同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00189
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 665
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00189

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00189 Chr04 34940-17190201 Chr08 37803145-54014168 mixed High 65 anchors
Chr04 34940-17190201 Chr08 37803145-54014168 JCVI_TKOH_00189 · 665 gene pairs TkA04G058460 | LXL04_036281 | 84.4% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA04G058490 | LXL04_036279 | 96.2% | sequence_supported_annotation_or_model_conflict | Review TkA04G058500 | LXL04_036278 | 81.5% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA04G058510 | LXL04_036278 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA04G058580 | LXL04_036275 | 100.0% | non_reciprocal_best_hit | Complex TkA04G058600 | LXL04_036273 | 97.2% | RBH_high_identity_coverage_synteny | Strict TkA04G058750 | LXL04_036272 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA04G058810 | LXL04_036271 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA04G058910 | LXL04_036270 | 100.0% | multi_source_to_OH1004 | Complex TkA04G058920 | LXL04_036269 | 100.0% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA04G058970 | LXL04_036268 | 100.0% | multi_source_to_OH1004 | Complex TkA04G058990 | LXL04_036267 | 100.0% | multi_source_to_OH1004 | Complex
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00189 Chr04:34940-17190201 Chr08:37803145-54014168 mixed 665 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 665 · 当前范围 601–665 · 页码 4/4

TkA04G058460 → LXL04_036281
84.4%
TkA04G058490 → LXL04_036279
96.2%
TkA04G058500 → LXL04_036278
81.5%
TkA04G058510 → LXL04_036278
100.0%
TkA04G058580 → LXL04_036275
100.0%
TkA04G058600 → LXL04_036273
97.2%
TkA04G058750 → LXL04_036272
100.0%
TkA04G058810 → LXL04_036271
100.0%
TkA04G058910 → LXL04_036270
100.0%
TkA04G058920 → LXL04_036269
100.0%
TkA04G058970 → LXL04_036268
100.0%
TkA04G058990 → LXL04_036267
100.0%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA04G058460LXL04_036281JCVI_TKOH_0018984.4100.0 / 100.0待复核
TkA04G058490LXL04_036279JCVI_TKOH_0018996.296.324 / 37.861待复核
TkA04G058500LXL04_036278JCVI_TKOH_0018981.590.476 / 43.869待复核
TkA04G058510LXL04_036278JCVI_TKOH_00189100.097.283 / 24.387待复核
TkA04G058580LXL04_036275JCVI_TKOH_00189100.093.249 / 60.218Complex
TkA04G058600LXL04_036273JCVI_TKOH_0018997.298.722 / 99.528Strict
TkA04G058750LXL04_036272JCVI_TKOH_00189100.0100.0 / 53.363待复核
TkA04G058810LXL04_036271JCVI_TKOH_00189100.0100.0 / 100.0Strict
TkA04G058910LXL04_036270JCVI_TKOH_00189100.0100.0 / 100.0Complex
TkA04G058920LXL04_036269JCVI_TKOH_00189100.0100.0 / 100.0待复核
TkA04G058970LXL04_036268JCVI_TKOH_00189100.0100.0 / 95.376Complex
TkA04G058990LXL04_036267JCVI_TKOH_00189100.0100.0 / 100.0Complex
TkA04G059060LXL04_036266JCVI_TKOH_0018999.5100.0 / 100.0Strict
TkA04G059090LXL04_036265JCVI_TKOH_0018999.2100.0 / 100.0Strict
TkA04G059230LXL04_036264JCVI_TKOH_0018999.399.218 / 85.385Complex
TkA04G059290LXL04_036263JCVI_TKOH_0018998.1100.0 / 99.301待复核
TkA04G059440LXL04_036264JCVI_TKOH_0018991.4100.0 / 92.981Complex
TkA04G059870LXL04_036261JCVI_TKOH_0018982.749.324 / 47.468待复核
TkA04G059910LXL04_036259JCVI_TKOH_0018972.225.786 / 3.173Complex
TkA04G059930LXL04_036255JCVI_TKOH_0018995.9100.0 / 17.656待复核
TkA04G060020LXL04_036255JCVI_TKOH_0018993.690.38 / 25.832Complex
TkA04G060030LXL04_036255JCVI_TKOH_0018995.284.146 / 14.978Complex
TkA04G060040LXL04_036255JCVI_TKOH_0018988.646.528 / 5.065Complex
TkA04G060060LXL04_036255JCVI_TKOH_0018954.5100.0 / 28.148Complex
TkA04G060070LXL04_036258JCVI_TKOH_0018998.8100.0 / 84.488Strict
TkA04G060100LXL04_036257JCVI_TKOH_0018999.0100.0 / 100.0Strict
TkA04G060140LXL04_036256JCVI_TKOH_0018999.9100.0 / 100.0Strict
TkA04G060150LXL04_036255JCVI_TKOH_0018999.9100.0 / 100.0Strict
TkA04G060350LXL04_036254JCVI_TKOH_0018998.549.635 / 13.793Complex
TkA04G060590LXL04_036251JCVI_TKOH_0018998.6100.0 / 100.0Strict
TkA04G060630LXL04_036249JCVI_TKOH_0018988.796.341 / 21.92Complex
TkA04G060700LXL04_036248JCVI_TKOH_0018999.5100.0 / 95.025Strict
TkA04G060720LXL04_036247JCVI_TKOH_0018995.5100.0 / 100.0Strict
TkA04G060760LXL04_036246JCVI_TKOH_0018997.4100.0 / 85.459Strict
TkA04G060810LXL04_036245JCVI_TKOH_0018994.3100.0 / 55.336待复核
TkA04G060900LXL04_036245JCVI_TKOH_0018994.286.559 / 33.794Complex
TkA04G061060LXL04_036244JCVI_TKOH_0018995.8100.0 / 100.0Strict
TkA04G061390LXL04_036243JCVI_TKOH_0018996.1100.0 / 100.0Complex
TkA04G061440LXL04_036241JCVI_TKOH_0018999.492.139 / 100.0Complex
TkA04G061700LXL04_036239JCVI_TKOH_00189100.0100.0 / 100.0待复核
TkA04G061720LXL04_036238JCVI_TKOH_0018997.6100.0 / 95.807Strict
TkA04G062140LXL04_036235JCVI_TKOH_0018999.893.663 / 100.0Strict
TkA04G062300LXL04_036233JCVI_TKOH_0018999.8100.0 / 98.469Strict
TkA04G062310LXL04_036232JCVI_TKOH_00189100.0100.0 / 100.0Complex
TkA04G062330LXL04_036230JCVI_TKOH_0018999.8100.0 / 100.0Strict
TkA04G062410LXL04_036227JCVI_TKOH_0018998.6100.0 / 100.0Strict
TkA04G062430LXL04_036226JCVI_TKOH_0018999.2100.0 / 100.0Strict
TkA04G062450LXL04_036224JCVI_TKOH_0018999.5100.0 / 100.0Strict
TkA04G062460LXL04_036223JCVI_TKOH_0018999.6100.0 / 100.0Strict
TkA04G062520LXL04_036222JCVI_TKOH_00189100.0100.0 / 100.0待复核
TkA04G062590LXL04_036221JCVI_TKOH_0018995.994.6 / 90.603Strict
TkA04G062610LXL04_036220JCVI_TKOH_0018999.7100.0 / 100.0Complex
TkA04G062820LXL04_036219JCVI_TKOH_0018999.8100.0 / 100.0Complex
TkA04G062850LXL04_036218JCVI_TKOH_00189100.0100.0 / 100.0Complex
TkA04G063150LXL04_036214JCVI_TKOH_0018998.4100.0 / 100.0Strict
TkA04G063180LXL04_036213JCVI_TKOH_0018995.077.966 / 88.219Probable
TkA04G063190LXL04_036211JCVI_TKOH_00189100.076.073 / 100.0Probable
TkA04G063200LXL04_036210JCVI_TKOH_00189100.0100.0 / 100.0Strict
TkA04G063210LXL04_036208JCVI_TKOH_00189100.0100.0 / 100.0待复核
TkA04G063670LXL04_036206JCVI_TKOH_0018995.4100.0 / 83.582Strict
TkA04G064350LXL04_036202JCVI_TKOH_0018995.6100.0 / 100.0Strict
TkA04G064370LXL04_036200JCVI_TKOH_0018999.3100.0 / 98.482Strict
TkA04G064380LXL04_036199JCVI_TKOH_0018999.6100.0 / 100.0Strict
TkA04G064390LXL04_036198JCVI_TKOH_0018998.3100.0 / 100.0Strict
TkA04G064520LXL04_036197JCVI_TKOH_0018999.6100.0 / 100.0Complex