同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00375
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 27
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00375

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00375 ChrUn 12220301-12490279 Chr01 23205942-23587806 mixed High 27 anchors
ChrUn 12220301-12490279 Chr01 23205942-23587806 JCVI_TKOH_00375 · 27 gene pairs TkAUNG044020 | LXL04_001270 | 95.2% | RBH_high_identity_coverage_synteny | Strict TkAUNG044050 | LXL04_001271 | 95.4% | multi_source_to_OH1004 | Complex TkAUNG044060 | LXL04_001272 | 98.2% | multi_source_to_OH1004 | Complex TkAUNG044070 | LXL04_001273 | 99.4% | multi_source_to_OH1004 | Complex TkAUNG044100 | LXL04_001274 | 100.0% | multi_source_to_OH1004 | Complex TkAUNG044110 | LXL04_001277 | 97.9% | multi_source_to_OH1004 | Complex TkAUNG044120 | LXL04_001278 | 97.2% | multi_source_to_OH1004 | Complex TkAUNG044130 | LXL04_001279 | 99.5% | multi_source_to_OH1004 | Complex TkAUNG044230 | LXL04_001264 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkAUNG044320 | LXL04_001267 | 98.2% | multi_source_to_OH1004 | Complex TkAUNG044330 | LXL04_001269 | 81.2% | multi_source_to_OH1004 | Complex TkAUNG044520 | LXL04_001271 | 94.9% | multi_source_to_OH1004 | Complex
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00375 ChrUn:12220301-12490279 Chr01:23205942-23587806 mixed 27 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 27 · 当前范围 1–27 · 页码 1/1

TkAUNG044020 → LXL04_001270
95.2%
TkAUNG044050 → LXL04_001271
95.4%
TkAUNG044060 → LXL04_001272
98.2%
TkAUNG044070 → LXL04_001273
99.4%
TkAUNG044100 → LXL04_001274
100.0%
TkAUNG044110 → LXL04_001277
97.9%
TkAUNG044120 → LXL04_001278
97.2%
TkAUNG044130 → LXL04_001279
99.5%
TkAUNG044230 → LXL04_001264
100.0%
TkAUNG044320 → LXL04_001267
98.2%
TkAUNG044330 → LXL04_001269
81.2%
TkAUNG044520 → LXL04_001271
94.9%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkAUNG044020LXL04_001270JCVI_TKOH_0037595.2100.0 / 100.0Strict
TkAUNG044050LXL04_001271JCVI_TKOH_0037595.4100.0 / 94.163Complex
TkAUNG044060LXL04_001272JCVI_TKOH_0037598.295.62 / 89.318Complex
TkAUNG044070LXL04_001273JCVI_TKOH_0037599.494.891 / 99.426Complex
TkAUNG044100LXL04_001274JCVI_TKOH_00375100.0100.0 / 100.0Complex
TkAUNG044110LXL04_001277JCVI_TKOH_0037597.9100.0 / 100.0Complex
TkAUNG044120LXL04_001278JCVI_TKOH_0037597.2100.0 / 100.0Complex
TkAUNG044130LXL04_001279JCVI_TKOH_0037599.595.455 / 67.5Complex
TkAUNG044230LXL04_001264JCVI_TKOH_00375100.0100.0 / 18.122待复核
TkAUNG044320LXL04_001267JCVI_TKOH_0037598.293.204 / 75.74Complex
TkAUNG044330LXL04_001269JCVI_TKOH_0037581.298.916 / 86.447Complex
TkAUNG044520LXL04_001271JCVI_TKOH_0037594.9100.0 / 94.163Complex
TkAUNG044530LXL04_001272JCVI_TKOH_0037599.095.62 / 89.318Complex
TkAUNG044540LXL04_001273JCVI_TKOH_0037596.294.891 / 99.426Complex
TkAUNG044580LXL04_001274JCVI_TKOH_00375100.0100.0 / 100.0Complex
TkAUNG044610LXL04_001277JCVI_TKOH_0037599.2100.0 / 100.0Complex
TkAUNG044620LXL04_001278JCVI_TKOH_0037599.6100.0 / 100.0Complex
TkAUNG044740LXL04_001279JCVI_TKOH_00375100.0100.0 / 100.0Complex
TkAUNG044750LXL04_001280JCVI_TKOH_0037591.0100.0 / 100.0Complex
TkAUNG044780LXL04_001281JCVI_TKOH_0037596.390.532 / 89.958Complex
TkAUNG044810LXL04_001283JCVI_TKOH_00375100.0100.0 / 80.42Strict
TkAUNG044830LXL04_001284JCVI_TKOH_00375100.0100.0 / 100.0Complex
TkAUNG044840LXL04_001285JCVI_TKOH_00375100.0100.0 / 100.0Complex
TkAUNG044850LXL04_001286JCVI_TKOH_0037599.2100.0 / 100.0Complex
TkAUNG044880LXL04_001287JCVI_TKOH_0037596.7100.0 / 99.18待复核
TkAUNG044890LXL04_001288JCVI_TKOH_0037593.7100.0 / 100.0Complex
TkAUNG044910LXL04_001293JCVI_TKOH_0037598.6100.0 / 27.238待复核