Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00363

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 86

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00363

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00363 Chr08 104609737-111133035 Chr07 110016384-116710605 mixed High 86 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00363`	Chr08:104609737-111133035	Chr07:110016384-116710605	mixed	86	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 86 · Showing 1–86 · Page 1/1

Download All Anchors TSV

TkA08G410920 → LXL04_034602

99.0%

TkA08G412680 → LXL04_034609

99.8%

TkA08G412690 → LXL04_034610

99.8%

TkA08G412730 → LXL04_034611

98.4%

TkA08G413110 → LXL04_034614

99.7%

TkA08G413180 → LXL04_034616

99.8%

TkA08G413280 → LXL04_034619

96.5%

TkA08G413530 → LXL04_034623

65.8%

TkA08G413830 → LXL04_034625

99.3%

TkA08G414430 → LXL04_034631

97.2%

TkA08G414490 → LXL04_034632

85.8%

TkA08G414670 → LXL04_034634

99.0%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA08G410920`	`LXL04_034602`	`JCVI_TKOH_00363`	99.0	100.0 / 67.427	Complex
`TkA08G412680`	`LXL04_034609`	`JCVI_TKOH_00363`	99.8	96.081 / 87.351	Strict
`TkA08G412690`	`LXL04_034610`	`JCVI_TKOH_00363`	99.8	100.0 / 100.0	Strict
`TkA08G412730`	`LXL04_034611`	`JCVI_TKOH_00363`	98.4	90.057 / 100.0	Strict
`TkA08G413110`	`LXL04_034614`	`JCVI_TKOH_00363`	99.7	100.0 / 81.302	Complex
`TkA08G413180`	`LXL04_034616`	`JCVI_TKOH_00363`	99.8	99.482 / 53.235	Review
`TkA08G413280`	`LXL04_034619`	`JCVI_TKOH_00363`	96.5	100.0 / 100.0	Strict
`TkA08G413530`	`LXL04_034623`	`JCVI_TKOH_00363`	65.8	88.235 / 44.656	Complex
`TkA08G413830`	`LXL04_034625`	`JCVI_TKOH_00363`	99.3	100.0 / 100.0	Strict
`TkA08G414430`	`LXL04_034631`	`JCVI_TKOH_00363`	97.2	95.946 / 83.041	Strict
`TkA08G414490`	`LXL04_034632`	`JCVI_TKOH_00363`	85.8	100.0 / 100.0	Review
`TkA08G414670`	`LXL04_034634`	`JCVI_TKOH_00363`	99.0	26.216 / 34.035	Complex
`TkA08G414820`	`LXL04_034635`	`JCVI_TKOH_00363`	81.8	100.0 / 98.786	Complex
`TkA08G414930`	`LXL04_034635`	`JCVI_TKOH_00363`	48.8	46.454 / 91.351	Complex
`TkA08G415040`	`LXL04_034694`	`JCVI_TKOH_00363`	99.7	100.0 / 98.052	Strict
`TkA08G415570`	`LXL04_034635`	`JCVI_TKOH_00363`	91.9	94.872 / 22.458	Complex
`TkA08G415580`	`LXL04_034635`	`JCVI_TKOH_00363`	88.8	97.436 / 40.668	Complex
`TkA08G415710`	`LXL04_034635`	`JCVI_TKOH_00363`	97.4	100.0 / 100.0	Complex
`TkA08G416510`	`LXL04_034636`	`JCVI_TKOH_00363`	96.1	100.0 / 96.451	Strict
`TkA08G417410`	`LXL04_034649`	`JCVI_TKOH_00363`	93.6	87.715 / 100.0	Complex
`TkA08G417840`	`LXL04_034653`	`JCVI_TKOH_00363`	99.1	100.0 / 100.0	Strict
`TkA08G420050`	`LXL04_034664`	`JCVI_TKOH_00363`	97.5	100.0 / 93.997	Complex
`TkA08G420070`	`LXL04_034665`	`JCVI_TKOH_00363`	96.5	100.0 / 74.727	Complex
`TkA08G420100`	`LXL04_034665`	`JCVI_TKOH_00363`	98.9	95.104 / 100.0	Review
`TkA08G420460`	`LXL04_034669`	`JCVI_TKOH_00363`	98.4	100.0 / 26.934	Review
`TkA08G420500`	`LXL04_034665`	`JCVI_TKOH_00363`	96.5	100.0 / 88.144	Complex
`TkA08G420800`	`LXL04_034676`	`JCVI_TKOH_00363`	100.0	100.0 / 100.0	Complex
`TkA08G422350`	`LXL04_034681`	`JCVI_TKOH_00363`	95.4	100.0 / 100.0	Review
`TkA08G422740`	`LXL04_034681`	`JCVI_TKOH_00363`	93.7	100.0 / 100.0	Complex
`TkA08G423420`	`LXL04_034684`	`JCVI_TKOH_00363`	100.0	100.0 / 100.0	Strict
`TkA08G423590`	`LXL04_034687`	`JCVI_TKOH_00363`	99.5	100.0 / 96.107	Complex
`TkA08G423830`	`LXL04_034689`	`JCVI_TKOH_00363`	100.0	100.0 / 100.0	Complex
`TkA08G424060`	`LXL04_034689`	`JCVI_TKOH_00363`	100.0	100.0 / 100.0	Complex
`TkA08G424330`	`LXL04_034695`	`JCVI_TKOH_00363`	100.0	100.0 / 100.0	Strict
`TkA08G424340`	`LXL04_034696`	`JCVI_TKOH_00363`	99.3	100.0 / 32.697	Review
`TkA08G425870`	`LXL04_034702`	`JCVI_TKOH_00363`	95.7	100.0 / 80.0	Probable
`TkA08G426430`	`LXL04_034704`	`JCVI_TKOH_00363`	98.2	100.0 / 100.0	Strict
`TkA08G426440`	`LXL04_034705`	`JCVI_TKOH_00363`	92.0	85.43 / 78.338	Probable
`TkA08G426670`	`LXL04_034709`	`JCVI_TKOH_00363`	99.5	100.0 / 86.929	Strict
`TkA08G426680`	`LXL04_034710`	`JCVI_TKOH_00363`	97.1	100.0 / 100.0	Complex
`TkA08G428530`	`LXL04_034711`	`JCVI_TKOH_00363`	98.2	100.0 / 100.0	Strict
`TkA08G428650`	`LXL04_034712`	`JCVI_TKOH_00363`	99.5	100.0 / 100.0	Complex
`TkA08G428950`	`LXL04_034718`	`JCVI_TKOH_00363`	100.0	100.0 / 100.0	Strict
`TkA08G429040`	`LXL04_034719`	`JCVI_TKOH_00363`	100.0	85.634 / 80.211	Complex
`TkA08G429510`	`LXL04_034721`	`JCVI_TKOH_00363`	100.0	69.919 / 62.774	Review
`TkA08G429520`	`LXL04_034722`	`JCVI_TKOH_00363`	100.0	100.0 / 100.0	Strict
`TkA08G429540`	`LXL04_034723`	`JCVI_TKOH_00363`	100.0	100.0 / 97.942	Complex
`TkA08G430820`	`LXL04_034726`	`JCVI_TKOH_00363`	100.0	100.0 / 100.0	Strict
`TkA08G430830`	`LXL04_034727`	`JCVI_TKOH_00363`	94.1	100.0 / 100.0	Probable
`TkA08G430870`	`LXL04_034728`	`JCVI_TKOH_00363`	97.9	87.838 / 90.698	Strict
`TkA08G430950`	`LXL04_034729`	`JCVI_TKOH_00363`	96.2	100.0 / 100.0	Complex
`TkA08G430970`	`LXL04_034730`	`JCVI_TKOH_00363`	95.6	100.0 / 100.0	Strict
`TkA08G430980`	`LXL04_034731`	`JCVI_TKOH_00363`	100.0	100.0 / 100.0	Strict
`TkA08G431030`	`LXL04_034732`	`JCVI_TKOH_00363`	100.0	77.982 / 11.502	Complex
`TkA08G431130`	`LXL04_034734`	`JCVI_TKOH_00363`	99.4	98.214 / 79.327	Probable
`TkA08G431140`	`LXL04_034735`	`JCVI_TKOH_00363`	87.3	100.0 / 100.0	Review
`TkA08G431420`	`LXL04_034738`	`JCVI_TKOH_00363`	100.0	100.0 / 100.0	Review
`TkA08G431430`	`LXL04_034739`	`JCVI_TKOH_00363`	91.8	92.151 / 75.188	Complex
`TkA08G431650`	`LXL04_034741`	`JCVI_TKOH_00363`	99.1	100.0 / 100.0	Strict
`TkA08G431890`	`LXL04_034742`	`JCVI_TKOH_00363`	99.8	100.0 / 100.0	Strict
`TkA08G431920`	`LXL04_034743`	`JCVI_TKOH_00363`	76.0	98.99 / 97.864	Complex
`TkA08G431930`	`LXL04_034744`	`JCVI_TKOH_00363`	96.9	57.386 / 57.5	Review
`TkA08G431970`	`LXL04_034745`	`JCVI_TKOH_00363`	40.8	100.0 / 100.0	Review
`TkA08G433330`	`LXL04_034748`	`JCVI_TKOH_00363`	99.1	95.77 / 63.4	Review
`TkA08G433360`	`LXL04_034749`	`JCVI_TKOH_00363`	99.0	99.388 / 71.829	Probable
`TkA08G433380`	`LXL04_034750`	`JCVI_TKOH_00363`	95.0	100.0 / 100.0	Complex
`TkA08G433500`	`LXL04_034751`	`JCVI_TKOH_00363`	92.8	100.0 / 100.0	Probable
`TkA08G433900`	`LXL04_034754`	`JCVI_TKOH_00363`	100.0	100.0 / 100.0	Strict
`TkA08G434020`	`LXL04_034757`	`JCVI_TKOH_00363`	99.7	100.0 / 100.0	Strict
`TkA08G434190`	`LXL04_034758`	`JCVI_TKOH_00363`	100.0	100.0 / 100.0	Strict
`TkA08G434240`	`LXL04_034759`	`JCVI_TKOH_00363`	100.0	100.0 / 100.0	Strict
`TkA08G434350`	`LXL04_034762`	`JCVI_TKOH_00363`	94.3	100.0 / 100.0	Probable
`TkA08G434420`	`LXL04_034763`	`JCVI_TKOH_00363`	99.2	100.0 / 100.0	Strict
`TkA08G434680`	`LXL04_034765`	`JCVI_TKOH_00363`	99.5	100.0 / 100.0	Review
`TkA08G434830`	`LXL04_034765`	`JCVI_TKOH_00363`	80.1	99.287 / 97.19	Complex
`TkA08G434920`	`LXL04_034768`	`JCVI_TKOH_00363`	100.0	65.693 / 81.818	Review
`TkA08G435330`	`LXL04_034769`	`JCVI_TKOH_00363`	98.9	95.932 / 98.518	Strict
`TkA08G435550`	`LXL04_034772`	`JCVI_TKOH_00363`	90.9	100.0 / 87.086	Complex
`TkA08G435680`	`LXL04_034774`	`JCVI_TKOH_00363`	94.2	94.237 / 46.702	Complex
`TkA08G435740`	`LXL04_034777`	`JCVI_TKOH_00363`	100.0	100.0 / 100.0	Complex
`TkA08G435790`	`LXL04_034778`	`JCVI_TKOH_00363`	100.0	100.0 / 100.0	Strict
`TkA08G436340`	`LXL04_034779`	`JCVI_TKOH_00363`	100.0	100.0 / 91.099	Strict
`TkA08G436370`	`LXL04_034780`	`JCVI_TKOH_00363`	98.6	100.0 / 100.0	Strict
`TkA08G436950`	`LXL04_034782`	`JCVI_TKOH_00363`	97.9	98.96 / 56.43	Review
`TkA08G437110`	`LXL04_034785`	`JCVI_TKOH_00363`	95.8	100.0 / 100.0	Strict
`TkA08G437120`	`LXL04_034786`	`JCVI_TKOH_00363`	99.9	100.0 / 100.0	Strict