同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00260
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 41
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00260

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00260 Chr06 2547833-3118928 Chr05 126226324-126949061 mixed High 41 anchors
Chr06 2547833-3118928 Chr05 126226324-126949061 JCVI_TKOH_00260 · 41 gene pairs TkA06G009940 | LXL04_026432 | 89.3% | non_reciprocal_best_hit | Complex TkA06G009980 | LXL04_026434 | 99.7% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA06G009990 | LXL04_026435 | 96.8% | sequence_supported_annotation_or_model_conflict | Review TkA06G010110 | LXL04_026436 | 97.1% | non_reciprocal_best_hit | Complex TkA06G010120 | LXL04_026436 | 93.0% | non_reciprocal_best_hit | Complex TkA06G010170 | LXL04_026437 | 86.5% | multi_candidate_from_TK1151 | Complex TkA06G010380 | LXL04_026439 | 97.8% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA06G010400 | LXL04_026440 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA06G010470 | LXL04_026442 | 100.0% | multi_source_to_OH1004 | Complex TkA06G010510 | LXL04_026443 | 99.9% | RBH_high_identity_coverage_synteny | Strict TkA06G010530 | LXL04_026444 | 99.8% | multi_source_to_OH1004 | Complex TkA06G010580 | LXL04_026447 | 100.0% | RBH_high_identity_coverage_synteny | Strict
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00260 Chr06:2547833-3118928 Chr05:126226324-126949061 mixed 41 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 41 · 当前范围 1–41 · 页码 1/1

TkA06G009940 → LXL04_026432
89.3%
TkA06G009980 → LXL04_026434
99.7%
TkA06G009990 → LXL04_026435
96.8%
TkA06G010110 → LXL04_026436
97.1%
TkA06G010120 → LXL04_026436
93.0%
TkA06G010170 → LXL04_026437
86.5%
TkA06G010380 → LXL04_026439
97.8%
TkA06G010400 → LXL04_026440
100.0%
TkA06G010470 → LXL04_026442
100.0%
TkA06G010510 → LXL04_026443
99.9%
TkA06G010530 → LXL04_026444
99.8%
TkA06G010580 → LXL04_026447
100.0%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA06G009940LXL04_026432JCVI_TKOH_0026089.3100.0 / 57.5Complex
TkA06G009980LXL04_026434JCVI_TKOH_0026099.7100.0 / 100.0待复核
TkA06G009990LXL04_026435JCVI_TKOH_0026096.899.365 / 35.108待复核
TkA06G010110LXL04_026436JCVI_TKOH_0026097.1100.0 / 100.0Complex
TkA06G010120LXL04_026436JCVI_TKOH_0026093.0100.0 / 100.0Complex
TkA06G010170LXL04_026437JCVI_TKOH_0026086.582.687 / 100.0Complex
TkA06G010380LXL04_026439JCVI_TKOH_0026097.863.571 / 18.313待复核
TkA06G010400LXL04_026440JCVI_TKOH_00260100.094.958 / 20.849待复核
TkA06G010470LXL04_026442JCVI_TKOH_00260100.0100.0 / 100.0Complex
TkA06G010510LXL04_026443JCVI_TKOH_0026099.9100.0 / 100.0Strict
TkA06G010530LXL04_026444JCVI_TKOH_0026099.895.01 / 97.633Complex
TkA06G010580LXL04_026447JCVI_TKOH_00260100.0100.0 / 100.0Strict
TkA06G010600LXL04_026448JCVI_TKOH_0026099.8100.0 / 100.0Strict
TkA06G010610LXL04_026449JCVI_TKOH_00260100.0100.0 / 100.0待复核
TkA06G010620LXL04_026450JCVI_TKOH_00260100.0100.0 / 95.108Strict
TkA06G010730LXL04_026451JCVI_TKOH_0026096.0100.0 / 100.0Strict
TkA06G010740LXL04_026452JCVI_TKOH_0026079.184.038 / 67.474Complex
TkA06G010760LXL04_026453JCVI_TKOH_0026098.397.776 / 74.537Probable
TkA06G010800LXL04_026454JCVI_TKOH_00260100.0100.0 / 100.0Complex
TkA06G010950LXL04_026458JCVI_TKOH_0026098.294.958 / 99.123待复核
TkA06G011040LXL04_026459JCVI_TKOH_0026099.4100.0 / 100.0Strict
TkA06G011110LXL04_026462JCVI_TKOH_0026082.493.117 / 29.715Complex
TkA06G011120LXL04_026462JCVI_TKOH_00260100.049.339 / 12.281Complex
TkA06G011210LXL04_026463JCVI_TKOH_0026094.9100.0 / 100.0Probable
TkA06G011220LXL04_026465JCVI_TKOH_0026096.0100.0 / 100.0Complex
TkA06G011240LXL04_026465JCVI_TKOH_0026064.185.714 / 98.99Complex
TkA06G011460LXL04_026465JCVI_TKOH_0026064.296.732 / 99.663Complex
TkA06G011480LXL04_026466JCVI_TKOH_0026086.6100.0 / 24.969Complex
TkA06G011520LXL04_026466JCVI_TKOH_00260100.0100.0 / 39.13待复核
TkA06G011530LXL04_026467JCVI_TKOH_00260100.094.286 / 13.769待复核
TkA06G011570LXL04_026467JCVI_TKOH_0026033.888.742 / 47.149Complex
TkA06G011580LXL04_026468JCVI_TKOH_0026088.691.713 / 41.412待复核
TkA06G011700LXL04_026470JCVI_TKOH_0026099.7100.0 / 100.0Strict
TkA06G011720LXL04_026471JCVI_TKOH_0026097.481.283 / 27.636待复核
TkA06G011740LXL04_026472JCVI_TKOH_0026069.0100.0 / 100.0待复核
TkA06G011750LXL04_026473JCVI_TKOH_0026099.2100.0 / 100.0Strict
TkA06G011790LXL04_026475JCVI_TKOH_0026099.2100.0 / 100.0Strict
TkA06G011810LXL04_026476JCVI_TKOH_0026099.1100.0 / 57.216待复核
TkA06G011820LXL04_026477JCVI_TKOH_0026099.7100.0 / 100.0Strict
TkA06G011830LXL04_026478JCVI_TKOH_00260100.0100.0 / 100.0Complex
TkA06G011860LXL04_026480JCVI_TKOH_0026098.4100.0 / 75.153Probable