同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00202
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 44
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00202

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00202 Chr04 92319438-95697417 Chr09 26795734-30419318 mixed High 44 anchors
Chr04 92319438-95697417 Chr09 26795734-30419318 JCVI_TKOH_00202 · 44 gene pairs TkA04G367260 | LXL04_037964 | 94.5% | RBH_sequence_supported | Probable TkA04G367270 | LXL04_037963 | 100.0% | multi_source_to_OH1004 | Complex TkA04G367750 | LXL04_037962 | 94.9% | RBH_sequence_supported | Probable TkA04G367760 | LXL04_037961 | 90.0% | RBH_sequence_supported | Probable TkA04G367770 | LXL04_037960 | 97.9% | RBH_high_identity_coverage_synteny | Strict TkA04G367790 | LXL04_037959 | 95.2% | multi_source_to_OH1004 | Complex TkA04G367830 | LXL04_037958 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA04G367840 | LXL04_037957 | 97.6% | RBH_high_identity_coverage_synteny | Strict TkA04G367870 | LXL04_037956 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA04G367960 | LXL04_037954 | 95.3% | multi_source_to_OH1004 | Complex TkA04G368350 | LXL04_037967 | 97.6% | RBH_high_identity_coverage_synteny | Strict TkA04G368370 | LXL04_037968 | 99.5% | RBH_high_identity_coverage_synteny | Strict
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00202 Chr04:92319438-95697417 Chr09:26795734-30419318 mixed 44 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 44 · 当前范围 1–44 · 页码 1/1

TkA04G367260 → LXL04_037964
94.5%
TkA04G367270 → LXL04_037963
100.0%
TkA04G367750 → LXL04_037962
94.9%
TkA04G367760 → LXL04_037961
90.0%
TkA04G367770 → LXL04_037960
97.9%
TkA04G367790 → LXL04_037959
95.2%
TkA04G367830 → LXL04_037958
100.0%
TkA04G367840 → LXL04_037957
97.6%
TkA04G367870 → LXL04_037956
100.0%
TkA04G367960 → LXL04_037954
95.3%
TkA04G368350 → LXL04_037967
97.6%
TkA04G368370 → LXL04_037968
99.5%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA04G367260LXL04_037964JCVI_TKOH_0020294.5100.0 / 88.158Probable
TkA04G367270LXL04_037963JCVI_TKOH_00202100.0100.0 / 91.304Complex
TkA04G367750LXL04_037962JCVI_TKOH_0020294.9100.0 / 100.0Probable
TkA04G367760LXL04_037961JCVI_TKOH_0020290.0100.0 / 100.0Probable
TkA04G367770LXL04_037960JCVI_TKOH_0020297.9100.0 / 100.0Strict
TkA04G367790LXL04_037959JCVI_TKOH_0020295.299.863 / 99.868Complex
TkA04G367830LXL04_037958JCVI_TKOH_00202100.0100.0 / 100.0Strict
TkA04G367840LXL04_037957JCVI_TKOH_0020297.6100.0 / 100.0Strict
TkA04G367870LXL04_037956JCVI_TKOH_00202100.0100.0 / 87.321Strict
TkA04G367960LXL04_037954JCVI_TKOH_0020295.3100.0 / 100.0Complex
TkA04G368350LXL04_037967JCVI_TKOH_0020297.6100.0 / 100.0Strict
TkA04G368370LXL04_037968JCVI_TKOH_0020299.5100.0 / 98.516Strict
TkA04G368630LXL04_037974JCVI_TKOH_0020287.7100.0 / 100.0待复核
TkA04G369040LXL04_037976JCVI_TKOH_0020299.2100.0 / 100.0Strict
TkA04G369050LXL04_037977JCVI_TKOH_0020299.597.964 / 100.0Strict
TkA04G369260LXL04_037978JCVI_TKOH_0020296.399.567 / 99.075Complex
TkA04G369330LXL04_037979JCVI_TKOH_0020298.783.836 / 54.789待复核
TkA04G369350LXL04_037980JCVI_TKOH_00202100.0100.0 / 67.213待复核
TkA04G369370LXL04_037981JCVI_TKOH_0020290.099.016 / 91.436Complex
TkA04G371790LXL04_037987JCVI_TKOH_0020294.9100.0 / 100.0Probable
TkA04G372420LXL04_037988JCVI_TKOH_0020299.394.737 / 69.545待复核
TkA04G372490LXL04_037990JCVI_TKOH_00202100.0100.0 / 65.278待复核
TkA04G372560LXL04_037992JCVI_TKOH_0020294.349.074 / 68.831待复核
TkA04G372580LXL04_037993JCVI_TKOH_0020298.9100.0 / 100.0Strict
TkA04G373080LXL04_037997JCVI_TKOH_0020299.899.845 / 99.846Strict
TkA04G373630LXL04_037999JCVI_TKOH_0020298.2100.0 / 100.0Strict
TkA04G373690LXL04_038001JCVI_TKOH_0020295.3100.0 / 100.0Strict
TkA04G373760LXL04_038002JCVI_TKOH_00202100.0100.0 / 100.0Strict
TkA04G373880LXL04_038004JCVI_TKOH_0020278.0100.0 / 93.514Complex
TkA04G373940LXL04_038005JCVI_TKOH_0020294.2100.0 / 98.464Probable
TkA04G373950LXL04_038006JCVI_TKOH_0020299.5100.0 / 100.0Complex
TkA04G374010LXL04_038007JCVI_TKOH_00202100.0100.0 / 100.0Strict
TkA04G374020LXL04_038009JCVI_TKOH_0020299.051.256 / 95.327待复核
TkA04G374170LXL04_038010JCVI_TKOH_00202100.0100.0 / 100.0Complex
TkA04G374560LXL04_038016JCVI_TKOH_00202100.0100.0 / 80.916Complex
TkA04G374740LXL04_038017JCVI_TKOH_0020290.8100.0 / 96.235Probable
TkA04G375600LXL04_038022JCVI_TKOH_0020290.8100.0 / 100.0Complex
TkA04G375970LXL04_038024JCVI_TKOH_00202100.0100.0 / 100.0Complex
TkA04G376780LXL04_038028JCVI_TKOH_0020276.496.784 / 87.002待复核
TkA04G377150LXL04_038031JCVI_TKOH_00202100.097.126 / 92.35待复核
TkA04G378400LXL04_038047JCVI_TKOH_0020289.730.952 / 30.233Complex
TkA04G378410LXL04_038037JCVI_TKOH_0020292.333.333 / 20.419Complex
TkA04G378860LXL04_038054JCVI_TKOH_0020292.8100.0 / 100.0Complex
TkA04G379840LXL04_038031JCVI_TKOH_0020285.8100.0 / 100.0Complex