Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00352

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 134

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00352

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00352 Chr08 69432512-79579620 Chr07 44937292-55009660 mixed High 134 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00352`	Chr08:69432512-79579620	Chr07:44937292-55009660	mixed	134	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 134 · Showing 1–134 · Page 1/1

Download All Anchors TSV

TkA08G266440 → LXL04_033475

97.2%

TkA08G266700 → LXL04_033479

95.9%

TkA08G266730 → LXL04_033480

99.4%

TkA08G267840 → LXL04_033486

69.3%

TkA08G268290 → LXL04_033497

69.2%

TkA08G268320 → LXL04_033488

98.1%

TkA08G268700 → LXL04_033490

99.0%

TkA08G268720 → LXL04_033493

99.1%

TkA08G268790 → LXL04_033500

67.1%

TkA08G268820 → LXL04_033494

99.6%

TkA08G268880 → LXL04_033496

84.6%

TkA08G269000 → LXL04_033497

99.8%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA08G266440`	`LXL04_033475`	`JCVI_TKOH_00352`	97.2	100.0 / 100.0	Complex
`TkA08G266700`	`LXL04_033479`	`JCVI_TKOH_00352`	95.9	100.0 / 100.0	Strict
`TkA08G266730`	`LXL04_033480`	`JCVI_TKOH_00352`	99.4	100.0 / 86.726	Strict
`TkA08G267840`	`LXL04_033486`	`JCVI_TKOH_00352`	69.3	98.864 / 100.0	Complex
`TkA08G268290`	`LXL04_033497`	`JCVI_TKOH_00352`	69.2	96.059 / 28.247	Complex
`TkA08G268320`	`LXL04_033488`	`JCVI_TKOH_00352`	98.1	73.944 / 100.0	Probable
`TkA08G268700`	`LXL04_033490`	`JCVI_TKOH_00352`	99.0	89.936 / 89.552	Complex
`TkA08G268720`	`LXL04_033493`	`JCVI_TKOH_00352`	99.1	100.0 / 88.889	Complex
`TkA08G268790`	`LXL04_033500`	`JCVI_TKOH_00352`	67.1	98.625 / 86.469	Complex
`TkA08G268820`	`LXL04_033494`	`JCVI_TKOH_00352`	99.6	87.066 / 66.506	Complex
`TkA08G268880`	`LXL04_033496`	`JCVI_TKOH_00352`	84.6	79.375 / 84.225	Complex
`TkA08G269000`	`LXL04_033497`	`JCVI_TKOH_00352`	99.8	100.0 / 54.729	Review
`TkA08G269220`	`LXL04_033500`	`JCVI_TKOH_00352`	67.9	100.0 / 80.338	Complex
`TkA08G269440`	`LXL04_033501`	`JCVI_TKOH_00352`	85.4	100.0 / 100.0	Review
`TkA08G269450`	`LXL04_033502`	`JCVI_TKOH_00352`	99.3	100.0 / 100.0	Strict
`TkA08G269470`	`LXL04_033503`	`JCVI_TKOH_00352`	98.6	100.0 / 100.0	Review
`TkA08G269510`	`LXL04_033504`	`JCVI_TKOH_00352`	91.3	95.0 / 18.433	Complex
`TkA08G269700`	`LXL04_033507`	`JCVI_TKOH_00352`	99.8	100.0 / 100.0	Complex
`TkA08G269720`	`LXL04_033515`	`JCVI_TKOH_00352`	59.3	99.569 / 31.593	Complex
`TkA08G270010`	`LXL04_033512`	`JCVI_TKOH_00352`	94.0	86.731 / 29.43	Review
`TkA08G270070`	`LXL04_033513`	`JCVI_TKOH_00352`	96.2	100.0 / 100.0	Strict
`TkA08G270080`	`LXL04_033514`	`JCVI_TKOH_00352`	94.8	100.0 / 100.0	Probable
`TkA08G270100`	`LXL04_033515`	`JCVI_TKOH_00352`	71.6	100.0 / 58.768	Review
`TkA08G270160`	`LXL04_033519`	`JCVI_TKOH_00352`	84.5	91.045 / 87.458	Complex
`TkA08G270230`	`LXL04_033517`	`JCVI_TKOH_00352`	74.0	86.381 / 56.219	Complex
`TkA08G270280`	`LXL04_033519`	`JCVI_TKOH_00352`	81.8	91.319 / 87.458	Complex
`TkA08G270320`	`LXL04_033521`	`JCVI_TKOH_00352`	92.7	91.954 / 97.531	Probable
`TkA08G270350`	`LXL04_033524`	`JCVI_TKOH_00352`	98.1	98.639 / 76.416	Probable
`TkA08G270560`	`LXL04_033528`	`JCVI_TKOH_00352`	99.0	100.0 / 100.0	Strict
`TkA08G270910`	`LXL04_033531`	`JCVI_TKOH_00352`	98.6	99.767 / 21.421	Review
`TkA08G270930`	`LXL04_033531`	`JCVI_TKOH_00352`	94.4	100.0 / 62.913	Review
`TkA08G271230`	`LXL04_033533`	`JCVI_TKOH_00352`	99.8	100.0 / 100.0	Strict
`TkA08G271510`	`LXL04_033535`	`JCVI_TKOH_00352`	92.6	79.832 / 31.987	Review
`TkA08G271570`	`LXL04_033536`	`JCVI_TKOH_00352`	100.0	100.0 / 100.0	Strict
`TkA08G271780`	`LXL04_033537`	`JCVI_TKOH_00352`	100.0	95.882 / 83.59	Complex
`TkA08G271860`	`LXL04_033538`	`JCVI_TKOH_00352`	98.3	84.559 / 75.163	Complex
`TkA08G272030`	`LXL04_033539`	`JCVI_TKOH_00352`	100.0	100.0 / 21.07	Review
`TkA08G272040`	`LXL04_033539`	`JCVI_TKOH_00352`	77.8	89.231 / 18.476	Complex
`TkA08G272440`	`LXL04_033541`	`JCVI_TKOH_00352`	97.1	100.0 / 100.0	Complex
`TkA08G272590`	`LXL04_033545`	`JCVI_TKOH_00352`	100.0	100.0 / 100.0	Complex
`TkA08G273060`	`LXL04_033547`	`JCVI_TKOH_00352`	95.0	100.0 / 100.0	Complex
`TkA08G273240`	`LXL04_033548`	`JCVI_TKOH_00352`	98.2	100.0 / 100.0	Complex
`TkA08G273540`	`LXL04_033550`	`JCVI_TKOH_00352`	99.3	95.804 / 53.101	Review
`TkA08G273670`	`LXL04_033552`	`JCVI_TKOH_00352`	91.1	85.024 / 86.099	Review
`TkA08G273770`	`LXL04_033553`	`JCVI_TKOH_00352`	100.0	81.034 / 21.759	Complex
`TkA08G273800`	`LXL04_033556`	`JCVI_TKOH_00352`	67.2	97.977 / 94.13	Complex
`TkA08G273810`	`LXL04_033557`	`JCVI_TKOH_00352`	72.4	68.391 / 38.263	Complex
`TkA08G273820`	`LXL04_033557`	`JCVI_TKOH_00352`	99.0	86.207 / 23.239	Review
`TkA08G273830`	`LXL04_033558`	`JCVI_TKOH_00352`	95.2	68.293 / 8.87	Complex
`TkA08G273860`	`LXL04_033560`	`JCVI_TKOH_00352`	98.9	100.0 / 100.0	Complex
`TkA08G273930`	`LXL04_033561`	`JCVI_TKOH_00352`	97.7	99.943 / 95.442	Complex
`TkA08G274100`	`LXL04_033563`	`JCVI_TKOH_00352`	100.0	100.0 / 100.0	Complex
`TkA08G274480`	`LXL04_033566`	`JCVI_TKOH_00352`	100.0	100.0 / 100.0	Strict
`TkA08G275140`	`LXL04_033574`	`JCVI_TKOH_00352`	100.0	83.14 / 80.791	Strict
`TkA08G275750`	`LXL04_033576`	`JCVI_TKOH_00352`	100.0	100.0 / 100.0	Complex
`TkA08G276950`	`LXL04_033586`	`JCVI_TKOH_00352`	99.7	88.473 / 91.369	Strict
`TkA08G277080`	`LXL04_033588`	`JCVI_TKOH_00352`	100.0	100.0 / 100.0	Complex
`TkA08G278050`	`LXL04_033591`	`JCVI_TKOH_00352`	99.2	100.0 / 100.0	Strict
`TkA08G278090`	`LXL04_033592`	`JCVI_TKOH_00352`	98.9	100.0 / 100.0	Strict
`TkA08G278100`	`LXL04_033593`	`JCVI_TKOH_00352`	91.3	90.801 / 46.26	Review
`TkA08G278480`	`LXL04_033596`	`JCVI_TKOH_00352`	81.9	99.427 / 72.379	Complex
`TkA08G278940`	`LXL04_033596`	`JCVI_TKOH_00352`	96.6	100.0 / 100.0	Complex
`TkA08G279020`	`LXL04_033597`	`JCVI_TKOH_00352`	97.1	95.028 / 38.652	Review
`TkA08G279350`	`LXL04_033596`	`JCVI_TKOH_00352`	81.4	99.129 / 94.153	Complex
`TkA08G279380`	`LXL04_033596`	`JCVI_TKOH_00352`	97.2	100.0 / 100.0	Complex
`TkA08G279570`	`LXL04_033597`	`JCVI_TKOH_00352`	100.0	91.743 / 22.472	Review
`TkA08G280100`	`LXL04_033600`	`JCVI_TKOH_00352`	99.5	100.0 / 100.0	Complex
`TkA08G282950`	`LXL04_033609`	`JCVI_TKOH_00352`	100.0	100.0 / 100.0	Strict
`TkA08G283360`	`LXL04_033611`	`JCVI_TKOH_00352`	100.0	100.0 / 100.0	Complex
`TkA08G285930`	`LXL04_033615`	`JCVI_TKOH_00352`	95.6	100.0 / 100.0	Strict
`TkA08G285950`	`LXL04_033616`	`JCVI_TKOH_00352`	97.6	100.0 / 100.0	Strict
`TkA08G286110`	`LXL04_033618`	`JCVI_TKOH_00352`	98.7	100.0 / 100.0	Strict
`TkA08G286180`	`LXL04_033620`	`JCVI_TKOH_00352`	85.4	100.0 / 100.0	Review
`TkA08G286260`	`LXL04_033621`	`JCVI_TKOH_00352`	100.0	100.0 / 100.0	Strict
`TkA08G286790`	`LXL04_033624`	`JCVI_TKOH_00352`	86.0	96.543 / 100.0	Complex
`TkA08G287070`	`LXL04_033624`	`JCVI_TKOH_00352`	90.4	96.543 / 100.0	Complex
`TkA08G288230`	`LXL04_033626`	`JCVI_TKOH_00352`	99.4	100.0 / 100.0	Complex
`TkA08G288240`	`LXL04_033624`	`JCVI_TKOH_00352`	48.8	91.969 / 97.521	Complex
`TkA08G288430`	`LXL04_033630`	`JCVI_TKOH_00352`	99.5	100.0 / 100.0	Strict
`TkA08G289860`	`LXL04_033638`	`JCVI_TKOH_00352`	86.1	89.003 / 74.873	Review
`TkA08G290680`	`LXL04_033640`	`JCVI_TKOH_00352`	98.1	43.258 / 74.038	Review
`TkA08G290730`	`LXL04_033641`	`JCVI_TKOH_00352`	99.5	100.0 / 81.898	Strict
`TkA08G291270`	`LXL04_033645`	`JCVI_TKOH_00352`	86.2	100.0 / 100.0	Complex
`TkA08G291890`	`LXL04_033648`	`JCVI_TKOH_00352`	98.4	99.465 / 41.06	Review
`TkA08G291960`	`LXL04_033650`	`JCVI_TKOH_00352`	100.0	100.0 / 100.0	Complex
`TkA08G292060`	`LXL04_033652`	`JCVI_TKOH_00352`	95.4	100.0 / 90.081	Complex
`TkA08G292380`	`LXL04_033653`	`JCVI_TKOH_00352`	91.6	100.0 / 100.0	Complex
`TkA08G292880`	`LXL04_033655`	`JCVI_TKOH_00352`	99.4	100.0 / 100.0	Review
`TkA08G292890`	`LXL04_033656`	`JCVI_TKOH_00352`	96.6	100.0 / 100.0	Complex
`TkA08G293170`	`LXL04_033657`	`JCVI_TKOH_00352`	98.3	100.0 / 39.29	Review
`TkA08G293200`	`LXL04_033658`	`JCVI_TKOH_00352`	93.8	98.693 / 75.379	Probable
`TkA08G293440`	`LXL04_033659`	`JCVI_TKOH_00352`	99.4	95.679 / 55.556	Review
`TkA08G294460`	`LXL04_033650`	`JCVI_TKOH_00352`	100.0	86.667 / 73.952	Complex
`TkA08G294550`	`LXL04_033652`	`JCVI_TKOH_00352`	95.4	100.0 / 90.081	Complex
`TkA08G294780`	`LXL04_033653`	`JCVI_TKOH_00352`	100.0	100.0 / 100.0	Complex
`TkA08G294930`	`LXL04_033654`	`JCVI_TKOH_00352`	93.5	95.597 / 62.551	Review
`TkA08G295130`	`LXL04_033655`	`JCVI_TKOH_00352`	100.0	100.0 / 100.0	Review
`TkA08G295140`	`LXL04_033656`	`JCVI_TKOH_00352`	96.6	100.0 / 100.0	Complex
`TkA08G295400`	`LXL04_033657`	`JCVI_TKOH_00352`	100.0	65.517 / 17.411	Complex
`TkA08G295490`	`LXL04_033658`	`JCVI_TKOH_00352`	96.2	69.322 / 39.46	Complex
`TkA08G295850`	`LXL04_033659`	`JCVI_TKOH_00352`	97.1	95.238 / 50.179	Review
`TkA08G296820`	`LXL04_033671`	`JCVI_TKOH_00352`	82.4	72.951 / 65.882	Complex
`TkA08G297000`	`LXL04_033674`	`JCVI_TKOH_00352`	100.0	33.333 / 1.386	Complex
`TkA08G297030`	`LXL04_033674`	`JCVI_TKOH_00352`	54.6	92.542 / 19.323	Complex
`TkA08G297280`	`LXL04_033669`	`JCVI_TKOH_00352`	66.4	77.778 / 81.879	Complex
`TkA08G297730`	`LXL04_033671`	`JCVI_TKOH_00352`	98.0	63.507 / 67.563	Complex
`TkA08G297830`	`LXL04_033669`	`JCVI_TKOH_00352`	96.6	87.5 / 39.933	Review
`TkA08G297840`	`LXL04_033676`	`JCVI_TKOH_00352`	75.5	81.308 / 52.0	Complex
`TkA08G298110`	`LXL04_033676`	`JCVI_TKOH_00352`	98.5	99.161 / 94.6	Complex
`TkA08G298800`	`LXL04_033676`	`JCVI_TKOH_00352`	55.4	89.313 / 89.2	Complex
`TkA08G298890`	`LXL04_033679`	`JCVI_TKOH_00352`	98.9	100.0 / 100.0	Strict
`TkA08G299330`	`LXL04_033684`	`JCVI_TKOH_00352`	94.3	100.0 / 29.228	Complex
`TkA08G300440`	`LXL04_033688`	`JCVI_TKOH_00352`	100.0	100.0 / 100.0	Strict
`TkA08G301220`	`LXL04_033689`	`JCVI_TKOH_00352`	92.7	67.681 / 31.616	Complex
`TkA08G301310`	`LXL04_033689`	`JCVI_TKOH_00352`	96.8	100.0 / 99.29	Review
`TkA08G301330`	`LXL04_033691`	`JCVI_TKOH_00352`	80.4	42.056 / 29.143	Review
`TkA08G302030`	`LXL04_033700`	`JCVI_TKOH_00352`	99.5	100.0 / 100.0	Complex
`TkA08G302270`	`LXL04_033698`	`JCVI_TKOH_00352`	96.9	100.0 / 100.0	Strict
`TkA08G302320`	`LXL04_033695`	`JCVI_TKOH_00352`	91.6	99.702 / 84.383	Probable
`TkA08G302920`	`LXL04_033704`	`JCVI_TKOH_00352`	94.9	95.289 / 99.853	Complex
`TkA08G303050`	`LXL04_033707`	`JCVI_TKOH_00352`	78.3	99.609 / 39.905	Complex
`TkA08G303060`	`LXL04_033708`	`JCVI_TKOH_00352`	93.0	95.798 / 67.857	Review
`TkA08G303090`	`LXL04_033709`	`JCVI_TKOH_00352`	99.5	100.0 / 58.635	Review
`TkA08G303230`	`LXL04_033734`	`JCVI_TKOH_00352`	86.5	93.502 / 90.4	Complex
`TkA08G304410`	`LXL04_033729`	`JCVI_TKOH_00352`	96.7	99.617 / 88.435	Complex
`TkA08G304470`	`LXL04_033728`	`JCVI_TKOH_00352`	78.4	98.319 / 68.203	Complex
`TkA08G304570`	`LXL04_033724`	`JCVI_TKOH_00352`	100.0	31.933 / 11.95	Complex
`TkA08G304730`	`LXL04_033723`	`JCVI_TKOH_00352`	100.0	100.0 / 100.0	Strict
`TkA08G305990`	`LXL04_033717`	`JCVI_TKOH_00352`	100.0	100.0 / 90.541	Complex
`TkA08G306020`	`LXL04_033716`	`JCVI_TKOH_00352`	100.0	100.0 / 100.0	Strict
`TkA08G306030`	`LXL04_033715`	`JCVI_TKOH_00352`	66.2	94.406 / 100.0	Review
`TkA08G307470`	`LXL04_033709`	`JCVI_TKOH_00352`	99.8	100.0 / 58.635	Review
`TkA08G307500`	`LXL04_033741`	`JCVI_TKOH_00352`	59.1	99.193 / 78.332	Complex
`TkA08G307530`	`LXL04_033704`	`JCVI_TKOH_00352`	90.0	94.267 / 99.853	Complex