Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00022

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 99

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00022

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00022 Chr01 85613252-93562400 Chr01 74227807-82912094 mixed High 99 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00022`	Chr01:85613252-93562400	Chr01:74227807-82912094	mixed	99	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 99 · Showing 1–99 · Page 1/1

Download All Anchors TSV

TkA01G344610 → LXL04_003539

99.6%

TkA01G345360 → LXL04_003536

89.7%

TkA01G345960 → LXL04_003527

91.0%

TkA01G345970 → LXL04_003526

74.6%

TkA01G347390 → LXL04_003523

100.0%

TkA01G348420 → LXL04_003517

99.5%

TkA01G348480 → LXL04_003516

100.0%

TkA01G348570 → LXL04_003514

94.0%

TkA01G348810 → LXL04_003513

100.0%

TkA01G348870 → LXL04_003511

66.3%

TkA01G349440 → LXL04_003499

99.6%

TkA01G349490 → LXL04_003496

99.8%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA01G344610`	`LXL04_003539`	`JCVI_TKOH_00022`	99.6	100.0 / 100.0	Complex
`TkA01G345360`	`LXL04_003536`	`JCVI_TKOH_00022`	89.7	78.199 / 34.125	Complex
`TkA01G345960`	`LXL04_003527`	`JCVI_TKOH_00022`	91.0	99.805 / 25.184	Review
`TkA01G345970`	`LXL04_003526`	`JCVI_TKOH_00022`	74.6	100.0 / 56.46	Review
`TkA01G347390`	`LXL04_003523`	`JCVI_TKOH_00022`	100.0	100.0 / 100.0	Strict
`TkA01G348420`	`LXL04_003517`	`JCVI_TKOH_00022`	99.5	100.0 / 100.0	Strict
`TkA01G348480`	`LXL04_003516`	`JCVI_TKOH_00022`	100.0	100.0 / 100.0	Strict
`TkA01G348570`	`LXL04_003514`	`JCVI_TKOH_00022`	94.0	93.396 / 78.175	Probable
`TkA01G348810`	`LXL04_003513`	`JCVI_TKOH_00022`	100.0	100.0 / 48.56	Review
`TkA01G348870`	`LXL04_003511`	`JCVI_TKOH_00022`	66.3	74.242 / 14.126	Complex
`TkA01G349440`	`LXL04_003499`	`JCVI_TKOH_00022`	99.6	100.0 / 87.266	Review
`TkA01G349490`	`LXL04_003496`	`JCVI_TKOH_00022`	99.8	97.235 / 67.144	Review
`TkA01G349520`	`LXL04_003503`	`JCVI_TKOH_00022`	98.7	100.0 / 61.155	Complex
`TkA01G349530`	`LXL04_003497`	`JCVI_TKOH_00022`	98.3	100.0 / 97.521	Strict
`TkA01G349540`	`LXL04_003495`	`JCVI_TKOH_00022`	99.5	100.0 / 31.874	Review
`TkA01G349810`	`LXL04_003491`	`JCVI_TKOH_00022`	97.3	100.0 / 100.0	Strict
`TkA01G350960`	`LXL04_003475`	`JCVI_TKOH_00022`	100.0	100.0 / 100.0	Complex
`TkA01G352530`	`LXL04_003475`	`JCVI_TKOH_00022`	99.8	100.0 / 100.0	Complex
`TkA01G353190`	`LXL04_003480`	`JCVI_TKOH_00022`	96.6	98.71 / 97.303	Strict
`TkA01G353340`	`LXL04_003482`	`JCVI_TKOH_00022`	98.6	96.61 / 55.773	Review
`TkA01G353790`	`LXL04_003483`	`JCVI_TKOH_00022`	98.8	100.0 / 100.0	Complex
`TkA01G353840`	`LXL04_003483`	`JCVI_TKOH_00022`	100.0	100.0 / 26.285	Review
`TkA01G353920`	`LXL04_003483`	`JCVI_TKOH_00022`	98.3	100.0 / 70.751	Complex
`TkA01G354200`	`LXL04_003484`	`JCVI_TKOH_00022`	84.1	99.771 / 94.89	Complex
`TkA01G354390`	`LXL04_003485`	`JCVI_TKOH_00022`	99.6	100.0 / 100.0	Review
`TkA01G354420`	`LXL04_003487`	`JCVI_TKOH_00022`	100.0	100.0 / 100.0	Strict
`TkA01G355750`	`LXL04_003468`	`JCVI_TKOH_00022`	98.4	97.625 / 94.629	Strict
`TkA01G355850`	`LXL04_003467`	`JCVI_TKOH_00022`	99.0	100.0 / 100.0	Strict
`TkA01G355860`	`LXL04_003466`	`JCVI_TKOH_00022`	98.5	100.0 / 100.0	Strict
`TkA01G355910`	`LXL04_003465`	`JCVI_TKOH_00022`	96.9	99.233 / 91.304	Complex
`TkA01G356380`	`LXL04_003462`	`JCVI_TKOH_00022`	99.6	100.0 / 93.388	Strict
`TkA01G356570`	`LXL04_003460`	`JCVI_TKOH_00022`	100.0	100.0 / 100.0	Complex
`TkA01G356930`	`LXL04_003458`	`JCVI_TKOH_00022`	100.0	98.895 / 29.248	Review
`TkA01G357240`	`LXL04_003457`	`JCVI_TKOH_00022`	100.0	85.185 / 59.63	Review
`TkA01G357250`	`LXL04_003457`	`JCVI_TKOH_00022`	100.0	48.824 / 30.741	Complex
`TkA01G357360`	`LXL04_003456`	`JCVI_TKOH_00022`	100.0	100.0 / 100.0	Strict
`TkA01G357890`	`LXL04_003454`	`JCVI_TKOH_00022`	97.3	100.0 / 100.0	Strict
`TkA01G357930`	`LXL04_003452`	`JCVI_TKOH_00022`	71.9	94.398 / 92.409	Complex
`TkA01G358030`	`LXL04_003451`	`JCVI_TKOH_00022`	82.6	100.0 / 85.714	Review
`TkA01G358200`	`LXL04_003450`	`JCVI_TKOH_00022`	83.8	93.82 / 57.726	Complex
`TkA01G358330`	`LXL04_003449`	`JCVI_TKOH_00022`	99.7	100.0 / 100.0	Strict
`TkA01G358400`	`LXL04_003446`	`JCVI_TKOH_00022`	99.9	99.882 / 54.487	Review
`TkA01G359230`	`LXL04_003442`	`JCVI_TKOH_00022`	100.0	100.0 / 100.0	Complex
`TkA01G359480`	`LXL04_003441`	`JCVI_TKOH_00022`	99.6	100.0 / 100.0	Review
`TkA01G359490`	`LXL04_003440`	`JCVI_TKOH_00022`	100.0	100.0 / 100.0	Strict
`TkA01G359500`	`LXL04_003439`	`JCVI_TKOH_00022`	100.0	100.0 / 100.0	Strict
`TkA01G360810`	`LXL04_003429`	`JCVI_TKOH_00022`	98.0	97.408 / 65.014	Complex
`TkA01G360820`	`LXL04_003431`	`JCVI_TKOH_00022`	92.8	100.0 / 100.0	Probable
`TkA01G361000`	`LXL04_003452`	`JCVI_TKOH_00022`	71.7	94.398 / 92.409	Complex
`TkA01G361900`	`LXL04_003426`	`JCVI_TKOH_00022`	100.0	100.0 / 94.545	Strict
`TkA01G362920`	`LXL04_003416`	`JCVI_TKOH_00022`	94.2	100.0 / 100.0	Review
`TkA01G363140`	`LXL04_003413`	`JCVI_TKOH_00022`	87.6	100.0 / 93.548	Complex
`TkA01G363210`	`LXL04_003414`	`JCVI_TKOH_00022`	99.2	97.638 / 80.0	Strict
`TkA01G363310`	`LXL04_003412`	`JCVI_TKOH_00022`	99.6	100.0 / 100.0	Complex
`TkA01G363380`	`LXL04_003411`	`JCVI_TKOH_00022`	100.0	97.959 / 61.017	Complex
`TkA01G363460`	`LXL04_003410`	`JCVI_TKOH_00022`	99.6	100.0 / 100.0	Strict
`TkA01G363910`	`LXL04_003407`	`JCVI_TKOH_00022`	100.0	60.156 / 81.053	Review
`TkA01G364380`	`LXL04_003403`	`JCVI_TKOH_00022`	100.0	100.0 / 100.0	Review
`TkA01G364390`	`LXL04_003402`	`JCVI_TKOH_00022`	97.7	100.0 / 100.0	Complex
`TkA01G364910`	`LXL04_003394`	`JCVI_TKOH_00022`	94.6	92.079 / 69.403	Review
`TkA01G364920`	`LXL04_003393`	`JCVI_TKOH_00022`	99.4	100.0 / 100.0	Complex
`TkA01G365050`	`LXL04_003391`	`JCVI_TKOH_00022`	100.0	100.0 / 100.0	Strict
`TkA01G365090`	`LXL04_003390`	`JCVI_TKOH_00022`	99.8	100.0 / 100.0	Complex
`TkA01G366000`	`LXL04_003381`	`JCVI_TKOH_00022`	100.0	100.0 / 100.0	Complex
`TkA01G366030`	`LXL04_003380`	`JCVI_TKOH_00022`	96.4	100.0 / 100.0	Complex
`TkA01G366450`	`LXL04_003378`	`JCVI_TKOH_00022`	100.0	91.057 / 71.489	Probable
`TkA01G366540`	`LXL04_003377`	`JCVI_TKOH_00022`	99.8	100.0 / 100.0	Strict
`TkA01G366880`	`LXL04_003376`	`JCVI_TKOH_00022`	100.0	88.55 / 96.667	Review
`TkA01G366930`	`LXL04_003375`	`JCVI_TKOH_00022`	100.0	100.0 / 100.0	Strict
`TkA01G367140`	`LXL04_003374`	`JCVI_TKOH_00022`	98.7	96.774 / 34.803	Review
`TkA01G367160`	`LXL04_003374`	`JCVI_TKOH_00022`	100.0	98.148 / 24.594	Review
`TkA01G367510`	`LXL04_003371`	`JCVI_TKOH_00022`	62.0	83.099 / 55.779	Review
`TkA01G367880`	`LXL04_003369`	`JCVI_TKOH_00022`	97.3	98.678 / 99.55	Strict
`TkA01G367900`	`LXL04_003366`	`JCVI_TKOH_00022`	86.7	91.781 / 53.497	Review
`TkA01G368630`	`LXL04_003364`	`JCVI_TKOH_00022`	100.0	100.0 / 73.404	Probable
`TkA01G369060`	`LXL04_003362`	`JCVI_TKOH_00022`	99.0	100.0 / 100.0	Strict
`TkA01G369070`	`LXL04_003361`	`JCVI_TKOH_00022`	100.0	100.0 / 61.433	Complex
`TkA01G369110`	`LXL04_003360`	`JCVI_TKOH_00022`	100.0	73.554 / 96.739	Probable
`TkA01G369260`	`LXL04_003359`	`JCVI_TKOH_00022`	100.0	100.0 / 100.0	Strict
`TkA01G369270`	`LXL04_003358`	`JCVI_TKOH_00022`	92.5	98.556 / 97.517	Complex
`TkA01G369350`	`LXL04_003356`	`JCVI_TKOH_00022`	82.9	100.0 / 59.304	Complex
`TkA01G369720`	`LXL04_003356`	`JCVI_TKOH_00022`	87.5	87.709 / 27.265	Complex
`TkA01G370420`	`LXL04_003351`	`JCVI_TKOH_00022`	94.0	99.822 / 91.095	Complex
`TkA01G370660`	`LXL04_003350`	`JCVI_TKOH_00022`	90.6	100.0 / 75.14	Complex
`TkA01G370870`	`LXL04_003348`	`JCVI_TKOH_00022`	100.0	89.831 / 8.696	Review
`TkA01G370880`	`LXL04_003348`	`JCVI_TKOH_00022`	99.0	100.0 / 56.03	Review
`TkA01G371130`	`LXL04_003344`	`JCVI_TKOH_00022`	100.0	93.578 / 24.446	Review
`TkA01G371920`	`LXL04_003340`	`JCVI_TKOH_00022`	98.9	100.0 / 74.468	Probable
`TkA01G371950`	`LXL04_003339`	`JCVI_TKOH_00022`	95.3	100.0 / 100.0	Strict
`TkA01G372060`	`LXL04_003336`	`JCVI_TKOH_00022`	99.6	100.0 / 100.0	Strict
`TkA01G372300`	`LXL04_003335`	`JCVI_TKOH_00022`	100.0	100.0 / 100.0	Strict
`TkA01G373200`	`LXL04_003329`	`JCVI_TKOH_00022`	98.7	100.0 / 100.0	Strict
`TkA01G373450`	`LXL04_003327`	`JCVI_TKOH_00022`	93.4	100.0 / 100.0	Probable
`TkA01G374450`	`LXL04_003322`	`JCVI_TKOH_00022`	47.0	79.286 / 69.851	Review
`TkA01G374570`	`LXL04_003321`	`JCVI_TKOH_00022`	84.3	100.0 / 100.0	Review
`TkA01G374580`	`LXL04_003320`	`JCVI_TKOH_00022`	99.6	100.0 / 100.0	Strict
`TkA01G374830`	`LXL04_003319`	`JCVI_TKOH_00022`	75.9	97.391 / 30.518	Complex
`TkA01G374960`	`LXL04_003319`	`JCVI_TKOH_00022`	71.6	79.412 / 21.798	Complex
`TkA01G375050`	`LXL04_003316`	`JCVI_TKOH_00022`	99.4	100.0 / 100.0	Strict