同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00028
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 89
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00028

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00028 Chr01 102042714-106054136 Chr01 57354794-61717444 mixed High 89 anchors
Chr01 102042714-106054136 Chr01 57354794-61717444 JCVI_TKOH_00028 · 89 gene pairs TkA01G408920 | LXL04_002935 | 47.6% | non_reciprocal_best_hit | Complex TkA01G410890 | LXL04_002918 | 86.8% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA01G411000 | LXL04_002917 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA01G411040 | LXL04_002917 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA01G411090 | LXL04_002916 | 99.2% | RBH_high_identity_coverage_synteny | Strict TkA01G411110 | LXL04_002915 | 97.1% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA01G411850 | LXL04_002911 | 74.4% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA01G411910 | LXL04_002910 | 98.0% | RBH_high_identity_coverage_synteny | Strict TkA01G412330 | LXL04_002904 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA01G412480 | LXL04_002900 | 99.2% | multi_source_to_OH1004 | Complex TkA01G412830 | LXL04_002898 | 78.3% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA01G412890 | LXL04_002896 | 97.7% | RBH_high_identity_coverage_synteny | Strict
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00028 Chr01:102042714-106054136 Chr01:57354794-61717444 mixed 89 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 89 · 当前范围 1–89 · 页码 1/1

TkA01G408920 → LXL04_002935
47.6%
TkA01G410890 → LXL04_002918
86.8%
TkA01G411000 → LXL04_002917
100.0%
TkA01G411040 → LXL04_002917
100.0%
TkA01G411090 → LXL04_002916
99.2%
TkA01G411110 → LXL04_002915
97.1%
TkA01G411850 → LXL04_002911
74.4%
TkA01G411910 → LXL04_002910
98.0%
TkA01G412330 → LXL04_002904
100.0%
TkA01G412480 → LXL04_002900
99.2%
TkA01G412830 → LXL04_002898
78.3%
TkA01G412890 → LXL04_002896
97.7%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA01G408920LXL04_002935JCVI_TKOH_0002847.685.794 / 68.874Complex
TkA01G410890LXL04_002918JCVI_TKOH_0002886.863.423 / 86.656待复核
TkA01G411000LXL04_002917JCVI_TKOH_00028100.0100.0 / 39.946待复核
TkA01G411040LXL04_002917JCVI_TKOH_00028100.0100.0 / 39.946待复核
TkA01G411090LXL04_002916JCVI_TKOH_0002899.2100.0 / 100.0Strict
TkA01G411110LXL04_002915JCVI_TKOH_0002897.198.81 / 67.667待复核
TkA01G411850LXL04_002911JCVI_TKOH_0002874.4100.0 / 83.007待复核
TkA01G411910LXL04_002910JCVI_TKOH_0002898.0100.0 / 100.0Strict
TkA01G412330LXL04_002904JCVI_TKOH_00028100.086.992 / 55.297待复核
TkA01G412480LXL04_002900JCVI_TKOH_0002899.2100.0 / 68.571Complex
TkA01G412830LXL04_002898JCVI_TKOH_0002878.3100.0 / 77.703待复核
TkA01G412890LXL04_002896JCVI_TKOH_0002897.7100.0 / 100.0Strict
TkA01G413330LXL04_002891JCVI_TKOH_0002899.899.808 / 85.655Strict
TkA01G414420LXL04_002884JCVI_TKOH_0002899.0100.0 / 100.0Complex
TkA01G414450LXL04_002882JCVI_TKOH_0002886.168.608 / 100.0Complex
TkA01G414560LXL04_002881JCVI_TKOH_0002898.599.2 / 72.77Complex
TkA01G414780LXL04_002879JCVI_TKOH_0002899.2100.0 / 100.0待复核
TkA01G414850LXL04_002876JCVI_TKOH_0002898.599.005 / 93.868待复核
TkA01G415240LXL04_002875JCVI_TKOH_00028100.0100.0 / 62.366Complex
TkA01G415300LXL04_002874JCVI_TKOH_00028100.099.048 / 95.413待复核
TkA01G415310LXL04_002873JCVI_TKOH_0002899.2100.0 / 100.0Strict
TkA01G415340LXL04_002871JCVI_TKOH_0002899.182.143 / 40.351待复核
TkA01G415360LXL04_002870JCVI_TKOH_0002885.892.15 / 73.566Complex
TkA01G415610LXL04_002868JCVI_TKOH_0002896.6100.0 / 100.0Strict
TkA01G416050LXL04_002862JCVI_TKOH_0002899.2100.0 / 100.0Complex
TkA01G416160LXL04_002857JCVI_TKOH_0002897.584.896 / 55.631Complex
TkA01G416310LXL04_002855JCVI_TKOH_0002899.4100.0 / 100.0待复核
TkA01G416470LXL04_002854JCVI_TKOH_00028100.0100.0 / 100.0Complex
TkA01G416590LXL04_002851JCVI_TKOH_0002899.4100.0 / 42.005待复核
TkA01G417060LXL04_002844JCVI_TKOH_0002882.699.248 / 36.389Complex
TkA01G417100LXL04_002844JCVI_TKOH_0002880.977.113 / 60.278Complex
TkA01G417310LXL04_002844JCVI_TKOH_00028100.0100.0 / 100.0Complex
TkA01G417320LXL04_002843JCVI_TKOH_0002899.5100.0 / 100.0Strict
TkA01G417330LXL04_002842JCVI_TKOH_0002899.699.802 / 51.373待复核
TkA01G417690LXL04_002838JCVI_TKOH_0002899.1100.0 / 100.0Complex
TkA01G417730LXL04_002837JCVI_TKOH_0002899.3100.0 / 100.0Strict
TkA01G417740LXL04_002836JCVI_TKOH_0002898.3100.0 / 100.0Strict
TkA01G417770LXL04_002835JCVI_TKOH_0002876.9100.0 / 96.866Complex
TkA01G417910LXL04_002833JCVI_TKOH_0002892.999.812 / 72.436Probable
TkA01G417920LXL04_002833JCVI_TKOH_0002898.984.951 / 22.436Complex
TkA01G417930LXL04_002832JCVI_TKOH_0002894.4100.0 / 37.403待复核
TkA01G417950LXL04_002831JCVI_TKOH_0002898.7100.0 / 54.839待复核
TkA01G418260LXL04_002830JCVI_TKOH_0002899.5100.0 / 100.0Complex
TkA01G418400LXL04_002828JCVI_TKOH_0002898.0100.0 / 100.0Strict
TkA01G418410LXL04_002827JCVI_TKOH_0002896.1100.0 / 100.0Strict
TkA01G418460LXL04_002825JCVI_TKOH_0002899.2100.0 / 100.0Complex
TkA01G418490LXL04_002824JCVI_TKOH_0002898.9100.0 / 100.0Complex
TkA01G418510LXL04_002823JCVI_TKOH_0002897.5100.0 / 100.0Strict
TkA01G418710LXL04_002818JCVI_TKOH_0002886.8100.0 / 100.0待复核
TkA01G418800LXL04_002816JCVI_TKOH_0002898.7100.0 / 93.536Complex
TkA01G419080LXL04_002813JCVI_TKOH_0002897.999.828 / 99.657Complex
TkA01G419090LXL04_002812JCVI_TKOH_0002899.9100.0 / 94.767Strict
TkA01G419200LXL04_002811JCVI_TKOH_0002897.5100.0 / 100.0Strict
TkA01G419220LXL04_002810JCVI_TKOH_0002891.0100.0 / 100.0Probable
TkA01G419670LXL04_002806JCVI_TKOH_00028100.076.8 / 32.107Complex
TkA01G419910LXL04_002804JCVI_TKOH_0002896.5100.0 / 82.456Complex
TkA01G420260LXL04_002799JCVI_TKOH_00028100.0100.0 / 100.0Strict
TkA01G420470LXL04_002798JCVI_TKOH_00028100.0100.0 / 100.0Strict
TkA01G420500LXL04_002796JCVI_TKOH_00028100.097.333 / 77.385Complex
TkA01G420510LXL04_002795JCVI_TKOH_0002899.5100.0 / 94.282Strict
TkA01G420550LXL04_002794JCVI_TKOH_0002899.4100.0 / 100.0Strict
TkA01G420560LXL04_002793JCVI_TKOH_0002892.7100.0 / 100.0Probable
TkA01G420570LXL04_002792JCVI_TKOH_0002897.6100.0 / 100.0Complex
TkA01G420620LXL04_002791JCVI_TKOH_0002899.4100.0 / 100.0待复核
TkA01G420870LXL04_002789JCVI_TKOH_0002886.2100.0 / 100.0待复核
TkA01G420880LXL04_002788JCVI_TKOH_00028100.0100.0 / 100.0Strict
TkA01G420890LXL04_002787JCVI_TKOH_0002894.1100.0 / 100.0Probable
TkA01G420900LXL04_002786JCVI_TKOH_00028100.0100.0 / 100.0Strict
TkA01G421000LXL04_002783JCVI_TKOH_0002897.7100.0 / 87.557Strict
TkA01G421010LXL04_002784JCVI_TKOH_0002899.9100.0 / 100.0Strict
TkA01G421030LXL04_002782JCVI_TKOH_0002899.6100.0 / 100.0Complex
TkA01G421120LXL04_002780JCVI_TKOH_00028100.083.117 / 83.117Strict
TkA01G421130LXL04_002779JCVI_TKOH_00028100.0100.0 / 100.0Strict
TkA01G421150LXL04_002778JCVI_TKOH_0002870.9100.0 / 70.606Complex
TkA01G421440LXL04_002776JCVI_TKOH_0002890.7100.0 / 100.0Probable
TkA01G421720LXL04_002773JCVI_TKOH_0002898.090.964 / 98.693待复核
TkA01G421750LXL04_002773JCVI_TKOH_0002878.984.971 / 96.078Complex
TkA01G422060LXL04_002771JCVI_TKOH_0002898.4100.0 / 100.0Strict
TkA01G422440LXL04_002770JCVI_TKOH_0002895.4100.0 / 100.0Strict
TkA01G422540LXL04_002769JCVI_TKOH_0002890.6100.0 / 70.982Probable
TkA01G422630LXL04_002768JCVI_TKOH_0002899.4100.0 / 100.0Strict
TkA01G422680LXL04_002765JCVI_TKOH_0002898.6100.0 / 100.0Strict
TkA01G423160LXL04_002761JCVI_TKOH_00028100.099.592 / 77.215Complex
TkA01G423250LXL04_002760JCVI_TKOH_0002872.097.519 / 97.692待复核
TkA01G424420LXL04_002756JCVI_TKOH_0002899.596.97 / 78.367Complex
TkA01G424450LXL04_002755JCVI_TKOH_0002898.2100.0 / 100.0Strict
TkA01G424670LXL04_002754JCVI_TKOH_0002898.7100.0 / 100.0Strict
TkA01G424690LXL04_002753JCVI_TKOH_0002897.749.153 / 49.153待复核
TkA01G424720LXL04_002752JCVI_TKOH_00028100.050.211 / 70.414待复核