同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00091
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 26
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00091

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00091 Chr02 115245217-116084689 Chr03 40652569-41487364 mixed High 26 anchors
Chr02 115245217-116084689 Chr03 40652569-41487364 JCVI_TKOH_00091 · 26 gene pairs TkA02G452870 | LXL04_014063 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA02G452950 | LXL04_014062 | 100.0% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA02G452970 | LXL04_014061 | 92.0% | multi_source_to_OH1004 | Complex TkA02G453080 | LXL04_014059 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA02G453100 | LXL04_014058 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA02G453270 | LXL04_014056 | 93.6% | RBH_sequence_supported | Probable TkA02G453540 | LXL04_014051 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA02G453550 | LXL04_014051 | 94.5% | non_reciprocal_best_hit | Complex TkA02G453560 | LXL04_014050 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA02G453590 | LXL04_014049 | 99.8% | RBH_high_identity_coverage_synteny | Strict TkA02G453630 | LXL04_014048 | 99.7% | multi_source_to_OH1004 | Complex TkA02G453920 | LXL04_014044 | 84.0% | multi_source_to_OH1004 | Complex
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00091 Chr02:115245217-116084689 Chr03:40652569-41487364 mixed 26 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 26 · 当前范围 1–26 · 页码 1/1

TkA02G452870 → LXL04_014063
100.0%
TkA02G452950 → LXL04_014062
100.0%
TkA02G452970 → LXL04_014061
92.0%
TkA02G453080 → LXL04_014059
100.0%
TkA02G453100 → LXL04_014058
100.0%
TkA02G453270 → LXL04_014056
93.6%
TkA02G453540 → LXL04_014051
100.0%
TkA02G453550 → LXL04_014051
94.5%
TkA02G453560 → LXL04_014050
100.0%
TkA02G453590 → LXL04_014049
99.8%
TkA02G453630 → LXL04_014048
99.7%
TkA02G453920 → LXL04_014044
84.0%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA02G452870LXL04_014063JCVI_TKOH_00091100.0100.0 / 100.0Strict
TkA02G452950LXL04_014062JCVI_TKOH_00091100.0100.0 / 67.624待复核
TkA02G452970LXL04_014061JCVI_TKOH_0009192.0100.0 / 100.0Complex
TkA02G453080LXL04_014059JCVI_TKOH_00091100.098.621 / 58.367待复核
TkA02G453100LXL04_014058JCVI_TKOH_00091100.0100.0 / 100.0Strict
TkA02G453270LXL04_014056JCVI_TKOH_0009193.6100.0 / 100.0Probable
TkA02G453540LXL04_014051JCVI_TKOH_00091100.0100.0 / 33.444待复核
TkA02G453550LXL04_014051JCVI_TKOH_0009194.567.593 / 12.146Complex
TkA02G453560LXL04_014050JCVI_TKOH_00091100.0100.0 / 100.0Strict
TkA02G453590LXL04_014049JCVI_TKOH_0009199.8100.0 / 100.0Strict
TkA02G453630LXL04_014048JCVI_TKOH_0009199.7100.0 / 100.0Complex
TkA02G453920LXL04_014044JCVI_TKOH_0009184.0100.0 / 100.0Complex
TkA02G453930LXL04_014043JCVI_TKOH_0009179.5100.0 / 100.0待复核
TkA02G453980LXL04_014042JCVI_TKOH_00091100.093.651 / 59.596待复核
TkA02G454070LXL04_014041JCVI_TKOH_0009199.590.521 / 100.0Strict
TkA02G454090LXL04_014040JCVI_TKOH_00091100.099.771 / 95.395Strict
TkA02G454120LXL04_014038JCVI_TKOH_00091100.063.964 / 25.725待复核
TkA02G454210LXL04_014034JCVI_TKOH_0009199.6100.0 / 100.0Complex
TkA02G454290LXL04_014032JCVI_TKOH_0009191.7100.0 / 94.087Probable
TkA02G454550LXL04_014029JCVI_TKOH_00091100.0100.0 / 100.0Strict
TkA02G454570LXL04_014028JCVI_TKOH_00091100.0100.0 / 100.0Strict
TkA02G455250LXL04_014027JCVI_TKOH_0009198.0100.0 / 100.0Strict
TkA02G455650LXL04_014021JCVI_TKOH_0009188.1100.0 / 100.0待复核
TkA02G455800LXL04_014020JCVI_TKOH_0009196.5100.0 / 100.0Strict
TkA02G455810LXL04_014019JCVI_TKOH_0009199.1100.0 / 86.437Strict
TkA02G455820LXL04_014018JCVI_TKOH_0009193.899.121 / 47.199待复核