Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00091
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 26
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00091The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00091 |
Chr02:115245217-116084689 | Chr03:40652569-41487364 | mixed | 26 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 26 · Showing 1–26 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA02G452870 | LXL04_014063 | JCVI_TKOH_00091 | 100.0 | 100.0 / 100.0 | Strict |
TkA02G452950 | LXL04_014062 | JCVI_TKOH_00091 | 100.0 | 100.0 / 67.624 | Review |
TkA02G452970 | LXL04_014061 | JCVI_TKOH_00091 | 92.0 | 100.0 / 100.0 | Complex |
TkA02G453080 | LXL04_014059 | JCVI_TKOH_00091 | 100.0 | 98.621 / 58.367 | Review |
TkA02G453100 | LXL04_014058 | JCVI_TKOH_00091 | 100.0 | 100.0 / 100.0 | Strict |
TkA02G453270 | LXL04_014056 | JCVI_TKOH_00091 | 93.6 | 100.0 / 100.0 | Probable |
TkA02G453540 | LXL04_014051 | JCVI_TKOH_00091 | 100.0 | 100.0 / 33.444 | Review |
TkA02G453550 | LXL04_014051 | JCVI_TKOH_00091 | 94.5 | 67.593 / 12.146 | Complex |
TkA02G453560 | LXL04_014050 | JCVI_TKOH_00091 | 100.0 | 100.0 / 100.0 | Strict |
TkA02G453590 | LXL04_014049 | JCVI_TKOH_00091 | 99.8 | 100.0 / 100.0 | Strict |
TkA02G453630 | LXL04_014048 | JCVI_TKOH_00091 | 99.7 | 100.0 / 100.0 | Complex |
TkA02G453920 | LXL04_014044 | JCVI_TKOH_00091 | 84.0 | 100.0 / 100.0 | Complex |
TkA02G453930 | LXL04_014043 | JCVI_TKOH_00091 | 79.5 | 100.0 / 100.0 | Review |
TkA02G453980 | LXL04_014042 | JCVI_TKOH_00091 | 100.0 | 93.651 / 59.596 | Review |
TkA02G454070 | LXL04_014041 | JCVI_TKOH_00091 | 99.5 | 90.521 / 100.0 | Strict |
TkA02G454090 | LXL04_014040 | JCVI_TKOH_00091 | 100.0 | 99.771 / 95.395 | Strict |
TkA02G454120 | LXL04_014038 | JCVI_TKOH_00091 | 100.0 | 63.964 / 25.725 | Review |
TkA02G454210 | LXL04_014034 | JCVI_TKOH_00091 | 99.6 | 100.0 / 100.0 | Complex |
TkA02G454290 | LXL04_014032 | JCVI_TKOH_00091 | 91.7 | 100.0 / 94.087 | Probable |
TkA02G454550 | LXL04_014029 | JCVI_TKOH_00091 | 100.0 | 100.0 / 100.0 | Strict |
TkA02G454570 | LXL04_014028 | JCVI_TKOH_00091 | 100.0 | 100.0 / 100.0 | Strict |
TkA02G455250 | LXL04_014027 | JCVI_TKOH_00091 | 98.0 | 100.0 / 100.0 | Strict |
TkA02G455650 | LXL04_014021 | JCVI_TKOH_00091 | 88.1 | 100.0 / 100.0 | Review |
TkA02G455800 | LXL04_014020 | JCVI_TKOH_00091 | 96.5 | 100.0 / 100.0 | Strict |
TkA02G455810 | LXL04_014019 | JCVI_TKOH_00091 | 99.1 | 100.0 / 86.437 | Strict |
TkA02G455820 | LXL04_014018 | JCVI_TKOH_00091 | 93.8 | 99.121 / 47.199 | Review |