同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00273
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 82
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00273

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00273 Chr06 40446935-45525359 Chr05 82127828-87294665 mixed High 82 anchors
Chr06 40446935-45525359 Chr05 82127828-87294665 JCVI_TKOH_00273 · 82 gene pairs TkA06G155190 | LXL04_024318 | 100.0% | multi_candidate_from_TK1151 | Complex TkA06G155220 | LXL04_024317 | 98.9% | sequence_supported_annotation_or_model_conflict | Review TkA06G155750 | LXL04_024299 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA06G155850 | LXL04_024297 | 99.8% | RBH_high_identity_coverage_synteny | Strict TkA06G155940 | LXL04_024294 | 98.7% | multi_source_to_OH1004 | Complex TkA06G155950 | LXL04_024293 | 96.5% | RBH_high_identity_coverage_synteny | Strict TkA06G156010 | LXL04_024294 | 88.6% | multi_source_to_OH1004 | Complex TkA06G156110 | LXL04_024290 | 71.1% | multi_source_to_OH1004 | Complex TkA06G156260 | LXL04_024290 | 98.8% | multi_source_to_OH1004 | Complex TkA06G156500 | LXL04_024288 | 92.8% | non_reciprocal_best_hit | Complex TkA06G156580 | LXL04_024288 | 80.3% | non_reciprocal_best_hit | Complex TkA06G156720 | LXL04_024288 | 97.0% | sequence_supported_annotation_or_model_conflict | Review
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00273 Chr06:40446935-45525359 Chr05:82127828-87294665 mixed 82 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 82 · 当前范围 1–82 · 页码 1/1

TkA06G155190 → LXL04_024318
100.0%
TkA06G155220 → LXL04_024317
98.9%
TkA06G155750 → LXL04_024299
100.0%
TkA06G155850 → LXL04_024297
99.8%
TkA06G155940 → LXL04_024294
98.7%
TkA06G155950 → LXL04_024293
96.5%
TkA06G156010 → LXL04_024294
88.6%
TkA06G156110 → LXL04_024290
71.1%
TkA06G156260 → LXL04_024290
98.8%
TkA06G156500 → LXL04_024288
92.8%
TkA06G156580 → LXL04_024288
80.3%
TkA06G156720 → LXL04_024288
97.0%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA06G155190LXL04_024318JCVI_TKOH_00273100.095.946 / 68.269Complex
TkA06G155220LXL04_024317JCVI_TKOH_0027398.986.275 / 53.012待复核
TkA06G155750LXL04_024299JCVI_TKOH_00273100.0100.0 / 100.0Strict
TkA06G155850LXL04_024297JCVI_TKOH_0027399.8100.0 / 100.0Strict
TkA06G155940LXL04_024294JCVI_TKOH_0027398.790.669 / 68.14Complex
TkA06G155950LXL04_024293JCVI_TKOH_0027396.594.475 / 81.043Strict
TkA06G156010LXL04_024294JCVI_TKOH_0027388.690.467 / 67.988Complex
TkA06G156110LXL04_024290JCVI_TKOH_0027371.196.032 / 23.379Complex
TkA06G156260LXL04_024290JCVI_TKOH_0027398.8100.0 / 97.053Complex
TkA06G156500LXL04_024288JCVI_TKOH_0027392.872.674 / 8.897Complex
TkA06G156580LXL04_024288JCVI_TKOH_0027380.384.076 / 9.324Complex
TkA06G156720LXL04_024288JCVI_TKOH_0027397.094.836 / 14.306待复核
TkA06G156730LXL04_024287JCVI_TKOH_0027387.5100.0 / 100.0待复核
TkA06G157260LXL04_024283JCVI_TKOH_0027393.7100.0 / 89.783Probable
TkA06G157290LXL04_024282JCVI_TKOH_00273100.0100.0 / 100.0Strict
TkA06G157310LXL04_024281JCVI_TKOH_00273100.0100.0 / 100.0Strict
TkA06G157420LXL04_024275JCVI_TKOH_0027399.682.686 / 82.394Strict
TkA06G157480LXL04_024273JCVI_TKOH_0027388.099.722 / 98.28待复核
TkA06G157500LXL04_024272JCVI_TKOH_0027397.599.721 / 12.049待复核
TkA06G157570LXL04_024270JCVI_TKOH_0027391.788.889 / 30.508Complex
TkA06G157580LXL04_024269JCVI_TKOH_00273100.0100.0 / 63.158待复核
TkA06G157600LXL04_024268JCVI_TKOH_00273100.086.364 / 60.127Complex
TkA06G157670LXL04_024266JCVI_TKOH_0027393.099.76 / 70.57Probable
TkA06G157770LXL04_024265JCVI_TKOH_0027398.7100.0 / 81.026Strict
TkA06G158180LXL04_024261JCVI_TKOH_00273100.0100.0 / 100.0Strict
TkA06G158250LXL04_024260JCVI_TKOH_0027398.7100.0 / 100.0Strict
TkA06G158430LXL04_024259JCVI_TKOH_0027399.2100.0 / 70.833Complex
TkA06G159590LXL04_024256JCVI_TKOH_0027399.2100.0 / 100.0Strict
TkA06G159790LXL04_024252JCVI_TKOH_0027390.4100.0 / 100.0Probable
TkA06G159860LXL04_024249JCVI_TKOH_0027394.287.05 / 100.0Probable
TkA06G159870LXL04_024248JCVI_TKOH_0027355.8100.0 / 38.992Complex
TkA06G160250LXL04_024242JCVI_TKOH_0027399.5100.0 / 100.0Complex
TkA06G160640LXL04_024238JCVI_TKOH_0027396.0100.0 / 57.566待复核
TkA06G160840LXL04_024237JCVI_TKOH_0027398.6100.0 / 100.0Complex
TkA06G160980LXL04_024235JCVI_TKOH_0027398.883.729 / 57.176Complex
TkA06G161180LXL04_024234JCVI_TKOH_0027398.5100.0 / 55.765待复核
TkA06G162190LXL04_024232JCVI_TKOH_0027399.1100.0 / 100.0Strict
TkA06G162390LXL04_024231JCVI_TKOH_0027382.856.311 / 82.734待复核
TkA06G162510LXL04_024229JCVI_TKOH_0027397.4100.0 / 100.0Strict
TkA06G162610LXL04_024227JCVI_TKOH_0027399.299.721 / 100.0Strict
TkA06G163020LXL04_024224JCVI_TKOH_0027397.275.0 / 27.786Complex
TkA06G164190LXL04_024219JCVI_TKOH_0027395.3100.0 / 100.0Strict
TkA06G164260LXL04_024218JCVI_TKOH_0027392.6100.0 / 93.085Complex
TkA06G164320LXL04_024217JCVI_TKOH_0027399.396.083 / 98.588Strict
TkA06G164380LXL04_024215JCVI_TKOH_0027389.2100.0 / 100.0待复核
TkA06G164390LXL04_024214JCVI_TKOH_0027398.397.294 / 84.192Complex
TkA06G164430LXL04_024213JCVI_TKOH_0027398.776.744 / 61.6待复核
TkA06G164520LXL04_024210JCVI_TKOH_0027399.5100.0 / 100.0Strict
TkA06G164680LXL04_024206JCVI_TKOH_0027399.8100.0 / 100.0Complex
TkA06G164760LXL04_024204JCVI_TKOH_0027387.3100.0 / 79.577待复核
TkA06G164940LXL04_024202JCVI_TKOH_00273100.0100.0 / 100.0Strict
TkA06G165010LXL04_024201JCVI_TKOH_00273100.0100.0 / 100.0Strict
TkA06G165020LXL04_024200JCVI_TKOH_0027399.893.769 / 72.079Probable
TkA06G165160LXL04_024199JCVI_TKOH_00273100.0100.0 / 100.0Complex
TkA06G165250LXL04_024198JCVI_TKOH_00273100.0100.0 / 64.356Complex
TkA06G165450LXL04_024197JCVI_TKOH_0027399.8100.0 / 94.421Strict
TkA06G168190LXL04_024185JCVI_TKOH_0027398.399.512 / 91.892Complex
TkA06G168400LXL04_024184JCVI_TKOH_00273100.0100.0 / 100.0Complex
TkA06G168550LXL04_024183JCVI_TKOH_00273100.0100.0 / 100.0Strict
TkA06G168560LXL04_024182JCVI_TKOH_0027393.9100.0 / 100.0Complex
TkA06G168690LXL04_024180JCVI_TKOH_0027394.897.436 / 58.41待复核
TkA06G169210LXL04_024178JCVI_TKOH_0027394.1100.0 / 100.0Probable
TkA06G169790LXL04_024177JCVI_TKOH_00273100.098.984 / 92.235Strict
TkA06G170620LXL04_024170JCVI_TKOH_00273100.0100.0 / 100.0Strict
TkA06G170640LXL04_024169JCVI_TKOH_0027395.8100.0 / 78.485Probable
TkA06G170650LXL04_024169JCVI_TKOH_0027399.093.204 / 14.545待复核
TkA06G170660LXL04_024168JCVI_TKOH_0027379.782.192 / 50.685Complex
TkA06G170850LXL04_024165JCVI_TKOH_0027396.4100.0 / 93.836Complex
TkA06G170990LXL04_024166JCVI_TKOH_0027390.499.455 / 66.85Complex
TkA06G171040LXL04_024160JCVI_TKOH_0027397.694.781 / 98.696Strict
TkA06G171300LXL04_024157JCVI_TKOH_0027399.4100.0 / 100.0Strict
TkA06G171430LXL04_024154JCVI_TKOH_0027398.9100.0 / 100.0待复核
TkA06G171880LXL04_024152JCVI_TKOH_0027399.3100.0 / 89.32待复核
TkA06G172170LXL04_024151JCVI_TKOH_0027390.656.667 / 52.564待复核
TkA06G172590LXL04_024148JCVI_TKOH_0027398.9100.0 / 100.0Strict
TkA06G172610LXL04_024146JCVI_TKOH_0027396.667.939 / 50.568待复核
TkA06G172830LXL04_024144JCVI_TKOH_0027398.899.789 / 99.579Strict
TkA06G172880LXL04_024142JCVI_TKOH_0027396.2100.0 / 100.0Strict
TkA06G173210LXL04_024138JCVI_TKOH_0027387.7100.0 / 100.0Complex
TkA06G173270LXL04_024138JCVI_TKOH_0027369.699.054 / 77.941Complex
TkA06G173280LXL04_024138JCVI_TKOH_0027359.595.627 / 81.373Complex
TkA06G173400LXL04_024137JCVI_TKOH_0027388.493.665 / 69.97待复核