0014799.2100.0 / 99.812Strict
TkA03G483740LXL04_009944JCVI_TKOH_00147100.099.764 / 66.667Complex
TkA03G483760LXL04_009945JCVI_TKOH_0014790.9100.0 / 100.0Complex
TkA03G483770LXL04_009946JCVI_TKOH_0014799.6100.0 / 100.0Complex
TkA03G483800LXL04_009947JCVI_TKOH_0014798.860.606 / 34.188Complex
TkA03G484230LXL04_009948JCVI_TKOH_0014799.4100.0 / 97.233Complex
TkA03G484240LXL04_009949JCVI_TKOH_00147100.077.863 / 89.083Complex
TkA03G484520LXL04_009944JCVI_TKOH_00147100.099.764 / 66.667Complex
TkA03G484560LXL04_009945JCVI_TKOH_0014790.598.576 / 98.42Complex
TkA03G484570LXL04_009946JCVI_TKOH_0014798.898.904 / 99.312Complex
TkA03G484730LXL04_009948JCVI_TKOH_00147100.0100.0 / 97.233Complex
TkA03G484740LXL04_009949JCVI_TKOH_00147100.077.863 / 89.083Complex
TkA03G485250LXL04_009951JCVI_TKOH_0014799.3100.0 / 100.0Review
TkA03G485260LXL04_009952JCVI_TKOH_0014799.7100.0 / 100.0Complex
TkA03G485270LXL04_009953JCVI_TKOH_0014799.5100.0 / 100.0Strict
TkA03G485280LXL04_009954JCVI_TKOH_00147100.0100.0 / 100.0Review
TkA03G485290LXL04_009952JCVI_TKOH_0014781.8100.0 / 100.0Complex
TkA03G485500LXL04_009955JCVI_TKOH_0014798.7100.0 / 100.0Complex
TkA03G485510LXL04_009956JCVI_TKOH_0014798.8100.0 / 100.0Strict
TkA03G485520LXL04_009957JCVI_TKOH_0014799.4100.0 / 70.096Complex