Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00021
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 18
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00021The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00021 |
Chr01:80288685-83233608 | Chr01:86285056-89975884 | mixed | 18 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 18 · Showing 1–18 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA01G322930 | LXL04_003633 | JCVI_TKOH_00021 | 99.4 | 100.0 / 100.0 | Complex |
TkA01G322990 | LXL04_003633 | JCVI_TKOH_00021 | 99.3 | 100.0 / 100.0 | Complex |
TkA01G324510 | LXL04_003614 | JCVI_TKOH_00021 | 100.0 | 98.701 / 24.281 | Review |
TkA01G324550 | LXL04_003612 | JCVI_TKOH_00021 | 97.0 | 100.0 / 100.0 | Complex |
TkA01G324610 | LXL04_003611 | JCVI_TKOH_00021 | 100.0 | 100.0 / 92.25 | Strict |
TkA01G325430 | LXL04_003609 | JCVI_TKOH_00021 | 100.0 | 100.0 / 86.357 | Complex |
TkA01G325620 | LXL04_003608 | JCVI_TKOH_00021 | 100.0 | 100.0 / 100.0 | Strict |
TkA01G327580 | LXL04_003605 | JCVI_TKOH_00021 | 98.8 | 100.0 / 75.771 | Complex |
TkA01G331540 | LXL04_003591 | JCVI_TKOH_00021 | 100.0 | 100.0 / 71.642 | Complex |
TkA01G332340 | LXL04_003588 | JCVI_TKOH_00021 | 98.4 | 100.0 / 100.0 | Strict |
TkA01G333210 | LXL04_003582 | JCVI_TKOH_00021 | 98.8 | 100.0 / 100.0 | Strict |
TkA01G333250 | LXL04_003580 | JCVI_TKOH_00021 | 94.3 | 99.496 / 99.329 | Complex |
TkA01G333350 | LXL04_003580 | JCVI_TKOH_00021 | 96.5 | 100.0 / 100.0 | Complex |
TkA01G334440 | LXL04_003575 | JCVI_TKOH_00021 | 94.1 | 100.0 / 100.0 | Complex |
TkA01G334450 | LXL04_003574 | JCVI_TKOH_00021 | 91.4 | 55.311 / 35.782 | Review |
TkA01G334940 | LXL04_003571 | JCVI_TKOH_00021 | 100.0 | 100.0 / 98.284 | Strict |
TkA01G334950 | LXL04_003570 | JCVI_TKOH_00021 | 99.3 | 100.0 / 100.0 | Strict |
TkA01G335080 | LXL04_003567 | JCVI_TKOH_00021 | 78.1 | 100.0 / 100.0 | Review |