Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00198

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 151

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00198

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00198 Chr04 71852954-83865378 Chr09 7007721-16184230 mixed High 151 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00198`	Chr04:71852954-83865378	Chr09:7007721-16184230	mixed	151	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 151 · Showing 1–151 · Page 1/1

Download All Anchors TSV

TkA04G285580 → LXL04_037350

100.0%

TkA04G287780 → LXL04_037361

99.7%

TkA04G288010 → LXL04_037362

50.4%

TkA04G288550 → LXL04_037365

99.8%

TkA04G288620 → LXL04_037366

100.0%

TkA04G288930 → LXL04_037368

96.6%

TkA04G290310 → LXL04_037369

99.0%

TkA04G290920 → LXL04_037373

99.7%

TkA04G293120 → LXL04_037389

79.5%

TkA04G293900 → LXL04_037391

64.3%

TkA04G295340 → LXL04_037404

72.2%

TkA04G295410 → LXL04_037406

97.1%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA04G285580`	`LXL04_037350`	`JCVI_TKOH_00198`	100.0	79.085 / 27.816	Complex
`TkA04G287780`	`LXL04_037361`	`JCVI_TKOH_00198`	99.7	100.0 / 100.0	Complex
`TkA04G288010`	`LXL04_037362`	`JCVI_TKOH_00198`	50.4	99.187 / 16.037	Complex
`TkA04G288550`	`LXL04_037365`	`JCVI_TKOH_00198`	99.8	100.0 / 100.0	Strict
`TkA04G288620`	`LXL04_037366`	`JCVI_TKOH_00198`	100.0	100.0 / 61.682	Review
`TkA04G288930`	`LXL04_037368`	`JCVI_TKOH_00198`	96.6	7.436 / 5.87	Review
`TkA04G290310`	`LXL04_037369`	`JCVI_TKOH_00198`	99.0	100.0 / 100.0	Review
`TkA04G290920`	`LXL04_037373`	`JCVI_TKOH_00198`	99.7	100.0 / 64.459	Complex
`TkA04G293120`	`LXL04_037389`	`JCVI_TKOH_00198`	79.5	94.194 / 92.994	Complex
`TkA04G293900`	`LXL04_037391`	`JCVI_TKOH_00198`	64.3	97.403 / 99.408	Complex
`TkA04G295340`	`LXL04_037404`	`JCVI_TKOH_00198`	72.2	70.37 / 83.125	Complex
`TkA04G295410`	`LXL04_037406`	`JCVI_TKOH_00198`	97.1	94.972 / 93.443	Review
`TkA04G297760`	`LXL04_037369`	`JCVI_TKOH_00198`	99.0	100.0 / 100.0	Review
`TkA04G298180`	`LXL04_037372`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G298230`	`LXL04_037373`	`JCVI_TKOH_00198`	100.0	100.0 / 64.459	Complex
`TkA04G298560`	`LXL04_037403`	`JCVI_TKOH_00198`	39.2	53.933 / 54.878	Complex
`TkA04G298990`	`LXL04_037380`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G299610`	`LXL04_037388`	`JCVI_TKOH_00198`	97.2	100.0 / 75.524	Complex
`TkA04G299620`	`LXL04_037389`	`JCVI_TKOH_00198`	95.4	67.699 / 97.452	Complex
`TkA04G299910`	`LXL04_037391`	`JCVI_TKOH_00198`	89.3	100.0 / 99.408	Complex
`TkA04G301230`	`LXL04_037404`	`JCVI_TKOH_00198`	76.6	98.165 / 66.875	Complex
`TkA04G301490`	`LXL04_037404`	`JCVI_TKOH_00198`	92.7	87.261 / 85.625	Complex
`TkA04G301570`	`LXL04_037406`	`JCVI_TKOH_00198`	84.3	89.0 / 48.634	Complex
`TkA04G301840`	`LXL04_037405`	`JCVI_TKOH_00198`	99.5	100.0 / 100.0	Strict
`TkA04G301960`	`LXL04_037406`	`JCVI_TKOH_00198`	100.0	100.0 / 99.454	Review
`TkA04G304170`	`LXL04_037412`	`JCVI_TKOH_00198`	99.7	100.0 / 100.0	Complex
`TkA04G304210`	`LXL04_037413`	`JCVI_TKOH_00198`	99.8	100.0 / 100.0	Complex
`TkA04G304220`	`LXL04_037414`	`JCVI_TKOH_00198`	96.4	100.0 / 100.0	Strict
`TkA04G304280`	`LXL04_037416`	`JCVI_TKOH_00198`	100.0	97.573 / 95.714	Strict
`TkA04G304290`	`LXL04_037417`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Complex
`TkA04G305330`	`LXL04_037420`	`JCVI_TKOH_00198`	97.0	100.0 / 60.366	Complex
`TkA04G305360`	`LXL04_037421`	`JCVI_TKOH_00198`	97.6	100.0 / 74.545	Probable
`TkA04G305460`	`LXL04_037422`	`JCVI_TKOH_00198`	99.2	100.0 / 100.0	Strict
`TkA04G305750`	`LXL04_037425`	`JCVI_TKOH_00198`	99.1	100.0 / 59.985	Review
`TkA04G305880`	`LXL04_037425`	`JCVI_TKOH_00198`	98.4	50.0 / 23.502	Complex
`TkA04G306370`	`LXL04_037425`	`JCVI_TKOH_00198`	97.1	99.808 / 40.015	Review
`TkA04G306430`	`LXL04_037426`	`JCVI_TKOH_00198`	96.2	91.228 / 43.515	Review
`TkA04G307110`	`LXL04_037427`	`JCVI_TKOH_00198`	95.9	100.0 / 86.607	Strict
`TkA04G307420`	`LXL04_037428`	`JCVI_TKOH_00198`	97.2	100.0 / 46.204	Review
`TkA04G307430`	`LXL04_037428`	`JCVI_TKOH_00198`	100.0	100.0 / 24.512	Review
`TkA04G307600`	`LXL04_037428`	`JCVI_TKOH_00198`	93.7	93.162 / 24.078	Complex
`TkA04G307610`	`LXL04_037429`	`JCVI_TKOH_00198`	98.5	100.0 / 99.609	Strict
`TkA04G307620`	`LXL04_037430`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G307630`	`LXL04_037431`	`JCVI_TKOH_00198`	99.8	100.0 / 100.0	Strict
`TkA04G307850`	`LXL04_037433`	`JCVI_TKOH_00198`	99.9	100.0 / 100.0	Complex
`TkA04G308230`	`LXL04_037436`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Review
`TkA04G308260`	`LXL04_037438`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G308300`	`LXL04_037439`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Review
`TkA04G308330`	`LXL04_037441`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Complex
`TkA04G308920`	`LXL04_037444`	`JCVI_TKOH_00198`	99.5	81.933 / 77.075	Complex
`TkA04G308930`	`LXL04_037443`	`JCVI_TKOH_00198`	100.0	99.198 / 66.369	Review
`TkA04G309110`	`LXL04_037445`	`JCVI_TKOH_00198`	97.7	100.0 / 100.0	Strict
`TkA04G309230`	`LXL04_037446`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G309290`	`LXL04_037448`	`JCVI_TKOH_00198`	100.0	100.0 / 88.889	Review
`TkA04G309560`	`LXL04_037452`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G309650`	`LXL04_037457`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G309670`	`LXL04_037458`	`JCVI_TKOH_00198`	100.0	100.0 / 75.776	Probable
`TkA04G309700`	`LXL04_037459`	`JCVI_TKOH_00198`	97.4	95.701 / 100.0	Complex
`TkA04G309720`	`LXL04_037460`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G309730`	`LXL04_037461`	`JCVI_TKOH_00198`	99.2	100.0 / 65.079	Review
`TkA04G309770`	`LXL04_037462`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Review
`TkA04G309840`	`LXL04_037477`	`JCVI_TKOH_00198`	92.7	100.0 / 100.0	Probable
`TkA04G309920`	`LXL04_037464`	`JCVI_TKOH_00198`	87.1	100.0 / 100.0	Complex
`TkA04G310330`	`LXL04_037465`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G311280`	`LXL04_037469`	`JCVI_TKOH_00198`	85.0	100.0 / 100.0	Review
`TkA04G311530`	`LXL04_037471`	`JCVI_TKOH_00198`	100.0	91.667 / 69.291	Review
`TkA04G311680`	`LXL04_037479`	`JCVI_TKOH_00198`	99.5	100.0 / 73.494	Complex
`TkA04G312440`	`LXL04_037483`	`JCVI_TKOH_00198`	96.4	96.0 / 55.522	Review
`TkA04G312770`	`LXL04_037484`	`JCVI_TKOH_00198`	100.0	100.0 / 97.468	Review
`TkA04G312870`	`LXL04_037487`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G312910`	`LXL04_037489`	`JCVI_TKOH_00198`	98.9	98.122 / 76.98	Probable
`TkA04G313880`	`LXL04_037494`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Complex
`TkA04G313890`	`LXL04_037495`	`JCVI_TKOH_00198`	99.5	100.0 / 78.884	Review
`TkA04G313900`	`LXL04_037496`	`JCVI_TKOH_00198`	99.5	99.105 / 98.444	Complex
`TkA04G314210`	`LXL04_037498`	`JCVI_TKOH_00198`	100.0	99.542 / 99.694	Complex
`TkA04G314240`	`LXL04_037500`	`JCVI_TKOH_00198`	100.0	88.235 / 92.92	Complex
`TkA04G314520`	`LXL04_037503`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Complex
`TkA04G314530`	`LXL04_037504`	`JCVI_TKOH_00198`	99.7	98.698 / 78.144	Probable
`TkA04G314550`	`LXL04_037505`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G314560`	`LXL04_037506`	`JCVI_TKOH_00198`	97.6	100.0 / 100.0	Strict
`TkA04G314580`	`LXL04_037507`	`JCVI_TKOH_00198`	99.2	100.0 / 100.0	Strict
`TkA04G314610`	`LXL04_037508`	`JCVI_TKOH_00198`	100.0	90.476 / 60.51	Complex
`TkA04G314620`	`LXL04_037509`	`JCVI_TKOH_00198`	99.0	100.0 / 86.682	Strict
`TkA04G314630`	`LXL04_037510`	`JCVI_TKOH_00198`	99.5	100.0 / 84.2	Strict
`TkA04G314640`	`LXL04_037511`	`JCVI_TKOH_00198`	99.6	100.0 / 100.0	Complex
`TkA04G314650`	`LXL04_037512`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G314940`	`LXL04_037513`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G315280`	`LXL04_037516`	`JCVI_TKOH_00198`	95.5	100.0 / 100.0	Review
`TkA04G316290`	`LXL04_037519`	`JCVI_TKOH_00198`	99.5	77.544 / 99.103	Complex
`TkA04G317640`	`LXL04_037531`	`JCVI_TKOH_00198`	95.1	100.0 / 100.0	Complex
`TkA04G317650`	`LXL04_037532`	`JCVI_TKOH_00198`	100.0	100.0 / 70.157	Review
`TkA04G318410`	`LXL04_037534`	`JCVI_TKOH_00198`	95.7	100.0 / 57.764	Review
`TkA04G318600`	`LXL04_037535`	`JCVI_TKOH_00198`	98.3	93.91 / 97.154	Complex
`TkA04G318610`	`LXL04_037536`	`JCVI_TKOH_00198`	100.0	89.771 / 100.0	Complex
`TkA04G318630`	`LXL04_037537`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Review
`TkA04G319560`	`LXL04_037531`	`JCVI_TKOH_00198`	94.2	96.634 / 96.254	Complex
`TkA04G319570`	`LXL04_037532`	`JCVI_TKOH_00198`	100.0	100.0 / 70.157	Complex
`TkA04G320300`	`LXL04_037534`	`JCVI_TKOH_00198`	97.5	100.0 / 100.0	Complex
`TkA04G320410`	`LXL04_037535`	`JCVI_TKOH_00198`	100.0	100.0 / 21.138	Review
`TkA04G320420`	`LXL04_037535`	`JCVI_TKOH_00198`	97.9	100.0 / 57.317	Review
`TkA04G320430`	`LXL04_037536`	`JCVI_TKOH_00198`	100.0	89.771 / 100.0	Complex
`TkA04G320450`	`LXL04_037537`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Review
`TkA04G320790`	`LXL04_037538`	`JCVI_TKOH_00198`	96.7	100.0 / 35.69	Review
`TkA04G320820`	`LXL04_037539`	`JCVI_TKOH_00198`	95.6	69.543 / 99.275	Complex
`TkA04G320920`	`LXL04_037542`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G321610`	`LXL04_037544`	`JCVI_TKOH_00198`	99.2	100.0 / 100.0	Strict
`TkA04G322400`	`LXL04_037548`	`JCVI_TKOH_00198`	97.2	64.66 / 100.0	Review
`TkA04G322820`	`LXL04_037552`	`JCVI_TKOH_00198`	99.1	100.0 / 100.0	Complex
`TkA04G322890`	`LXL04_037555`	`JCVI_TKOH_00198`	100.0	97.831 / 83.453	Complex
`TkA04G323130`	`LXL04_037555`	`JCVI_TKOH_00198`	68.0	99.236 / 81.398	Complex
`TkA04G323190`	`LXL04_037555`	`JCVI_TKOH_00198`	66.7	97.093 / 69.373	Complex
`TkA04G323380`	`LXL04_037555`	`JCVI_TKOH_00198`	65.0	99.394 / 84.07	Complex
`TkA04G323790`	`LXL04_037555`	`JCVI_TKOH_00198`	66.5	99.853 / 70.298	Complex
`TkA04G324310`	`LXL04_037552`	`JCVI_TKOH_00198`	99.1	100.0 / 100.0	Complex
`TkA04G324440`	`LXL04_037555`	`JCVI_TKOH_00198`	98.6	97.831 / 83.453	Complex
`TkA04G324460`	`LXL04_037555`	`JCVI_TKOH_00198`	69.5	99.256 / 81.398	Complex
`TkA04G324510`	`LXL04_037555`	`JCVI_TKOH_00198`	68.7	98.303 / 84.07	Complex
`TkA04G324720`	`LXL04_037555`	`JCVI_TKOH_00198`	39.1	98.615 / 60.021	Complex
`TkA04G324730`	`LXL04_037555`	`JCVI_TKOH_00198`	67.6	78.462 / 10.791	Complex
`TkA04G324850`	`LXL04_037555`	`JCVI_TKOH_00198`	53.6	99.147 / 80.781	Complex
`TkA04G325090`	`LXL04_037572`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G325500`	`LXL04_037573`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Review
`TkA04G326220`	`LXL04_037574`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Review
`TkA04G326240`	`LXL04_037575`	`JCVI_TKOH_00198`	76.0	54.07 / 53.608	Complex
`TkA04G326300`	`LXL04_037577`	`JCVI_TKOH_00198`	98.6	97.912 / 86.27	Complex
`TkA04G326310`	`LXL04_037577`	`JCVI_TKOH_00198`	37.7	92.157 / 39.549	Complex
`TkA04G326790`	`LXL04_037578`	`JCVI_TKOH_00198`	99.2	100.0 / 100.0	Complex
`TkA04G326810`	`LXL04_037579`	`JCVI_TKOH_00198`	98.9	100.0 / 83.642	Review
`TkA04G326880`	`LXL04_037581`	`JCVI_TKOH_00198`	100.0	48.023 / 25.373	Complex
`TkA04G326930`	`LXL04_037583`	`JCVI_TKOH_00198`	99.0	92.647 / 26.185	Review
`TkA04G326940`	`LXL04_037582`	`JCVI_TKOH_00198`	99.2	77.07 / 65.405	Complex
`TkA04G327060`	`LXL04_037584`	`JCVI_TKOH_00198`	99.1	100.0 / 100.0	Complex
`TkA04G327230`	`LXL04_037586`	`JCVI_TKOH_00198`	99.3	94.04 / 40.87	Review
`TkA04G327270`	`LXL04_037584`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Review
`TkA04G327860`	`LXL04_037591`	`JCVI_TKOH_00198`	100.0	85.161 / 100.0	Review
`TkA04G327950`	`LXL04_037592`	`JCVI_TKOH_00198`	100.0	83.607 / 96.591	Complex
`TkA04G328230`	`LXL04_037598`	`JCVI_TKOH_00198`	95.3	83.497 / 100.0	Strict
`TkA04G328240`	`LXL04_037599`	`JCVI_TKOH_00198`	97.6	80.784 / 88.034	Strict
`TkA04G328260`	`LXL04_037602`	`JCVI_TKOH_00198`	99.3	64.255 / 52.448	Complex
`TkA04G328590`	`LXL04_037603`	`JCVI_TKOH_00198`	89.1	100.0 / 100.0	Review
`TkA04G328600`	`LXL04_037604`	`JCVI_TKOH_00198`	98.9	97.077 / 59.189	Review
`TkA04G328610`	`LXL04_037605`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G328720`	`LXL04_037606`	`JCVI_TKOH_00198`	100.0	64.167 / 36.493	Complex
`TkA04G328880`	`LXL04_037607`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Complex
`TkA04G328970`	`LXL04_037609`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Review
`TkA04G329120`	`LXL04_037611`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Complex
`TkA04G329140`	`LXL04_037613`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Strict
`TkA04G330400`	`LXL04_037618`	`JCVI_TKOH_00198`	99.7	100.0 / 100.0	Complex
`TkA04G331010`	`LXL04_037618`	`JCVI_TKOH_00198`	100.0	100.0 / 100.0	Review
`TkA04G331900`	`LXL04_037616`	`JCVI_TKOH_00198`	100.0	97.842 / 69.036	Review
`TkA04G332360`	`LXL04_037613`	`JCVI_TKOH_00198`	97.8	97.157 / 49.204	Review