同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00143
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 256
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00143

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00143 Chr03 80926408-93928728 Chr02 97361592-109750028 mixed High 56 anchors
Chr03 80926408-93928728 Chr02 97361592-109750028 JCVI_TKOH_00143 · 256 gene pairs TkA03G370570 | LXL04_008458 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA03G370740 | LXL04_008457 | 90.5% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA03G371000 | LXL04_008454 | 54.8% | non_reciprocal_best_hit | Complex TkA03G371290 | LXL04_008453 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA03G371340 | LXL04_008452 | 98.5% | RBH_high_identity_coverage_synteny | Strict TkA03G371400 | LXL04_008451 | 97.5% | sequence_supported_annotation_or_model_conflict | Review TkA03G371460 | LXL04_008449 | 98.6% | RBH_sequence_supported | Probable TkA03G371610 | LXL04_008445 | 92.7% | RBH_sequence_supported | Probable TkA03G371870 | LXL04_008442 | 97.8% | RBH_high_identity_coverage_synteny | Strict TkA03G371950 | LXL04_008440 | 100.0% | multi_candidate_from_TK1151 | Complex TkA03G371980 | LXL04_008438 | 95.4% | RBH_high_identity_coverage_synteny | Strict TkA03G371990 | LXL04_008436 | 100.0% | RBH_high_identity_coverage_synteny | Strict
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00143 Chr03:80926408-93928728 Chr02:97361592-109750028 mixed 256 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 256 · 当前范围 201–256 · 页码 2/2

TkA03G370570 → LXL04_008458
100.0%
TkA03G370740 → LXL04_008457
90.5%
TkA03G371000 → LXL04_008454
54.8%
TkA03G371290 → LXL04_008453
100.0%
TkA03G371340 → LXL04_008452
98.5%
TkA03G371400 → LXL04_008451
97.5%
TkA03G371460 → LXL04_008449
98.6%
TkA03G371610 → LXL04_008445
92.7%
TkA03G371870 → LXL04_008442
97.8%
TkA03G371950 → LXL04_008440
100.0%
TkA03G371980 → LXL04_008438
95.4%
TkA03G371990 → LXL04_008436
100.0%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA03G370570LXL04_008458JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G370740LXL04_008457JCVI_TKOH_0014390.558.333 / 42.568待复核
TkA03G371000LXL04_008454JCVI_TKOH_0014354.838.389 / 18.341Complex
TkA03G371290LXL04_008453JCVI_TKOH_00143100.0100.0 / 42.339待复核
TkA03G371340LXL04_008452JCVI_TKOH_0014398.5100.0 / 100.0Strict
TkA03G371400LXL04_008451JCVI_TKOH_0014397.593.19 / 54.175待复核
TkA03G371460LXL04_008449JCVI_TKOH_0014398.677.095 / 86.52Probable
TkA03G371610LXL04_008445JCVI_TKOH_0014392.7100.0 / 100.0Probable
TkA03G371870LXL04_008442JCVI_TKOH_0014397.8100.0 / 100.0Strict
TkA03G371950LXL04_008440JCVI_TKOH_00143100.0100.0 / 100.0Complex
TkA03G371980LXL04_008438JCVI_TKOH_0014395.4100.0 / 99.769Strict
TkA03G371990LXL04_008436JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G372000LXL04_008435JCVI_TKOH_00143100.0100.0 / 100.0Strict
TkA03G372580LXL04_008432JCVI_TKOH_0014387.089.305 / 82.143待复核
TkA03G372970LXL04_008430JCVI_TKOH_0014393.7100.0 / 100.0Probable
TkA03G373000LXL04_008425JCVI_TKOH_0014382.2100.0 / 80.928Complex
TkA03G373070LXL04_008425JCVI_TKOH_0014389.2100.0 / 100.0Complex
TkA03G373120LXL04_008424JCVI_TKOH_0014389.1100.0 / 100.0Complex
TkA03G373410LXL04_008422JCVI_TKOH_0014399.4100.0 / 100.0待复核
TkA03G373570LXL04_008422JCVI_TKOH_0014388.4100.0 / 100.0Complex
TkA03G373830LXL04_008420JCVI_TKOH_0014396.594.821 / 60.175Complex
TkA03G374180LXL04_008417JCVI_TKOH_0014384.1100.0 / 80.513Complex
TkA03G374720LXL04_008411JCVI_TKOH_00143100.094.712 / 32.19待复核
TkA03G375150LXL04_008417JCVI_TKOH_0014382.2100.0 / 80.513Complex
TkA03G376140LXL04_008409JCVI_TKOH_0014399.9100.0 / 100.0Strict
TkA03G376230LXL04_008402JCVI_TKOH_0014399.5100.0 / 100.0Strict
TkA03G376290LXL04_008401JCVI_TKOH_0014397.081.373 / 77.358Probable
TkA03G376300LXL04_008400JCVI_TKOH_0014394.195.385 / 31.366Complex
TkA03G376390LXL04_008400JCVI_TKOH_0014397.097.101 / 55.312待复核
TkA03G376540LXL04_008399JCVI_TKOH_0014395.6100.0 / 100.0Strict
TkA03G376900LXL04_008396JCVI_TKOH_0014380.441.071 / 10.337Complex
TkA03G376980LXL04_008395JCVI_TKOH_0014395.798.807 / 94.893Complex
TkA03G377350LXL04_008394JCVI_TKOH_0014399.6100.0 / 100.0Strict
TkA03G378240LXL04_008393JCVI_TKOH_0014399.9100.0 / 100.0Complex
TkA03G378500LXL04_008392JCVI_TKOH_00143100.099.405 / 87.895Complex
TkA03G378750LXL04_008390JCVI_TKOH_0014389.090.099 / 32.042待复核
TkA03G378850LXL04_008386JCVI_TKOH_0014355.788.235 / 37.589Complex
TkA03G378960LXL04_008388JCVI_TKOH_0014387.5100.0 / 100.0Complex
TkA03G379000LXL04_008388JCVI_TKOH_00143100.0100.0 / 62.997Complex
TkA03G379050LXL04_008387JCVI_TKOH_00143100.0100.0 / 79.487Complex
TkA03G379180LXL04_008380JCVI_TKOH_0014373.093.064 / 49.096Complex
TkA03G379270LXL04_008380JCVI_TKOH_0014370.095.082 / 64.157Complex
TkA03G379410LXL04_008381JCVI_TKOH_0014397.8100.0 / 42.462待复核
TkA03G379470LXL04_008381JCVI_TKOH_0014397.9100.0 / 100.0待复核
TkA03G379830LXL04_008380JCVI_TKOH_0014397.799.254 / 80.12Complex
TkA03G379840LXL04_008381JCVI_TKOH_0014385.6100.0 / 53.231Complex
TkA03G379860LXL04_008381JCVI_TKOH_0014384.567.742 / 25.846Complex
TkA03G379870LXL04_008379JCVI_TKOH_00143100.0100.0 / 100.0Complex
TkA03G380200LXL04_008377JCVI_TKOH_0014389.9100.0 / 100.0待复核
TkA03G380220LXL04_008374JCVI_TKOH_0014367.5100.0 / 100.0Complex
TkA03G380260LXL04_008373JCVI_TKOH_0014398.9100.0 / 100.0Strict
TkA03G380270LXL04_008372JCVI_TKOH_0014398.0100.0 / 100.0Strict
TkA03G380610LXL04_008367JCVI_TKOH_0014399.2100.0 / 100.0Strict
TkA03G380670LXL04_008364JCVI_TKOH_0014396.2100.0 / 100.0Complex
TkA03G380710LXL04_008364JCVI_TKOH_00143100.0100.0 / 100.0Complex
TkA03G380800LXL04_008362JCVI_TKOH_0014380.4100.0 / 60.586待复核