Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00274
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 26
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00274The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00274 |
Chr06:46043239-46953906 | Chr05:80474485-81605005 | + | 26 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 26 · Showing 1–26 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA06G175430 | LXL04_024083 | JCVI_TKOH_00274 | 75.2 | 100.0 / 78.035 | Review |
TkA06G175920 | LXL04_024084 | JCVI_TKOH_00274 | 99.2 | 100.0 / 100.0 | Complex |
TkA06G175930 | LXL04_024085 | JCVI_TKOH_00274 | 99.3 | 96.284 / 100.0 | Complex |
TkA06G176040 | LXL04_024086 | JCVI_TKOH_00274 | 100.0 | 95.161 / 67.045 | Review |
TkA06G176050 | LXL04_024087 | JCVI_TKOH_00274 | 100.0 | 100.0 / 100.0 | Strict |
TkA06G176790 | LXL04_024100 | JCVI_TKOH_00274 | 98.1 | 100.0 / 100.0 | Complex |
TkA06G176830 | LXL04_024101 | JCVI_TKOH_00274 | 100.0 | 100.0 / 100.0 | Complex |
TkA06G177280 | LXL04_024102 | JCVI_TKOH_00274 | 98.3 | 100.0 / 54.059 | Review |
TkA06G177290 | LXL04_024103 | JCVI_TKOH_00274 | 99.7 | 100.0 / 100.0 | Strict |
TkA06G177300 | LXL04_024104 | JCVI_TKOH_00274 | 100.0 | 81.875 / 50.973 | Complex |
TkA06G177320 | LXL04_024105 | JCVI_TKOH_00274 | 100.0 | 100.0 / 92.179 | Strict |
TkA06G177340 | LXL04_024106 | JCVI_TKOH_00274 | 94.3 | 100.0 / 92.823 | Probable |
TkA06G177350 | LXL04_024107 | JCVI_TKOH_00274 | 99.1 | 97.994 / 49.138 | Review |
TkA06G177360 | LXL04_024107 | JCVI_TKOH_00274 | 71.5 | 94.286 / 39.799 | Complex |
TkA06G177410 | LXL04_024112 | JCVI_TKOH_00274 | 85.5 | 93.6 / 69.231 | Review |
TkA06G177470 | LXL04_024108 | JCVI_TKOH_00274 | 67.7 | 100.0 / 100.0 | Review |
TkA06G177560 | LXL04_024108 | JCVI_TKOH_00274 | 66.8 | 100.0 / 100.0 | Complex |
TkA06G177690 | LXL04_024110 | JCVI_TKOH_00274 | 67.7 | 100.0 / 100.0 | Review |
TkA06G177730 | LXL04_024111 | JCVI_TKOH_00274 | 99.5 | 100.0 / 100.0 | Strict |
TkA06G178160 | LXL04_024114 | JCVI_TKOH_00274 | 99.8 | 100.0 / 100.0 | Complex |
TkA06G178400 | LXL04_024116 | JCVI_TKOH_00274 | 99.4 | 90.979 / 90.805 | Complex |
TkA06G178530 | LXL04_024117 | JCVI_TKOH_00274 | 78.2 | 37.692 / 32.164 | Complex |
TkA06G178610 | LXL04_024119 | JCVI_TKOH_00274 | 100.0 | 100.0 / 100.0 | Strict |
TkA06G179110 | LXL04_024123 | JCVI_TKOH_00274 | 96.9 | 29.907 / 40.506 | Review |
TkA06G179210 | LXL04_024123 | JCVI_TKOH_00274 | 96.9 | 29.907 / 40.506 | Complex |
TkA06G179390 | LXL04_024123 | JCVI_TKOH_00274 | 50.0 | 39.56 / 91.139 | Complex |