Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00190
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 189
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00190

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00190 Chr04 17247620-23101011 Chr08 32984824-37790865 mixed High 189 anchors
Chr04 17247620-23101011 Chr08 32984824-37790865 JCVI_TKOH_00190 · 189 gene pairs TkA04G064860 | LXL04_036154 | 68.7% | multi_source_to_OH1004 | Complex TkA04G064880 | LXL04_036156 | 97.6% | multi_source_to_OH1004 | Complex TkA04G065100 | LXL04_036159 | 100.0% | multi_source_to_OH1004 | Complex TkA04G065110 | LXL04_036160 | 100.0% | multi_source_to_OH1004 | Complex TkA04G066840 | LXL04_036164 | 97.2% | sequence_supported_annotation_or_model_conflict | Review TkA04G066860 | LXL04_036165 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA04G066890 | LXL04_036166 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA04G066910 | LXL04_036167 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA04G067200 | LXL04_036168 | 93.9% | multi_source_to_OH1004 | Complex TkA04G067350 | LXL04_036173 | 95.9% | RBH_high_identity_coverage_synteny | Strict TkA04G067440 | LXL04_036174 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA04G067450 | LXL04_036175 | 97.8% | RBH_high_identity_coverage_synteny | Strict
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00190 Chr04:17247620-23101011 Chr08:32984824-37790865 mixed 189 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 189 · Showing 1–189 · Page 1/1

TkA04G064860 → LXL04_036154
68.7%
TkA04G064880 → LXL04_036156
97.6%
TkA04G065100 → LXL04_036159
100.0%
TkA04G065110 → LXL04_036160
100.0%
TkA04G066840 → LXL04_036164
97.2%
TkA04G066860 → LXL04_036165
100.0%
TkA04G066890 → LXL04_036166
100.0%
TkA04G066910 → LXL04_036167
100.0%
TkA04G067200 → LXL04_036168
93.9%
TkA04G067350 → LXL04_036173
95.9%
TkA04G067440 → LXL04_036174
100.0%
TkA04G067450 → LXL04_036175
97.8%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA04G064860LXL04_036154JCVI_TKOH_0019068.797.983 / 99.871Complex
TkA04G064880LXL04_036156JCVI_TKOH_0019097.694.101 / 93.315Complex
TkA04G065100LXL04_036159JCVI_TKOH_00190100.0100.0 / 100.0Complex
TkA04G065110LXL04_036160JCVI_TKOH_00190100.0100.0 / 100.0Complex
TkA04G066840LXL04_036164JCVI_TKOH_0019097.297.514 / 46.023Review
TkA04G066860LXL04_036165JCVI_TKOH_00190100.0100.0 / 100.0Review
TkA04G066890LXL04_036166JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G066910LXL04_036167JCVI_TKOH_00190100.087.417 / 21.394Review
TkA04G067200LXL04_036168JCVI_TKOH_0019093.9100.0 / 100.0Complex
TkA04G067350LXL04_036173JCVI_TKOH_0019095.9100.0 / 100.0Strict
TkA04G067440LXL04_036174JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G067450LXL04_036175JCVI_TKOH_0019097.8100.0 / 100.0Strict
TkA04G067470LXL04_036176JCVI_TKOH_0019099.4100.0 / 100.0Strict
TkA04G067500LXL04_036177JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G067520LXL04_036178JCVI_TKOH_0019097.699.437 / 79.002Probable
TkA04G067610LXL04_036180JCVI_TKOH_0019098.3100.0 / 100.0Strict
TkA04G067620LXL04_036181JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G067690LXL04_036182JCVI_TKOH_0019094.6100.0 / 94.845Probable
TkA04G067940LXL04_036183JCVI_TKOH_00190100.0100.0 / 58.523Review
TkA04G067970LXL04_036184JCVI_TKOH_0019098.2100.0 / 100.0Strict
TkA04G068020LXL04_036186JCVI_TKOH_0019099.4100.0 / 100.0Strict
TkA04G068280LXL04_036187JCVI_TKOH_00190100.0100.0 / 78.199Complex
TkA04G068290LXL04_036188JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G068350LXL04_036189JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G068410LXL04_036190JCVI_TKOH_00190100.0100.0 / 100.0Complex
TkA04G068420LXL04_036191JCVI_TKOH_0019096.2100.0 / 100.0Complex
TkA04G068550LXL04_036192JCVI_TKOH_0019089.8100.0 / 100.0Review
TkA04G068560LXL04_036193JCVI_TKOH_0019089.295.062 / 77.389Review
TkA04G068630LXL04_036194JCVI_TKOH_0019094.498.425 / 30.562Complex
TkA04G068650LXL04_036195JCVI_TKOH_0019089.0100.0 / 94.884Complex
TkA04G068660LXL04_036196JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G068710LXL04_036168JCVI_TKOH_0019088.565.401 / 100.0Complex
TkA04G068900LXL04_036166JCVI_TKOH_00190100.0100.0 / 41.031Review
TkA04G069160LXL04_036164JCVI_TKOH_0019096.397.514 / 46.023Review
TkA04G070310LXL04_036160JCVI_TKOH_00190100.0100.0 / 100.0Complex
TkA04G070320LXL04_036159JCVI_TKOH_00190100.0100.0 / 100.0Complex
TkA04G070390LXL04_036156JCVI_TKOH_0019097.694.101 / 93.315Complex
TkA04G070420LXL04_036154JCVI_TKOH_0019068.497.983 / 99.871Complex
TkA04G070750LXL04_036154JCVI_TKOH_0019076.199.415 / 99.743Complex
TkA04G070880LXL04_036154JCVI_TKOH_0019092.3100.0 / 69.794Complex
TkA04G070970LXL04_036154JCVI_TKOH_0019094.397.541 / 97.172Complex
TkA04G070980LXL04_036153JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G071020LXL04_036152JCVI_TKOH_0019099.3100.0 / 100.0Strict
TkA04G071200LXL04_036151JCVI_TKOH_00190100.0100.0 / 100.0Complex
TkA04G071300LXL04_036150JCVI_TKOH_00190100.096.063 / 81.696Complex
TkA04G071370LXL04_036149JCVI_TKOH_0019088.4100.0 / 100.0Review
TkA04G071390LXL04_036147JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G071550LXL04_036145JCVI_TKOH_0019098.4100.0 / 81.579Strict
TkA04G071600LXL04_036143JCVI_TKOH_0019094.0100.0 / 100.0Probable
TkA04G071860LXL04_036142JCVI_TKOH_0019073.071.014 / 52.717Complex
TkA04G071870LXL04_036140JCVI_TKOH_0019085.599.843 / 87.737Review
TkA04G071890LXL04_036139JCVI_TKOH_00190100.0100.0 / 100.0Review
TkA04G072540LXL04_036137JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G072550LXL04_036136JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G072630LXL04_036134JCVI_TKOH_0019098.6100.0 / 80.46Strict
TkA04G072650LXL04_036133JCVI_TKOH_0019099.7100.0 / 100.0Strict
TkA04G072850LXL04_036129JCVI_TKOH_0019099.899.065 / 39.671Review
TkA04G072900LXL04_036128JCVI_TKOH_0019099.9100.0 / 100.0Complex
TkA04G073080LXL04_036127JCVI_TKOH_0019099.7100.0 / 100.0Complex
TkA04G073510LXL04_036125JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G073520LXL04_036124JCVI_TKOH_0019097.6100.0 / 100.0Strict
TkA04G073530LXL04_036123JCVI_TKOH_0019070.9100.0 / 100.0Review
TkA04G073540LXL04_036122JCVI_TKOH_0019082.884.848 / 91.228Review
TkA04G073590LXL04_036121JCVI_TKOH_0019099.097.03 / 59.878Review
TkA04G073680LXL04_036120JCVI_TKOH_0019099.695.862 / 77.437Complex
TkA04G073730LXL04_036119JCVI_TKOH_00190100.0100.0 / 100.0Review
TkA04G074030LXL04_036117JCVI_TKOH_0019099.3100.0 / 100.0Complex
TkA04G074040LXL04_036116JCVI_TKOH_0019097.693.115 / 46.713Review
TkA04G074260LXL04_036114JCVI_TKOH_00190100.0100.0 / 64.202Review
TkA04G074340LXL04_036113JCVI_TKOH_0019098.6100.0 / 100.0Strict
TkA04G074350LXL04_036112JCVI_TKOH_00190100.0100.0 / 100.0Complex
TkA04G074520LXL04_036111JCVI_TKOH_0019094.996.853 / 51.391Review
TkA04G074770LXL04_036109JCVI_TKOH_0019096.384.375 / 30.252Complex
TkA04G074920LXL04_036099JCVI_TKOH_0019078.295.584 / 72.5Complex
TkA04G075180LXL04_036108JCVI_TKOH_0019076.797.329 / 47.865Complex
TkA04G075290LXL04_036098JCVI_TKOH_0019075.5100.0 / 46.765Complex
TkA04G076010LXL04_036099JCVI_TKOH_0019096.696.919 / 73.2Complex
TkA04G076030LXL04_036098JCVI_TKOH_0019099.7100.0 / 100.0Complex
TkA04G076040LXL04_036097JCVI_TKOH_0019097.196.167 / 70.408Complex
TkA04G076360LXL04_036093JCVI_TKOH_0019089.196.899 / 49.866Complex
TkA04G076370LXL04_036095JCVI_TKOH_00190100.0100.0 / 31.233Review
TkA04G076430LXL04_036093JCVI_TKOH_0019099.8100.0 / 80.749Review
TkA04G076450LXL04_036092JCVI_TKOH_0019057.1100.0 / 98.893Review
TkA04G076490LXL04_036091JCVI_TKOH_0019093.378.863 / 92.199Complex
TkA04G076570LXL04_036090JCVI_TKOH_0019099.685.494 / 96.853Review
TkA04G076600LXL04_036088JCVI_TKOH_00190100.075.926 / 42.123Review
TkA04G076680LXL04_036085JCVI_TKOH_0019044.198.605 / 99.127Complex
TkA04G076690LXL04_036087JCVI_TKOH_0019096.1100.0 / 94.239Strict
TkA04G076770LXL04_036085JCVI_TKOH_0019051.1100.0 / 96.507Complex
TkA04G076800LXL04_036085JCVI_TKOH_00190100.0100.0 / 100.0Review
TkA04G076810LXL04_036084JCVI_TKOH_0019091.699.432 / 97.449Review
TkA04G076830LXL04_036085JCVI_TKOH_0019044.998.605 / 99.127Complex
TkA04G076840LXL04_036087JCVI_TKOH_00190100.092.683 / 46.914Review
TkA04G076850LXL04_036088JCVI_TKOH_00190100.075.926 / 42.123Complex
TkA04G076880LXL04_036090JCVI_TKOH_0019099.385.231 / 96.853Complex
TkA04G076910LXL04_036091JCVI_TKOH_0019098.090.909 / 26.596Review
TkA04G077130LXL04_036085JCVI_TKOH_0019056.397.423 / 82.969Complex
TkA04G077160LXL04_036083JCVI_TKOH_00190100.0100.0 / 44.638Review
TkA04G077180LXL04_036082JCVI_TKOH_0019099.8100.0 / 100.0Strict
TkA04G077370LXL04_036080JCVI_TKOH_00190100.0100.0 / 64.796Review
TkA04G077900LXL04_036079JCVI_TKOH_0019099.7100.0 / 66.284Review
TkA04G077910LXL04_036078JCVI_TKOH_0019096.6100.0 / 100.0Strict
TkA04G078030LXL04_036043JCVI_TKOH_0019098.5100.0 / 100.0Complex
TkA04G078180LXL04_036045JCVI_TKOH_0019091.549.474 / 20.302Complex
TkA04G078230LXL04_036046JCVI_TKOH_0019082.588.387 / 33.286Complex
TkA04G078270LXL04_036047JCVI_TKOH_00190100.0100.0 / 100.0Complex
TkA04G078280LXL04_036048JCVI_TKOH_00190100.0100.0 / 100.0Complex
TkA04G078320LXL04_036049JCVI_TKOH_0019054.8100.0 / 100.0Complex
TkA04G078440LXL04_036054JCVI_TKOH_0019046.593.354 / 99.231Complex
TkA04G078980LXL04_036049JCVI_TKOH_0019078.096.774 / 89.771Complex
TkA04G079050LXL04_036054JCVI_TKOH_0019082.098.762 / 79.808Complex
TkA04G079060LXL04_036055JCVI_TKOH_00190100.0100.0 / 95.116Review
TkA04G079100LXL04_036056JCVI_TKOH_00190100.0100.0 / 100.0Review
TkA04G079120LXL04_036055JCVI_TKOH_0019064.890.37 / 28.372Complex
TkA04G079140LXL04_036055JCVI_TKOH_0019068.799.755 / 91.628Complex
TkA04G079160LXL04_036057JCVI_TKOH_0019099.8100.0 / 100.0Strict
TkA04G079180LXL04_036058JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G079400LXL04_036059JCVI_TKOH_0019089.1100.0 / 100.0Complex
TkA04G079560LXL04_036062JCVI_TKOH_0019091.896.398 / 97.424Complex
TkA04G079570LXL04_036061JCVI_TKOH_0019099.2100.0 / 100.0Review
TkA04G079890LXL04_036066JCVI_TKOH_0019096.1100.0 / 35.478Review
TkA04G080280LXL04_036070JCVI_TKOH_0019099.4100.0 / 100.0Strict
TkA04G080470LXL04_036072JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G080530LXL04_036074JCVI_TKOH_0019099.4100.0 / 100.0Strict
TkA04G080550LXL04_036075JCVI_TKOH_00190100.097.04 / 92.54Strict
TkA04G080900LXL04_036093JCVI_TKOH_0019087.9100.0 / 80.749Complex
TkA04G080970LXL04_036062JCVI_TKOH_0019090.196.398 / 97.424Complex
TkA04G080980LXL04_036061JCVI_TKOH_0019098.9100.0 / 100.0Review
TkA04G081020LXL04_036059JCVI_TKOH_0019086.9100.0 / 100.0Complex
TkA04G081200LXL04_036058JCVI_TKOH_00190100.089.272 / 45.155Review
TkA04G081210LXL04_036057JCVI_TKOH_00190100.097.312 / 29.672Review
TkA04G081230LXL04_036055JCVI_TKOH_0019041.899.535 / 86.744Complex
TkA04G081260LXL04_036055JCVI_TKOH_0019064.788.696 / 23.721Complex
TkA04G081280LXL04_036056JCVI_TKOH_0019098.9100.0 / 62.877Complex
TkA04G081370LXL04_036055JCVI_TKOH_0019099.5100.0 / 95.116Review
TkA04G081400LXL04_036054JCVI_TKOH_0019051.6100.0 / 100.0Complex
TkA04G081450LXL04_036049JCVI_TKOH_0019045.170.989 / 58.554Complex
TkA04G081680LXL04_036049JCVI_TKOH_0019053.096.143 / 97.795Complex
TkA04G081710LXL04_036048JCVI_TKOH_0019099.4100.0 / 100.0Complex
TkA04G081720LXL04_036047JCVI_TKOH_0019099.9100.0 / 100.0Complex
TkA04G081960LXL04_036046JCVI_TKOH_0019086.450.0 / 44.711Review
TkA04G081990LXL04_036046JCVI_TKOH_0019085.488.387 / 33.286Complex
TkA04G082000LXL04_036045JCVI_TKOH_0019086.0100.0 / 100.0Review
TkA04G082240LXL04_036043JCVI_TKOH_0019099.6100.0 / 100.0Complex
TkA04G082280LXL04_036042JCVI_TKOH_0019099.6100.0 / 100.0Strict
TkA04G082290LXL04_036041JCVI_TKOH_0019079.899.465 / 34.608Review
TkA04G082310LXL04_036047JCVI_TKOH_0019093.4100.0 / 100.0Complex
TkA04G082380LXL04_036038JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G082550LXL04_036036JCVI_TKOH_0019082.0100.0 / 100.0Review
TkA04G083020LXL04_036034JCVI_TKOH_0019089.9100.0 / 100.0Complex
TkA04G083070LXL04_036033JCVI_TKOH_0019099.7100.0 / 86.265Complex
TkA04G083110LXL04_036032JCVI_TKOH_0019076.7100.0 / 100.0Review
TkA04G083170LXL04_036031JCVI_TKOH_0019083.395.98 / 49.087Complex
TkA04G083190LXL04_036030JCVI_TKOH_0019098.895.539 / 55.87Review
TkA04G083420LXL04_036024JCVI_TKOH_0019096.486.822 / 12.161Review
TkA04G083790LXL04_036025JCVI_TKOH_0019099.8100.0 / 77.572Complex
TkA04G083820LXL04_036024JCVI_TKOH_0019099.793.797 / 41.042Review
TkA04G083880LXL04_036024JCVI_TKOH_0019093.276.033 / 30.076Complex
TkA04G083950LXL04_036021JCVI_TKOH_0019095.5100.0 / 100.0Review
TkA04G084030LXL04_036020JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G084200LXL04_036018JCVI_TKOH_0019098.6100.0 / 100.0Complex
TkA04G084220LXL04_036017JCVI_TKOH_0019098.392.81 / 89.72Strict
TkA04G084230LXL04_036016JCVI_TKOH_0019098.6100.0 / 55.644Review
TkA04G084250LXL04_036015JCVI_TKOH_0019098.2100.0 / 42.714Review
TkA04G084270LXL04_036014JCVI_TKOH_0019094.4100.0 / 95.575Probable
TkA04G084400LXL04_036011JCVI_TKOH_0019094.988.65 / 85.965Probable
TkA04G084480LXL04_036010JCVI_TKOH_0019098.892.188 / 41.785Review
TkA04G084570LXL04_036012JCVI_TKOH_0019080.467.832 / 42.731Review
TkA04G084590LXL04_036008JCVI_TKOH_00190100.0100.0 / 100.0Review
TkA04G084620LXL04_036007JCVI_TKOH_00190100.0100.0 / 100.0Complex
TkA04G084630LXL04_036006JCVI_TKOH_00190100.0100.0 / 94.471Complex
TkA04G084640LXL04_036005JCVI_TKOH_0019096.493.558 / 37.286Review
TkA04G084650LXL04_036005JCVI_TKOH_0019099.7100.0 / 21.394Review
TkA04G084920LXL04_036010JCVI_TKOH_0019071.399.367 / 36.402Complex
TkA04G084970LXL04_036004JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G085020LXL04_036003JCVI_TKOH_0019098.5100.0 / 79.518Probable
TkA04G086020LXL04_036000JCVI_TKOH_0019099.3100.0 / 100.0Review
TkA04G086030LXL04_035999JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G086330LXL04_035965JCVI_TKOH_0019095.1100.0 / 70.694Probable
TkA04G086370LXL04_035966JCVI_TKOH_0019099.5100.0 / 96.154Strict
TkA04G086380LXL04_035967JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G087230LXL04_035975JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G087700LXL04_035979JCVI_TKOH_00190100.0100.0 / 36.526Review
TkA04G088070LXL04_035981JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G088140LXL04_035982JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G088220LXL04_035985JCVI_TKOH_00190100.0100.0 / 100.0Strict
TkA04G088230LXL04_035986JCVI_TKOH_0019099.2100.0 / 100.0Strict
TkA04G088250LXL04_035988JCVI_TKOH_00190100.0100.0 / 100.0Complex
TkA04G088330LXL04_035991JCVI_TKOH_0019099.1100.0 / 62.573Complex