Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00313

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 111

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00313

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00313 Chr07 97263076-101077360 Chr06 112108560-115493633 mixed High 111 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00313`	Chr07:97263076-101077360	Chr06:112108560-115493633	mixed	111	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 111 · Showing 1–111 · Page 1/1

Download All Anchors TSV

TkA07G387810 → LXL04_030245

100.0%

TkA07G387830 → LXL04_030242

97.7%

TkA07G387930 → LXL04_030241

99.7%

TkA07G388150 → LXL04_030239

99.4%

TkA07G388230 → LXL04_030237

99.2%

TkA07G389880 → LXL04_030249

100.0%

TkA07G390130 → LXL04_030252

96.9%

TkA07G390150 → LXL04_030253

87.7%

TkA07G390160 → LXL04_030254

99.2%

TkA07G391340 → LXL04_030258

100.0%

TkA07G391560 → LXL04_030261

100.0%

TkA07G391620 → LXL04_030263

99.7%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA07G387810`	`LXL04_030245`	`JCVI_TKOH_00313`	100.0	100.0 / 92.5	Strict
`TkA07G387830`	`LXL04_030242`	`JCVI_TKOH_00313`	97.7	100.0 / 55.808	Review
`TkA07G387930`	`LXL04_030241`	`JCVI_TKOH_00313`	99.7	100.0 / 100.0	Strict
`TkA07G388150`	`LXL04_030239`	`JCVI_TKOH_00313`	99.4	98.83 / 62.247	Review
`TkA07G388230`	`LXL04_030237`	`JCVI_TKOH_00313`	99.2	100.0 / 100.0	Strict
`TkA07G389880`	`LXL04_030249`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Complex
`TkA07G390130`	`LXL04_030252`	`JCVI_TKOH_00313`	96.9	100.0 / 100.0	Strict
`TkA07G390150`	`LXL04_030253`	`JCVI_TKOH_00313`	87.7	100.0 / 100.0	Review
`TkA07G390160`	`LXL04_030254`	`JCVI_TKOH_00313`	99.2	98.613 / 94.382	Strict
`TkA07G391340`	`LXL04_030258`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Complex
`TkA07G391560`	`LXL04_030261`	`JCVI_TKOH_00313`	100.0	91.406 / 100.0	Strict
`TkA07G391620`	`LXL04_030263`	`JCVI_TKOH_00313`	99.7	100.0 / 83.784	Strict
`TkA07G391780`	`LXL04_030265`	`JCVI_TKOH_00313`	76.0	98.241 / 32.369	Complex
`TkA07G391790`	`LXL04_030265`	`JCVI_TKOH_00313`	99.5	100.0 / 21.329	Review
`TkA07G392410`	`LXL04_030270`	`JCVI_TKOH_00313`	98.4	100.0 / 100.0	Complex
`TkA07G392610`	`LXL04_030272`	`JCVI_TKOH_00313`	99.1	100.0 / 100.0	Strict
`TkA07G392690`	`LXL04_030273`	`JCVI_TKOH_00313`	98.7	100.0 / 100.0	Complex
`TkA07G392920`	`LXL04_030285`	`JCVI_TKOH_00313`	97.6	100.0 / 50.1	Review
`TkA07G392970`	`LXL04_030283`	`JCVI_TKOH_00313`	91.1	100.0 / 97.407	Complex
`TkA07G393500`	`LXL04_030281`	`JCVI_TKOH_00313`	100.0	30.415 / 13.608	Complex
`TkA07G394450`	`LXL04_030283`	`JCVI_TKOH_00313`	90.9	94.818 / 100.0	Complex
`TkA07G394490`	`LXL04_030283`	`JCVI_TKOH_00313`	90.9	100.0 / 97.407	Complex
`TkA07G394540`	`LXL04_030285`	`JCVI_TKOH_00313`	98.4	100.0 / 100.0	Complex
`TkA07G394760`	`LXL04_030286`	`JCVI_TKOH_00313`	99.5	100.0 / 100.0	Complex
`TkA07G394770`	`LXL04_030288`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Strict
`TkA07G394780`	`LXL04_030289`	`JCVI_TKOH_00313`	100.0	100.0 / 92.366	Strict
`TkA07G394800`	`LXL04_030292`	`JCVI_TKOH_00313`	99.8	100.0 / 100.0	Strict
`TkA07G395010`	`LXL04_030294`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Complex
`TkA07G395510`	`LXL04_030296`	`JCVI_TKOH_00313`	99.0	100.0 / 100.0	Review
`TkA07G395520`	`LXL04_030297`	`JCVI_TKOH_00313`	100.0	100.0 / 70.748	Complex
`TkA07G395540`	`LXL04_030294`	`JCVI_TKOH_00313`	81.5	98.718 / 97.161	Complex
`TkA07G395780`	`LXL04_030298`	`JCVI_TKOH_00313`	99.6	99.614 / 95.203	Strict
`TkA07G395820`	`LXL04_030300`	`JCVI_TKOH_00313`	97.6	100.0 / 100.0	Strict
`TkA07G395830`	`LXL04_030301`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Complex
`TkA07G395840`	`LXL04_030302`	`JCVI_TKOH_00313`	99.3	100.0 / 83.747	Strict
`TkA07G395900`	`LXL04_030303`	`JCVI_TKOH_00313`	99.7	94.808 / 100.0	Strict
`TkA07G395910`	`LXL04_030304`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Strict
`TkA07G396190`	`LXL04_030305`	`JCVI_TKOH_00313`	99.9	100.0 / 100.0	Strict
`TkA07G396200`	`LXL04_030306`	`JCVI_TKOH_00313`	100.0	100.0 / 80.769	Strict
`TkA07G396210`	`LXL04_030307`	`JCVI_TKOH_00313`	62.5	99.78 / 43.6	Complex
`TkA07G396230`	`LXL04_030307`	`JCVI_TKOH_00313`	95.5	67.785 / 16.68	Complex
`TkA07G396240`	`LXL04_030307`	`JCVI_TKOH_00313`	98.3	98.87 / 14.451	Review
`TkA07G396250`	`LXL04_030308`	`JCVI_TKOH_00313`	92.0	100.0 / 100.0	Probable
`TkA07G396360`	`LXL04_030310`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Strict
`TkA07G396780`	`LXL04_030314`	`JCVI_TKOH_00313`	97.8	100.0 / 100.0	Complex
`TkA07G396790`	`LXL04_030315`	`JCVI_TKOH_00313`	99.5	100.0 / 98.413	Strict
`TkA07G396800`	`LXL04_030316`	`JCVI_TKOH_00313`	99.6	100.0 / 100.0	Strict
`TkA07G396810`	`LXL04_030317`	`JCVI_TKOH_00313`	100.0	72.131 / 98.876	Probable
`TkA07G396980`	`LXL04_030318`	`JCVI_TKOH_00313`	100.0	88.67 / 59.211	Review
`TkA07G397170`	`LXL04_030319`	`JCVI_TKOH_00313`	99.2	95.455 / 82.895	Strict
`TkA07G397350`	`LXL04_030320`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Strict
`TkA07G397510`	`LXL04_030322`	`JCVI_TKOH_00313`	99.3	100.0 / 100.0	Strict
`TkA07G397520`	`LXL04_030323`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Strict
`TkA07G397540`	`LXL04_030324`	`JCVI_TKOH_00313`	99.9	100.0 / 100.0	Strict
`TkA07G397550`	`LXL04_030325`	`JCVI_TKOH_00313`	99.7	100.0 / 72.998	Review
`TkA07G397570`	`LXL04_030328`	`JCVI_TKOH_00313`	98.8	100.0 / 100.0	Strict
`TkA07G397580`	`LXL04_030329`	`JCVI_TKOH_00313`	99.4	100.0 / 100.0	Strict
`TkA07G397590`	`LXL04_030330`	`JCVI_TKOH_00313`	96.0	97.18 / 93.595	Strict
`TkA07G397690`	`LXL04_030331`	`JCVI_TKOH_00313`	95.9	100.0 / 100.0	Strict
`TkA07G397700`	`LXL04_030332`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Strict
`TkA07G397800`	`LXL04_030333`	`JCVI_TKOH_00313`	99.6	100.0 / 100.0	Strict
`TkA07G398120`	`LXL04_030334`	`JCVI_TKOH_00313`	99.5	100.0 / 88.865	Strict
`TkA07G398150`	`LXL04_030335`	`JCVI_TKOH_00313`	98.5	99.699 / 99.701	Strict
`TkA07G398160`	`LXL04_030336`	`JCVI_TKOH_00313`	69.3	97.794 / 94.027	Review
`TkA07G398240`	`LXL04_030337`	`JCVI_TKOH_00313`	97.9	95.989 / 87.24	Strict
`TkA07G398260`	`LXL04_030338`	`JCVI_TKOH_00313`	99.5	100.0 / 100.0	Strict
`TkA07G398440`	`LXL04_030339`	`JCVI_TKOH_00313`	99.6	100.0 / 100.0	Strict
`TkA07G398720`	`LXL04_030340`	`JCVI_TKOH_00313`	96.7	100.0 / 100.0	Strict
`TkA07G398940`	`LXL04_030344`	`JCVI_TKOH_00313`	100.0	100.0 / 90.153	Strict
`TkA07G398950`	`LXL04_030345`	`JCVI_TKOH_00313`	99.7	100.0 / 85.532	Strict
`TkA07G398960`	`LXL04_030346`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Strict
`TkA07G399250`	`LXL04_030348`	`JCVI_TKOH_00313`	98.5	100.0 / 100.0	Complex
`TkA07G399320`	`LXL04_030350`	`JCVI_TKOH_00313`	96.8	53.448 / 24.125	Review
`TkA07G399700`	`LXL04_030355`	`JCVI_TKOH_00313`	100.0	79.245 / 100.0	Complex
`TkA07G399710`	`LXL04_030356`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Strict
`TkA07G399720`	`LXL04_030358`	`JCVI_TKOH_00313`	57.8	98.742 / 39.56	Complex
`TkA07G399730`	`LXL04_030358`	`JCVI_TKOH_00313`	100.0	100.0 / 59.78	Review
`TkA07G399760`	`LXL04_030361`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Strict
`TkA07G399770`	`LXL04_030362`	`JCVI_TKOH_00313`	95.5	100.0 / 100.0	Strict
`TkA07G399790`	`LXL04_030363`	`JCVI_TKOH_00313`	100.0	100.0 / 99.595	Complex
`TkA07G399800`	`LXL04_030364`	`JCVI_TKOH_00313`	100.0	100.0 / 88.312	Strict
`TkA07G399820`	`LXL04_030365`	`JCVI_TKOH_00313`	97.6	100.0 / 100.0	Strict
`TkA07G399830`	`LXL04_030366`	`JCVI_TKOH_00313`	100.0	100.0 / 95.868	Strict
`TkA07G400040`	`LXL04_030368`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Strict
`TkA07G400050`	`LXL04_030369`	`JCVI_TKOH_00313`	99.8	100.0 / 100.0	Strict
`TkA07G400060`	`LXL04_030370`	`JCVI_TKOH_00313`	83.0	83.128 / 68.466	Review
`TkA07G400160`	`LXL04_030372`	`JCVI_TKOH_00313`	99.8	100.0 / 100.0	Strict
`TkA07G400190`	`LXL04_030373`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Strict
`TkA07G400330`	`LXL04_030374`	`JCVI_TKOH_00313`	85.4	100.0 / 53.038	Complex
`TkA07G400360`	`LXL04_030375`	`JCVI_TKOH_00313`	75.9	97.99 / 85.549	Review
`TkA07G400370`	`LXL04_030376`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Strict
`TkA07G400380`	`LXL04_030377`	`JCVI_TKOH_00313`	93.6	96.07 / 89.941	Probable
`TkA07G400400`	`LXL04_030378`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Complex
`TkA07G400470`	`LXL04_030380`	`JCVI_TKOH_00313`	99.6	100.0 / 100.0	Complex
`TkA07G400580`	`LXL04_030381`	`JCVI_TKOH_00313`	100.0	100.0 / 91.727	Strict
`TkA07G400600`	`LXL04_030382`	`JCVI_TKOH_00313`	99.7	97.583 / 91.501	Strict
`TkA07G400820`	`LXL04_030387`	`JCVI_TKOH_00313`	98.9	94.987 / 62.718	Complex
`TkA07G400870`	`LXL04_030389`	`JCVI_TKOH_00313`	88.4	86.154 / 67.879	Review
`TkA07G400930`	`LXL04_030387`	`JCVI_TKOH_00313`	85.6	98.738 / 61.847	Complex
`TkA07G400940`	`LXL04_030390`	`JCVI_TKOH_00313`	99.2	100.0 / 59.447	Review
`TkA07G400970`	`LXL04_030391`	`JCVI_TKOH_00313`	99.2	100.0 / 79.034	Probable
`TkA07G401050`	`LXL04_030392`	`JCVI_TKOH_00313`	92.8	100.0 / 91.392	Probable
`TkA07G401180`	`LXL04_030402`	`JCVI_TKOH_00313`	35.8	88.525 / 26.009	Complex
`TkA07G401660`	`LXL04_030394`	`JCVI_TKOH_00313`	99.8	100.0 / 93.774	Review
`TkA07G401780`	`LXL04_030396`	`JCVI_TKOH_00313`	99.0	100.0 / 97.181	Strict
`TkA07G401830`	`LXL04_030398`	`JCVI_TKOH_00313`	100.0	100.0 / 89.78	Strict
`TkA07G401890`	`LXL04_030400`	`JCVI_TKOH_00313`	100.0	99.747 / 99.495	Complex
`TkA07G401980`	`LXL04_030401`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Complex
`TkA07G402220`	`LXL04_030404`	`JCVI_TKOH_00313`	100.0	100.0 / 100.0	Strict
`TkA07G402320`	`LXL04_030406`	`JCVI_TKOH_00313`	91.2	100.0 / 100.0	Probable
`TkA07G402350`	`LXL04_030407`	`JCVI_TKOH_00313`	99.0	100.0 / 100.0	Review