record_type input_id synteny_block_id query_reference target_reference query_gene target_gene query_chr query_start query_end target_chr target_start target_end gene_pair_count identity query_coverage target_coverage reciprocal_best_hit relationship_type confidence orientation note evidence_summary source_table block_summary JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 Chr06 46043239 46953906 Chr05 80474485 81605005 26 High + Formal JCVI synteny block from rebuilt ID map pipeline. Formal JCVI synteny block from rebuilt ID map pipeline. synteny_block block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G175430 LXL04_024083 Chr06 46043239 46044051 Chr05 80589971 80591011 75.2 100.0 78.035 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=75.200; qcov=100.000; tcov=78.035; CDS_RBH=1; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G175920 LXL04_024084 Chr06 46176148 46183473 Chr05 80739674 80746651 99.2 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.200; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G175930 LXL04_024085 Chr06 46183940 46186144 Chr05 80747405 80749440 99.3 96.284 100.0 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=99.300; qcov=96.284; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G176040 LXL04_024086 Chr06 46203530 46203904 Chr05 80757824 80758756 100.0 95.161 67.045 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=95.161; tcov=67.045; CDS_RBH=1; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G176050 LXL04_024087 Chr06 46205459 46205940 Chr05 80760031 80760512 100.0 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G176790 LXL04_024100 Chr06 46356754 46361309 Chr05 81094871 81098842 98.1 100.0 100.0 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=98.100; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G176830 LXL04_024101 Chr06 46366818 46367291 Chr05 81104811 81105284 100.0 100.0 100.0 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G177280 LXL04_024102 Chr06 46445955 46452425 Chr05 81184019 81189641 98.3 100.0 54.059 1 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=98.300; qcov=100.000; tcov=54.059; CDS_RBH=1; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G177290 LXL04_024103 Chr06 46452552 46454890 Chr05 81190165 81191862 99.7 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.700; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G177300 LXL04_024104 Chr06 46457251 46457805 Chr05 81194047 81195171 100.0 81.875 50.973 1 multi_candidate_from_TK1151 Complex category=one_to_many; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=81.875; tcov=50.973; CDS_RBH=1; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G177320 LXL04_024105 Chr06 46463541 46464038 Chr05 81200908 81201447 100.0 100.0 92.179 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=92.179; CDS_RBH=1; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G177340 LXL04_024106 Chr06 46470293 46470877 Chr05 81207672 81208301 94.3 100.0 92.823 1 RBH_sequence_supported Probable category=probable_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=94.300; qcov=100.000; tcov=92.823; CDS_RBH=1; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G177350 LXL04_024107 Chr06 46474893 46475942 Chr05 81212959 81215049 99.1 97.994 49.138 1 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.100; qcov=97.994; tcov=49.138; CDS_RBH=1; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G177360 LXL04_024107 Chr06 46475993 46476862 Chr05 81212959 81215049 71.5 94.286 39.799 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=71.500; qcov=94.286; tcov=39.799; CDS_RBH=0; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G177410 LXL04_024112 Chr06 46495149 46495526 Chr05 81300744 81301253 85.5 93.6 69.231 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=85.500; qcov=93.600; tcov=69.231; CDS_RBH=0; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G177470 LXL04_024108 Chr06 46506708 46507694 Chr05 81250643 81251629 67.7 100.0 100.0 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=67.700; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G177560 LXL04_024108 Chr06 46522796 46523782 Chr05 81250643 81251629 66.8 100.0 100.0 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=66.800; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G177690 LXL04_024110 Chr06 46545133 46546119 Chr05 81271037 81272023 67.7 100.0 100.0 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=67.700; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G177730 LXL04_024111 Chr06 46559411 46560061 Chr05 81299585 81300235 99.5 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.500; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G178160 LXL04_024114 Chr06 46637174 46639394 Chr05 81377166 81379386 99.8 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.800; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G178400 LXL04_024116 Chr06 46697956 46708674 Chr05 81386993 81389254 99.4 90.979 90.805 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.400; qcov=90.979; tcov=90.805; CDS_RBH=0; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G178530 LXL04_024117 Chr06 46745314 46746200 Chr05 81416900 81419900 78.2 37.692 32.164 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=78.200; qcov=37.692; tcov=32.164; CDS_RBH=0; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G178610 LXL04_024119 Chr06 46782275 46783462 Chr05 81451393 81452578 100.0 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G179110 LXL04_024123 Chr06 46901112 46901575 Chr05 81604335 81605005 96.9 29.907 40.506 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=96.900; qcov=29.907; tcov=40.506; CDS_RBH=0; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G179210 LXL04_024123 Chr06 46916063 46916526 Chr05 81604335 81605005 96.9 29.907 40.506 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=96.900; qcov=29.907; tcov=40.506; CDS_RBH=0; JCVI=JCVI_TKOH_00274 id_converter_ready block_anchor JCVI_TKOH_00274 JCVI_TKOH_00274 TK1151 OH1004 TkA06G179390 LXL04_024123 Chr06 46953218 46953906 Chr05 81604335 81605005 50.0 39.56 91.139 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=50.000; qcov=39.560; tcov=91.139; CDS_RBH=1; JCVI=JCVI_TKOH_00274 id_converter_ready