Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00035

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 140

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00035

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00035 Chr01 118283978-123346019 Chr01 38735054-44331871 mixed High 140 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00035`	Chr01:118283978-123346019	Chr01:38735054-44331871	mixed	140	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 140 · Showing 1–140 · Page 1/1

Download All Anchors TSV

TkA01G472480 → LXL04_002228

89.9%

TkA01G472510 → LXL04_002228

89.6%

TkA01G472810 → LXL04_002227

99.3%

TkA01G473090 → LXL04_002226

91.5%

TkA01G473370 → LXL04_002224

96.3%

TkA01G473650 → LXL04_002222

100.0%

TkA01G473660 → LXL04_002221

99.5%

TkA01G474190 → LXL04_002219

100.0%

TkA01G474200 → LXL04_002218

100.0%

TkA01G474210 → LXL04_002217

100.0%

TkA01G474320 → LXL04_002216

100.0%

TkA01G474330 → LXL04_002216

100.0%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA01G472480`	`LXL04_002228`	`JCVI_TKOH_00035`	89.9	100.0 / 97.133	Review
`TkA01G472510`	`LXL04_002228`	`JCVI_TKOH_00035`	89.6	100.0 / 43.845	Complex
`TkA01G472810`	`LXL04_002227`	`JCVI_TKOH_00035`	99.3	99.022 / 75.701	Probable
`TkA01G473090`	`LXL04_002226`	`JCVI_TKOH_00035`	91.5	99.029 / 53.31	Complex
`TkA01G473370`	`LXL04_002224`	`JCVI_TKOH_00035`	96.3	100.0 / 99.153	Strict
`TkA01G473650`	`LXL04_002222`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G473660`	`LXL04_002221`	`JCVI_TKOH_00035`	99.5	100.0 / 100.0	Strict
`TkA01G474190`	`LXL04_002219`	`JCVI_TKOH_00035`	100.0	99.781 / 37.885	Review
`TkA01G474200`	`LXL04_002218`	`JCVI_TKOH_00035`	100.0	94.751 / 35.637	Review
`TkA01G474210`	`LXL04_002217`	`JCVI_TKOH_00035`	100.0	82.857 / 54.037	Review
`TkA01G474320`	`LXL04_002216`	`JCVI_TKOH_00035`	100.0	99.451 / 74.708	Probable
`TkA01G474330`	`LXL04_002216`	`JCVI_TKOH_00035`	100.0	100.0 / 14.983	Review
`TkA01G474350`	`LXL04_002213`	`JCVI_TKOH_00035`	98.6	96.703 / 33.911	Review
`TkA01G474370`	`LXL04_002213`	`JCVI_TKOH_00035`	100.0	96.703 / 33.911	Review
`TkA01G474380`	`LXL04_002213`	`JCVI_TKOH_00035`	90.2	100.0 / 54.817	Review
`TkA01G474400`	`LXL04_002213`	`JCVI_TKOH_00035`	100.0	96.703 / 33.911	Review
`TkA01G474410`	`LXL04_002211`	`JCVI_TKOH_00035`	99.2	100.0 / 100.0	Strict
`TkA01G474440`	`LXL04_002210`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Complex
`TkA01G474480`	`LXL04_002208`	`JCVI_TKOH_00035`	47.0	100.0 / 92.073	Review
`TkA01G474660`	`LXL04_002204`	`JCVI_TKOH_00035`	99.5	89.224 / 29.812	Review
`TkA01G474780`	`LXL04_002203`	`JCVI_TKOH_00035`	98.1	35.811 / 8.36	Complex
`TkA01G474790`	`LXL04_002203`	`JCVI_TKOH_00035`	100.0	100.0 / 23.344	Review
`TkA01G474810`	`LXL04_002202`	`JCVI_TKOH_00035`	100.0	68.485 / 81.295	Review
`TkA01G474860`	`LXL04_002196`	`JCVI_TKOH_00035`	98.6	100.0 / 66.882	Review
`TkA01G474980`	`LXL04_002195`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G475010`	`LXL04_002194`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G475130`	`LXL04_002191`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G475170`	`LXL04_002190`	`JCVI_TKOH_00035`	96.7	100.0 / 100.0	Complex
`TkA01G475480`	`LXL04_002187`	`JCVI_TKOH_00035`	99.4	100.0 / 100.0	Complex
`TkA01G475730`	`LXL04_002186`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G475750`	`LXL04_002185`	`JCVI_TKOH_00035`	99.6	92.439 / 97.055	Strict
`TkA01G476160`	`LXL04_002183`	`JCVI_TKOH_00035`	97.7	96.742 / 71.218	Probable
`TkA01G477020`	`LXL04_002177`	`JCVI_TKOH_00035`	90.9	100.0 / 100.0	Probable
`TkA01G477260`	`LXL04_002175`	`JCVI_TKOH_00035`	99.7	100.0 / 100.0	Strict
`TkA01G477450`	`LXL04_002173`	`JCVI_TKOH_00035`	87.4	100.0 / 44.966	Complex
`TkA01G477460`	`LXL04_002172`	`JCVI_TKOH_00035`	91.2	100.0 / 100.0	Probable
`TkA01G477480`	`LXL04_002171`	`JCVI_TKOH_00035`	83.1	100.0 / 100.0	Complex
`TkA01G477530`	`LXL04_002170`	`JCVI_TKOH_00035`	99.2	100.0 / 100.0	Complex
`TkA01G477590`	`LXL04_002168`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Complex
`TkA01G477600`	`LXL04_002167`	`JCVI_TKOH_00035`	99.6	100.0 / 100.0	Complex
`TkA01G477650`	`LXL04_002166`	`JCVI_TKOH_00035`	99.5	100.0 / 100.0	Complex
`TkA01G478100`	`LXL04_002165`	`JCVI_TKOH_00035`	98.3	100.0 / 100.0	Strict
`TkA01G478110`	`LXL04_002164`	`JCVI_TKOH_00035`	98.4	84.932 / 77.987	Probable
`TkA01G478120`	`LXL04_002163`	`JCVI_TKOH_00035`	98.2	100.0 / 57.292	Review
`TkA01G478150`	`LXL04_002161`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G478350`	`LXL04_002158`	`JCVI_TKOH_00035`	79.2	64.074 / 72.487	Review
`TkA01G478420`	`LXL04_002156`	`JCVI_TKOH_00035`	99.2	100.0 / 100.0	Review
`TkA01G478490`	`LXL04_002155`	`JCVI_TKOH_00035`	99.1	100.0 / 100.0	Strict
`TkA01G478520`	`LXL04_002154`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Complex
`TkA01G478770`	`LXL04_002150`	`JCVI_TKOH_00035`	99.8	86.913 / 100.0	Strict
`TkA01G478890`	`LXL04_002149`	`JCVI_TKOH_00035`	99.8	100.0 / 95.659	Complex
`TkA01G478910`	`LXL04_002147`	`JCVI_TKOH_00035`	96.1	100.0 / 91.441	Complex
`TkA01G479330`	`LXL04_002146`	`JCVI_TKOH_00035`	95.8	100.0 / 100.0	Strict
`TkA01G479470`	`LXL04_002143`	`JCVI_TKOH_00035`	97.9	100.0 / 100.0	Review
`TkA01G479490`	`LXL04_002142`	`JCVI_TKOH_00035`	96.6	99.801 / 99.016	Complex
`TkA01G479660`	`LXL04_002141`	`JCVI_TKOH_00035`	98.3	100.0 / 100.0	Strict
`TkA01G480200`	`LXL04_002138`	`JCVI_TKOH_00035`	100.0	98.621 / 66.822	Complex
`TkA01G480210`	`LXL04_002137`	`JCVI_TKOH_00035`	81.1	92.014 / 35.983	Complex
`TkA01G480580`	`LXL04_002133`	`JCVI_TKOH_00035`	93.2	100.0 / 95.814	Complex
`TkA01G480700`	`LXL04_002131`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Complex
`TkA01G481140`	`LXL04_002129`	`JCVI_TKOH_00035`	99.2	91.731 / 80.317	Strict
`TkA01G481190`	`LXL04_002128`	`JCVI_TKOH_00035`	99.4	100.0 / 100.0	Strict
`TkA01G481770`	`LXL04_002125`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G481780`	`LXL04_002123`	`JCVI_TKOH_00035`	95.2	100.0 / 100.0	Strict
`TkA01G482280`	`LXL04_002120`	`JCVI_TKOH_00035`	98.3	99.435 / 48.352	Review
`TkA01G482290`	`LXL04_002120`	`JCVI_TKOH_00035`	98.2	91.129 / 31.044	Review
`TkA01G482590`	`LXL04_002107`	`JCVI_TKOH_00035`	97.7	98.473 / 82.166	Review
`TkA01G482610`	`LXL04_002144`	`JCVI_TKOH_00035`	84.9	85.149 / 50.888	Complex
`TkA01G482740`	`LXL04_002106`	`JCVI_TKOH_00035`	98.7	97.375 / 100.0	Strict
`TkA01G482760`	`LXL04_002105`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G483340`	`LXL04_002103`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Complex
`TkA01G483430`	`LXL04_002101`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G483440`	`LXL04_002100`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G483450`	`LXL04_002099`	`JCVI_TKOH_00035`	99.4	89.971 / 100.0	Complex
`TkA01G483520`	`LXL04_002096`	`JCVI_TKOH_00035`	86.3	100.0 / 57.431	Complex
`TkA01G483580`	`LXL04_002096`	`JCVI_TKOH_00035`	99.5	99.074 / 39.266	Review
`TkA01G483600`	`LXL04_002096`	`JCVI_TKOH_00035`	100.0	100.0 / 57.431	Review
`TkA01G483610`	`LXL04_002095`	`JCVI_TKOH_00035`	98.3	100.0 / 100.0	Strict
`TkA01G483760`	`LXL04_002092`	`JCVI_TKOH_00035`	99.9	100.0 / 100.0	Complex
`TkA01G483770`	`LXL04_002091`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Complex
`TkA01G483780`	`LXL04_002090`	`JCVI_TKOH_00035`	99.4	99.816 / 100.0	Strict
`TkA01G483820`	`LXL04_002089`	`JCVI_TKOH_00035`	99.8	100.0 / 100.0	Strict
`TkA01G483840`	`LXL04_002088`	`JCVI_TKOH_00035`	99.6	100.0 / 100.0	Complex
`TkA01G484300`	`LXL04_002086`	`JCVI_TKOH_00035`	98.0	100.0 / 88.623	Strict
`TkA01G484410`	`LXL04_002085`	`JCVI_TKOH_00035`	99.9	100.0 / 100.0	Strict
`TkA01G484420`	`LXL04_002084`	`JCVI_TKOH_00035`	99.1	100.0 / 99.099	Strict
`TkA01G484430`	`LXL04_002083`	`JCVI_TKOH_00035`	98.1	94.595 / 41.502	Review
`TkA01G484480`	`LXL04_002079`	`JCVI_TKOH_00035`	99.2	97.957 / 92.357	Complex
`TkA01G484530`	`LXL04_002078`	`JCVI_TKOH_00035`	100.0	64.088 / 86.567	Complex
`TkA01G484650`	`LXL04_002075`	`JCVI_TKOH_00035`	99.9	96.121 / 85.453	Strict
`TkA01G484670`	`LXL04_002074`	`JCVI_TKOH_00035`	97.1	100.0 / 100.0	Strict
`TkA01G484910`	`LXL04_002071`	`JCVI_TKOH_00035`	99.6	100.0 / 100.0	Complex
`TkA01G485010`	`LXL04_002070`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G485020`	`LXL04_002069`	`JCVI_TKOH_00035`	98.9	77.686 / 43.721	Review
`TkA01G485030`	`LXL04_002068`	`JCVI_TKOH_00035`	99.8	100.0 / 100.0	Strict
`TkA01G485170`	`LXL04_002065`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G485190`	`LXL04_002064`	`JCVI_TKOH_00035`	98.3	100.0 / 85.836	Strict
`TkA01G485200`	`LXL04_002062`	`JCVI_TKOH_00035`	99.0	100.0 / 100.0	Complex
`TkA01G485210`	`LXL04_002061`	`JCVI_TKOH_00035`	99.6	100.0 / 100.0	Complex
`TkA01G485280`	`LXL04_002060`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G485350`	`LXL04_002059`	`JCVI_TKOH_00035`	99.7	100.0 / 100.0	Strict
`TkA01G485390`	`LXL04_002058`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G485400`	`LXL04_002057`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G485670`	`LXL04_002056`	`JCVI_TKOH_00035`	99.4	100.0 / 98.423	Strict
`TkA01G485730`	`LXL04_002054`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G486210`	`LXL04_002053`	`JCVI_TKOH_00035`	99.7	100.0 / 100.0	Complex
`TkA01G487410`	`LXL04_002048`	`JCVI_TKOH_00035`	85.8	100.0 / 100.0	Complex
`TkA01G488580`	`LXL04_002037`	`JCVI_TKOH_00035`	81.8	35.256 / 16.717	Complex
`TkA01G488610`	`LXL04_002038`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G488620`	`LXL04_002037`	`JCVI_TKOH_00035`	100.0	99.695 / 99.392	Complex
`TkA01G488640`	`LXL04_002036`	`JCVI_TKOH_00035`	99.7	100.0 / 100.0	Complex
`TkA01G488680`	`LXL04_002037`	`JCVI_TKOH_00035`	83.0	99.091 / 99.392	Complex
`TkA01G488790`	`LXL04_002035`	`JCVI_TKOH_00035`	98.8	71.053 / 46.023	Review
`TkA01G488990`	`LXL04_002033`	`JCVI_TKOH_00035`	98.6	100.0 / 88.889	Strict
`TkA01G489520`	`LXL04_002031`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G489610`	`LXL04_002029`	`JCVI_TKOH_00035`	99.4	100.0 / 100.0	Strict
`TkA01G489620`	`LXL04_002028`	`JCVI_TKOH_00035`	99.1	100.0 / 90.449	Strict
`TkA01G489720`	`LXL04_002026`	`JCVI_TKOH_00035`	93.9	75.0 / 99.754	Probable
`TkA01G489770`	`LXL04_002027`	`JCVI_TKOH_00035`	99.1	100.0 / 100.0	Strict
`TkA01G489840`	`LXL04_002025`	`JCVI_TKOH_00035`	97.1	100.0 / 95.775	Strict
`TkA01G489850`	`LXL04_002024`	`JCVI_TKOH_00035`	98.0	100.0 / 100.0	Strict
`TkA01G489870`	`LXL04_002023`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G490050`	`LXL04_002021`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Complex
`TkA01G490070`	`LXL04_002020`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Complex
`TkA01G490080`	`LXL04_002019`	`JCVI_TKOH_00035`	95.4	100.0 / 100.0	Complex
`TkA01G490150`	`LXL04_002018`	`JCVI_TKOH_00035`	98.9	100.0 / 100.0	Complex
`TkA01G490190`	`LXL04_002017`	`JCVI_TKOH_00035`	99.4	98.773 / 79.703	Probable
`TkA01G490230`	`LXL04_002016`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Complex
`TkA01G490350`	`LXL04_002014`	`JCVI_TKOH_00035`	99.5	100.0 / 100.0	Complex
`TkA01G490470`	`LXL04_002011`	`JCVI_TKOH_00035`	99.9	93.943 / 100.0	Complex
`TkA01G490480`	`LXL04_002010`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G490500`	`LXL04_002008`	`JCVI_TKOH_00035`	99.1	100.0 / 97.458	Strict
`TkA01G490510`	`LXL04_002009`	`JCVI_TKOH_00035`	99.7	100.0 / 100.0	Complex
`TkA01G490820`	`LXL04_002006`	`JCVI_TKOH_00035`	99.5	100.0 / 100.0	Complex
`TkA01G491720`	`LXL04_002005`	`JCVI_TKOH_00035`	97.7	100.0 / 51.55	Review
`TkA01G492140`	`LXL04_002004`	`JCVI_TKOH_00035`	97.4	100.0 / 100.0	Strict
`TkA01G492380`	`LXL04_002003`	`JCVI_TKOH_00035`	99.3	100.0 / 62.617	Review
`TkA01G492590`	`LXL04_002002`	`JCVI_TKOH_00035`	88.4	100.0 / 89.34	Review
`TkA01G492690`	`LXL04_002001`	`JCVI_TKOH_00035`	100.0	100.0 / 100.0	Strict
`TkA01G492840`	`LXL04_002000`	`JCVI_TKOH_00035`	100.0	100.0 / 88.596	Review