Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00203

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 170

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00203

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00203 Chr04 96249948-106822916 Chr09 29662458-39093740 mixed High 170 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00203`	Chr04:96249948-106822916	Chr09:29662458-39093740	mixed	170	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 170 · Showing 1–170 · Page 1/1

Download All Anchors TSV

TkA04G382360 → LXL04_038037

67.8%

TkA04G382700 → LXL04_038054

92.8%

TkA04G385230 → LXL04_038044

92.2%

TkA04G385480 → LXL04_038059

96.1%

TkA04G385580 → LXL04_038061

98.3%

TkA04G385650 → LXL04_038062

99.3%

TkA04G386150 → LXL04_038068

99.7%

TkA04G386160 → LXL04_038069

99.2%

TkA04G386170 → LXL04_038070

99.8%

TkA04G386180 → LXL04_038071

98.1%

TkA04G386200 → LXL04_038072

99.0%

TkA04G387020 → LXL04_038077

100.0%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA04G382360`	`LXL04_038037`	`JCVI_TKOH_00203`	67.8	100.0 / 49.738	Review
`TkA04G382700`	`LXL04_038054`	`JCVI_TKOH_00203`	92.8	100.0 / 100.0	Complex
`TkA04G385230`	`LXL04_038044`	`JCVI_TKOH_00203`	92.2	100.0 / 100.0	Probable
`TkA04G385480`	`LXL04_038059`	`JCVI_TKOH_00203`	96.1	99.29 / 92.007	Strict
`TkA04G385580`	`LXL04_038061`	`JCVI_TKOH_00203`	98.3	55.869 / 80.952	Complex
`TkA04G385650`	`LXL04_038062`	`JCVI_TKOH_00203`	99.3	42.857 / 100.0	Review
`TkA04G386150`	`LXL04_038068`	`JCVI_TKOH_00203`	99.7	98.343 / 72.653	Complex
`TkA04G386160`	`LXL04_038069`	`JCVI_TKOH_00203`	99.2	100.0 / 100.0	Strict
`TkA04G386170`	`LXL04_038070`	`JCVI_TKOH_00203`	99.8	100.0 / 100.0	Strict
`TkA04G386180`	`LXL04_038071`	`JCVI_TKOH_00203`	98.1	100.0 / 95.365	Strict
`TkA04G386200`	`LXL04_038072`	`JCVI_TKOH_00203`	99.0	78.571 / 47.826	Complex
`TkA04G387020`	`LXL04_038077`	`JCVI_TKOH_00203`	100.0	100.0 / 100.0	Strict
`TkA04G387360`	`LXL04_038079`	`JCVI_TKOH_00203`	76.1	92.222 / 89.545	Review
`TkA04G387590`	`LXL04_038080`	`JCVI_TKOH_00203`	99.1	75.497 / 99.138	Probable
`TkA04G387600`	`LXL04_038082`	`JCVI_TKOH_00203`	100.0	100.0 / 100.0	Strict
`TkA04G387670`	`LXL04_038084`	`JCVI_TKOH_00203`	97.5	99.375 / 86.022	Strict
`TkA04G387800`	`LXL04_038085`	`JCVI_TKOH_00203`	96.5	100.0 / 92.458	Strict
`TkA04G387820`	`LXL04_038086`	`JCVI_TKOH_00203`	99.8	100.0 / 100.0	Complex
`TkA04G387930`	`LXL04_038090`	`JCVI_TKOH_00203`	99.2	85.748 / 49.049	Review
`TkA04G388050`	`LXL04_038091`	`JCVI_TKOH_00203`	95.2	85.211 / 42.955	Review
`TkA04G388090`	`LXL04_038093`	`JCVI_TKOH_00203`	92.0	100.0 / 100.0	Complex
`TkA04G388530`	`LXL04_038096`	`JCVI_TKOH_00203`	75.9	53.906 / 54.397	Review
`TkA04G388560`	`LXL04_038097`	`JCVI_TKOH_00203`	100.0	100.0 / 71.014	Review
`TkA04G388670`	`LXL04_038099`	`JCVI_TKOH_00203`	99.0	68.276 / 56.897	Complex
`TkA04G388910`	`LXL04_038103`	`JCVI_TKOH_00203`	100.0	77.206 / 19.886	Complex
`TkA04G390040`	`LXL04_038112`	`JCVI_TKOH_00203`	98.1	98.807 / 27.989	Review
`TkA04G390050`	`LXL04_038112`	`JCVI_TKOH_00203`	99.3	84.503 / 19.633	Complex
`TkA04G390390`	`LXL04_038114`	`JCVI_TKOH_00203`	100.0	100.0 / 80.0	Review
`TkA04G390450`	`LXL04_038115`	`JCVI_TKOH_00203`	98.3	100.0 / 100.0	Review
`TkA04G390560`	`LXL04_038117`	`JCVI_TKOH_00203`	99.7	100.0 / 61.379	Complex
`TkA04G390570`	`LXL04_038118`	`JCVI_TKOH_00203`	100.0	100.0 / 100.0	Review
`TkA04G390660`	`LXL04_038122`	`JCVI_TKOH_00203`	99.3	98.973 / 65.385	Complex
`TkA04G393910`	`LXL04_038124`	`JCVI_TKOH_00203`	99.1	100.0 / 100.0	Complex
`TkA04G394150`	`LXL04_038128`	`JCVI_TKOH_00203`	99.4	100.0 / 100.0	Strict
`TkA04G394220`	`LXL04_038130`	`JCVI_TKOH_00203`	99.0	100.0 / 100.0	Strict
`TkA04G394230`	`LXL04_038131`	`JCVI_TKOH_00203`	99.6	96.538 / 98.431	Strict
`TkA04G394270`	`LXL04_038133`	`JCVI_TKOH_00203`	97.3	89.54 / 100.0	Strict
`TkA04G394630`	`LXL04_038134`	`JCVI_TKOH_00203`	99.7	100.0 / 100.0	Strict
`TkA04G394640`	`LXL04_038142`	`JCVI_TKOH_00203`	67.7	77.5 / 27.139	Complex
`TkA04G394860`	`LXL04_038140`	`JCVI_TKOH_00203`	98.9	100.0 / 90.201	Review
`TkA04G394920`	`LXL04_038140`	`JCVI_TKOH_00203`	93.3	99.721 / 89.95	Complex
`TkA04G394950`	`LXL04_038142`	`JCVI_TKOH_00203`	96.5	48.666 / 91.74	Review
`TkA04G395280`	`LXL04_038151`	`JCVI_TKOH_00203`	93.9	90.0 / 20.755	Complex
`TkA04G395500`	`LXL04_038151`	`JCVI_TKOH_00203`	98.9	100.0 / 79.665	Complex
`TkA04G395740`	`LXL04_038152`	`JCVI_TKOH_00203`	99.4	100.0 / 100.0	Complex
`TkA04G395780`	`LXL04_038154`	`JCVI_TKOH_00203`	98.6	100.0 / 100.0	Complex
`TkA04G395790`	`LXL04_038155`	`JCVI_TKOH_00203`	98.9	100.0 / 100.0	Review
`TkA04G395860`	`LXL04_038157`	`JCVI_TKOH_00203`	99.6	100.0 / 100.0	Review
`TkA04G395870`	`LXL04_038158`	`JCVI_TKOH_00203`	96.5	100.0 / 100.0	Complex
`TkA04G397400`	`LXL04_038164`	`JCVI_TKOH_00203`	100.0	100.0 / 100.0	Complex
`TkA04G399260`	`LXL04_038151`	`JCVI_TKOH_00203`	98.7	100.0 / 79.665	Complex
`TkA04G399270`	`LXL04_038152`	`JCVI_TKOH_00203`	99.4	100.0 / 100.0	Complex
`TkA04G399310`	`LXL04_038154`	`JCVI_TKOH_00203`	98.8	100.0 / 100.0	Complex
`TkA04G399320`	`LXL04_038155`	`JCVI_TKOH_00203`	98.9	100.0 / 100.0	Review
`TkA04G399380`	`LXL04_038157`	`JCVI_TKOH_00203`	99.8	100.0 / 100.0	Review
`TkA04G399390`	`LXL04_038158`	`JCVI_TKOH_00203`	96.5	100.0 / 100.0	Complex
`TkA04G400560`	`LXL04_038164`	`JCVI_TKOH_00203`	99.6	94.271 / 94.271	Complex
`TkA04G400770`	`LXL04_038170`	`JCVI_TKOH_00203`	95.5	98.881 / 52.165	Review
`TkA04G400910`	`LXL04_038171`	`JCVI_TKOH_00203`	86.3	52.277 / 96.866	Review
`TkA04G401060`	`LXL04_038177`	`JCVI_TKOH_00203`	83.0	39.331 / 24.668	Complex
`TkA04G401080`	`LXL04_038175`	`JCVI_TKOH_00203`	96.6	48.377 / 100.0	Review
`TkA04G401470`	`LXL04_038177`	`JCVI_TKOH_00203`	100.0	100.0 / 100.0	Complex
`TkA04G401500`	`LXL04_038178`	`JCVI_TKOH_00203`	100.0	100.0 / 100.0	Complex
`TkA04G401510`	`LXL04_038179`	`JCVI_TKOH_00203`	100.0	100.0 / 100.0	Review
`TkA04G401730`	`LXL04_038180`	`JCVI_TKOH_00203`	100.0	13.285 / 7.383	Review
`TkA04G401740`	`LXL04_038180`	`JCVI_TKOH_00203`	100.0	17.538 / 7.651	Complex
`TkA04G402820`	`LXL04_038170`	`JCVI_TKOH_00203`	97.6	100.0 / 100.0	Complex
`TkA04G403140`	`LXL04_038177`	`JCVI_TKOH_00203`	92.3	86.27 / 99.735	Complex
`TkA04G403270`	`LXL04_038177`	`JCVI_TKOH_00203`	100.0	91.667 / 40.849	Review
`TkA04G403280`	`LXL04_038177`	`JCVI_TKOH_00203`	99.3	81.522 / 39.788	Complex
`TkA04G403370`	`LXL04_038178`	`JCVI_TKOH_00203`	99.5	100.0 / 100.0	Complex
`TkA04G403380`	`LXL04_038179`	`JCVI_TKOH_00203`	100.0	100.0 / 100.0	Review
`TkA04G403700`	`LXL04_038180`	`JCVI_TKOH_00203`	56.7	28.169 / 8.054	Complex
`TkA04G403860`	`LXL04_038180`	`JCVI_TKOH_00203`	100.0	23.276 / 7.248	Complex
`TkA04G404020`	`LXL04_038182`	`JCVI_TKOH_00203`	90.9	98.039 / 67.485	Review
`TkA04G404930`	`LXL04_038186`	`JCVI_TKOH_00203`	99.8	100.0 / 100.0	Strict
`TkA04G405800`	`LXL04_038202`	`JCVI_TKOH_00203`	98.8	100.0 / 100.0	Complex
`TkA04G405870`	`LXL04_038203`	`JCVI_TKOH_00203`	98.7	100.0 / 100.0	Complex
`TkA04G405960`	`LXL04_038206`	`JCVI_TKOH_00203`	93.9	100.0 / 100.0	Complex
`TkA04G406150`	`LXL04_038206`	`JCVI_TKOH_00203`	83.9	30.392 / 3.042	Complex
`TkA04G406460`	`LXL04_038212`	`JCVI_TKOH_00203`	97.4	83.55 / 96.985	Strict
`TkA04G406660`	`LXL04_038216`	`JCVI_TKOH_00203`	97.5	99.495 / 99.495	Strict
`TkA04G406680`	`LXL04_038219`	`JCVI_TKOH_00203`	99.6	100.0 / 100.0	Complex
`TkA04G406690`	`LXL04_038220`	`JCVI_TKOH_00203`	98.7	100.0 / 42.507	Review
`TkA04G407660`	`LXL04_038224`	`JCVI_TKOH_00203`	98.9	100.0 / 70.238	Probable
`TkA04G407790`	`LXL04_038226`	`JCVI_TKOH_00203`	97.6	100.0 / 100.0	Complex
`TkA04G407810`	`LXL04_038227`	`JCVI_TKOH_00203`	95.4	100.0 / 68.153	Review
`TkA04G407950`	`LXL04_038230`	`JCVI_TKOH_00203`	100.0	100.0 / 100.0	Strict
`TkA04G408010`	`LXL04_038231`	`JCVI_TKOH_00203`	100.0	100.0 / 80.0	Review
`TkA04G408020`	`LXL04_038232`	`JCVI_TKOH_00203`	100.0	98.261 / 19.825	Review
`TkA04G408030`	`LXL04_038232`	`JCVI_TKOH_00203`	73.3	100.0 / 67.018	Complex
`TkA04G408410`	`LXL04_038236`	`JCVI_TKOH_00203`	89.8	100.0 / 100.0	Complex
`TkA04G408460`	`LXL04_038238`	`JCVI_TKOH_00203`	98.9	100.0 / 100.0	Strict
`TkA04G408490`	`LXL04_038239`	`JCVI_TKOH_00203`	95.8	100.0 / 100.0	Strict
`TkA04G408970`	`LXL04_038249`	`JCVI_TKOH_00203`	75.6	35.484 / 67.241	Complex
`TkA04G409010`	`LXL04_038247`	`JCVI_TKOH_00203`	98.9	67.969 / 37.826	Review
`TkA04G409030`	`LXL04_038248`	`JCVI_TKOH_00203`	88.4	66.154 / 65.649	Complex
`TkA04G409300`	`LXL04_038248`	`JCVI_TKOH_00203`	98.9	69.466 / 69.466	Complex
`TkA04G409450`	`LXL04_038249`	`JCVI_TKOH_00203`	77.5	64.234 / 76.724	Complex
`TkA04G409500`	`LXL04_038249`	`JCVI_TKOH_00203`	100.0	100.0 / 100.0	Complex
`TkA04G409820`	`LXL04_038252`	`JCVI_TKOH_00203`	100.0	83.929 / 49.735	Review
`TkA04G409860`	`LXL04_038256`	`JCVI_TKOH_00203`	92.5	100.0 / 100.0	Probable
`TkA04G410200`	`LXL04_038257`	`JCVI_TKOH_00203`	63.0	52.258 / 18.97	Complex
`TkA04G410400`	`LXL04_038260`	`JCVI_TKOH_00203`	99.1	94.068 / 56.345	Review
`TkA04G410420`	`LXL04_038261`	`JCVI_TKOH_00203`	100.0	73.548 / 58.763	Complex
`TkA04G410540`	`LXL04_038262`	`JCVI_TKOH_00203`	99.4	100.0 / 100.0	Strict
`TkA04G412260`	`LXL04_038268`	`JCVI_TKOH_00203`	99.9	99.885 / 99.77	Strict
`TkA04G412820`	`LXL04_038270`	`JCVI_TKOH_00203`	99.2	100.0 / 92.731	Complex
`TkA04G413010`	`LXL04_038271`	`JCVI_TKOH_00203`	93.8	83.721 / 37.795	Complex
`TkA04G413030`	`LXL04_038272`	`JCVI_TKOH_00203`	100.0	98.276 / 82.609	Review
`TkA04G413040`	`LXL04_038273`	`JCVI_TKOH_00203`	100.0	100.0 / 100.0	Strict
`TkA04G413070`	`LXL04_038274`	`JCVI_TKOH_00203`	98.1	100.0 / 100.0	Complex
`TkA04G413110`	`LXL04_038275`	`JCVI_TKOH_00203`	94.8	100.0 / 100.0	Probable
`TkA04G413250`	`LXL04_038278`	`JCVI_TKOH_00203`	58.0	100.0 / 100.0	Review
`TkA04G413290`	`LXL04_038282`	`JCVI_TKOH_00203`	73.0	55.0 / 34.118	Complex
`TkA04G413610`	`LXL04_038280`	`JCVI_TKOH_00203`	83.9	30.097 / 10.508	Complex
`TkA04G413890`	`LXL04_038281`	`JCVI_TKOH_00203`	96.3	100.0 / 100.0	Complex
`TkA04G414070`	`LXL04_038282`	`JCVI_TKOH_00203`	100.0	42.439 / 34.118	Review
`TkA04G414200`	`LXL04_038283`	`JCVI_TKOH_00203`	76.8	95.161 / 65.238	Review
`TkA04G414290`	`LXL04_038286`	`JCVI_TKOH_00203`	99.7	100.0 / 87.529	Review
`TkA04G414600`	`LXL04_038288`	`JCVI_TKOH_00203`	100.0	100.0 / 100.0	Strict
`TkA04G414780`	`LXL04_038289`	`JCVI_TKOH_00203`	97.1	100.0 / 100.0	Strict
`TkA04G414880`	`LXL04_038294`	`JCVI_TKOH_00203`	98.5	100.0 / 50.98	Review
`TkA04G414990`	`LXL04_038297`	`JCVI_TKOH_00203`	90.8	100.0 / 100.0	Probable
`TkA04G415000`	`LXL04_038298`	`JCVI_TKOH_00203`	99.3	74.074 / 71.795	Complex
`TkA04G415210`	`LXL04_038300`	`JCVI_TKOH_00203`	98.4	81.132 / 50.0	Review
`TkA04G415270`	`LXL04_038302`	`JCVI_TKOH_00203`	90.7	100.0 / 100.0	Probable
`TkA04G415850`	`LXL04_038305`	`JCVI_TKOH_00203`	92.2	99.405 / 67.467	Complex
`TkA04G415960`	`LXL04_038308`	`JCVI_TKOH_00203`	99.3	100.0 / 100.0	Complex
`TkA04G415970`	`LXL04_038309`	`JCVI_TKOH_00203`	90.3	71.343 / 91.493	Probable
`TkA04G416830`	`LXL04_038316`	`JCVI_TKOH_00203`	99.3	100.0 / 100.0	Strict
`TkA04G416970`	`LXL04_038317`	`JCVI_TKOH_00203`	98.8	76.256 / 90.323	Probable
`TkA04G417320`	`LXL04_038321`	`JCVI_TKOH_00203`	94.8	100.0 / 100.0	Probable
`TkA04G417350`	`LXL04_038323`	`JCVI_TKOH_00203`	98.7	100.0 / 100.0	Strict
`TkA04G418130`	`LXL04_038327`	`JCVI_TKOH_00203`	96.7	100.0 / 100.0	Strict
`TkA04G418390`	`LXL04_038331`	`JCVI_TKOH_00203`	99.0	93.762 / 100.0	Strict
`TkA04G419430`	`LXL04_038346`	`JCVI_TKOH_00203`	87.0	100.0 / 57.19	Review
`TkA04G419460`	`LXL04_038350`	`JCVI_TKOH_00203`	100.0	100.0 / 100.0	Review
`TkA04G419480`	`LXL04_038351`	`JCVI_TKOH_00203`	99.7	99.365 / 91.52	Complex
`TkA04G419510`	`LXL04_038353`	`JCVI_TKOH_00203`	92.4	100.0 / 100.0	Complex
`TkA04G419520`	`LXL04_038354`	`JCVI_TKOH_00203`	98.9	100.0 / 100.0	Complex
`TkA04G419570`	`LXL04_038357`	`JCVI_TKOH_00203`	97.1	99.0 / 91.572	Complex
`TkA04G419790`	`LXL04_038358`	`JCVI_TKOH_00203`	100.0	100.0 / 54.567	Review
`TkA04G420000`	`LXL04_038359`	`JCVI_TKOH_00203`	100.0	88.35 / 62.759	Complex
`TkA04G420010`	`LXL04_038360`	`JCVI_TKOH_00203`	98.7	100.0 / 100.0	Complex
`TkA04G420180`	`LXL04_038363`	`JCVI_TKOH_00203`	98.7	100.0 / 100.0	Review
`TkA04G420350`	`LXL04_038366`	`JCVI_TKOH_00203`	93.3	100.0 / 100.0	Probable
`TkA04G420450`	`LXL04_038367`	`JCVI_TKOH_00203`	99.7	100.0 / 100.0	Complex
`TkA04G420470`	`LXL04_038369`	`JCVI_TKOH_00203`	99.8	100.0 / 100.0	Complex
`TkA04G420480`	`LXL04_038370`	`JCVI_TKOH_00203`	98.9	85.437 / 26.347	Review
`TkA04G420510`	`LXL04_038370`	`JCVI_TKOH_00203`	100.0	100.0 / 51.796	Review
`TkA04G420860`	`LXL04_038375`	`JCVI_TKOH_00203`	98.4	100.0 / 100.0	Strict
`TkA04G420900`	`LXL04_038376`	`JCVI_TKOH_00203`	72.3	100.0 / 99.675	Review
`TkA04G420940`	`LXL04_038377`	`JCVI_TKOH_00203`	99.3	100.0 / 100.0	Strict
`TkA04G422240`	`LXL04_038380`	`JCVI_TKOH_00203`	50.2	96.465 / 64.839	Complex
`TkA04G422450`	`LXL04_038380`	`JCVI_TKOH_00203`	51.9	81.0 / 50.323	Complex
`TkA04G422470`	`LXL04_038379`	`JCVI_TKOH_00203`	96.6	100.0 / 100.0	Review
`TkA04G422500`	`LXL04_038380`	`JCVI_TKOH_00203`	88.6	85.253 / 64.194	Complex
`TkA04G422600`	`LXL04_038381`	`JCVI_TKOH_00203`	96.9	99.237 / 41.667	Review
`TkA04G422610`	`LXL04_038381`	`JCVI_TKOH_00203`	72.2	100.0 / 46.154	Complex
`TkA04G423030`	`LXL04_038364`	`JCVI_TKOH_00203`	98.7	69.091 / 47.5	Complex
`TkA04G423120`	`LXL04_038363`	`JCVI_TKOH_00203`	100.0	100.0 / 100.0	Review
`TkA04G423370`	`LXL04_038360`	`JCVI_TKOH_00203`	100.0	100.0 / 100.0	Complex
`TkA04G423400`	`LXL04_038359`	`JCVI_TKOH_00203`	98.9	86.667 / 62.759	Complex
`TkA04G423480`	`LXL04_038358`	`JCVI_TKOH_00203`	99.7	100.0 / 87.019	Review
`TkA04G423600`	`LXL04_038357`	`JCVI_TKOH_00203`	96.9	98.999 / 91.572	Complex
`TkA04G423640`	`LXL04_038354`	`JCVI_TKOH_00203`	97.7	95.531 / 60.854	Complex
`TkA04G423650`	`LXL04_038353`	`JCVI_TKOH_00203`	91.9	98.466 / 99.22	Complex
`TkA04G423660`	`LXL04_038351`	`JCVI_TKOH_00203`	99.7	99.365 / 91.52	Complex
`TkA04G423670`	`LXL04_038350`	`JCVI_TKOH_00203`	100.0	100.0 / 100.0	Review