Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00147
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 1292
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00147

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00147 Chr03 114459386-157381471 Chr02 130535972-171456523 mixed High 200 anchors
Chr03 114459386-157381471 Chr02 130535972-171456523 JCVI_TKOH_00147 · 1292 gene pairs TkA03G537390 | LXL04_010620 | 99.8% | RBH_high_identity_coverage_synteny | Strict TkA03G537400 | LXL04_010621 | 100.0% | multi_source_to_OH1004 | Complex TkA03G537420 | LXL04_010641 | 71.6% | non_reciprocal_best_hit | Complex TkA03G537700 | LXL04_010623 | 99.4% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA03G537750 | LXL04_010626 | 52.8% | multi_source_to_OH1004 | Complex TkA03G538050 | LXL04_010626 | 95.8% | multi_source_to_OH1004 | Complex TkA03G538140 | LXL04_010627 | 81.4% | multi_source_to_OH1004 | Complex TkA03G538250 | LXL04_010627 | 99.5% | multi_source_to_OH1004 | Complex TkA03G538620 | LXL04_010630 | 97.7% | RBH_high_identity_coverage_synteny | Strict TkA03G538630 | LXL04_010631 | 99.0% | RBH_high_identity_coverage_synteny | Strict TkA03G538810 | LXL04_010633 | 98.4% | RBH_high_identity_coverage_synteny | Strict TkA03G538910 | LXL04_010635 | 100.0% | multi_source_to_OH1004 | Complex
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00147 Chr03:114459386-157381471 Chr02:130535972-171456523 mixed 1292 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 1292 · Showing 601–800 · Page 4/7

TkA03G537390 → LXL04_010620
99.8%
TkA03G537400 → LXL04_010621
100.0%
TkA03G537420 → LXL04_010641
71.6%
TkA03G537700 → LXL04_010623
99.4%
TkA03G537750 → LXL04_010626
52.8%
TkA03G538050 → LXL04_010626
95.8%
TkA03G538140 → LXL04_010627
81.4%
TkA03G538250 → LXL04_010627
99.5%
TkA03G538620 → LXL04_010630
97.7%
TkA03G538630 → LXL04_010631
99.0%
TkA03G538810 → LXL04_010633
98.4%
TkA03G538910 → LXL04_010635
100.0%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA03G537390LXL04_010620JCVI_TKOH_0014799.8100.0 / 100.0Strict
TkA03G537400LXL04_010621JCVI_TKOH_00147100.098.571 / 94.521Complex
TkA03G537420LXL04_010641JCVI_TKOH_0014771.697.872 / 95.57Complex
TkA03G537700LXL04_010623JCVI_TKOH_0014799.483.415 / 43.959Review
TkA03G537750LXL04_010626JCVI_TKOH_0014752.898.901 / 66.138Complex
TkA03G538050LXL04_010626JCVI_TKOH_0014795.8100.0 / 67.901Complex
TkA03G538140LXL04_010627JCVI_TKOH_0014781.499.782 / 69.453Complex
TkA03G538250LXL04_010627JCVI_TKOH_0014799.5100.0 / 100.0Complex
TkA03G538620LXL04_010630JCVI_TKOH_0014797.7100.0 / 100.0Strict
TkA03G538630LXL04_010631JCVI_TKOH_0014799.0100.0 / 100.0Strict
TkA03G538810LXL04_010633JCVI_TKOH_0014798.499.885 / 99.269Strict
TkA03G538910LXL04_010635JCVI_TKOH_00147100.099.029 / 60.177Complex
TkA03G539660LXL04_010640JCVI_TKOH_0014792.499.12 / 32.413Review
TkA03G539680LXL04_010641JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G539740LXL04_010640JCVI_TKOH_0014761.690.993 / 19.527Complex
TkA03G539750LXL04_010644JCVI_TKOH_0014799.8100.0 / 55.252Review
TkA03G539800LXL04_010645JCVI_TKOH_0014797.999.602 / 51.919Review
TkA03G539870LXL04_010645JCVI_TKOH_0014789.959.732 / 4.616Complex
TkA03G539940LXL04_010646JCVI_TKOH_0014792.399.802 / 46.465Review
TkA03G541180LXL04_010654JCVI_TKOH_0014794.6100.0 / 100.0Probable
TkA03G541210LXL04_010656JCVI_TKOH_00147100.0100.0 / 31.235Review
TkA03G541230LXL04_010657JCVI_TKOH_0014782.799.82 / 64.688Complex
TkA03G541240LXL04_010658JCVI_TKOH_0014798.494.574 / 64.211Complex
TkA03G541710LXL04_010659JCVI_TKOH_0014794.1100.0 / 100.0Probable
TkA03G541820LXL04_010660JCVI_TKOH_0014799.774.148 / 43.073Review
TkA03G541850LXL04_010661JCVI_TKOH_0014798.9100.0 / 86.905Complex
TkA03G541860LXL04_010662JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G541950LXL04_010641JCVI_TKOH_0014777.098.639 / 95.759Complex
TkA03G542170LXL04_010639JCVI_TKOH_0014777.2100.0 / 15.291Complex
TkA03G542230LXL04_010641JCVI_TKOH_0014784.3100.0 / 41.47Complex
TkA03G542290LXL04_010666JCVI_TKOH_00147100.0100.0 / 45.361Review
TkA03G542500LXL04_010673JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G542790LXL04_010676JCVI_TKOH_0014760.8100.0 / 84.589Complex
TkA03G542820LXL04_010678JCVI_TKOH_00147100.0100.0 / 53.623Review
TkA03G542970LXL04_010679JCVI_TKOH_00147100.0100.0 / 98.081Complex
TkA03G543020LXL04_010680JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G543180LXL04_010682JCVI_TKOH_0014791.0100.0 / 100.0Probable
TkA03G543190LXL04_010683JCVI_TKOH_0014794.9100.0 / 100.0Complex
TkA03G543240LXL04_010684JCVI_TKOH_00147100.063.38 / 65.217Complex
TkA03G543260LXL04_010685JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G543340LXL04_010687JCVI_TKOH_0014780.199.747 / 75.917Complex
TkA03G543760LXL04_010689JCVI_TKOH_0014798.295.918 / 43.451Review
TkA03G543770LXL04_010690JCVI_TKOH_0014798.8100.0 / 67.204Review
TkA03G543860LXL04_010693JCVI_TKOH_0014799.291.27 / 100.0Strict
TkA03G544120LXL04_010696JCVI_TKOH_00147100.0100.0 / 90.462Complex
TkA03G544180LXL04_010697JCVI_TKOH_0014787.0100.0 / 100.0Review
TkA03G544200LXL04_010698JCVI_TKOH_0014799.6100.0 / 95.322Strict
TkA03G544210LXL04_010699JCVI_TKOH_0014792.9100.0 / 100.0Probable
TkA03G544410LXL04_010700JCVI_TKOH_0014756.2100.0 / 33.065Complex
TkA03G544460LXL04_010702JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G544470LXL04_010703JCVI_TKOH_00147100.0100.0 / 96.167Strict
TkA03G544500LXL04_010704JCVI_TKOH_00147100.0100.0 / 100.0Review
TkA03G544580LXL04_010706JCVI_TKOH_00147100.069.767 / 57.325Complex
TkA03G544590LXL04_010707JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G544730LXL04_010709JCVI_TKOH_00147100.0100.0 / 73.432Complex
TkA03G544740LXL04_010710JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G544770LXL04_010713JCVI_TKOH_0014799.0100.0 / 100.0Strict
TkA03G544820LXL04_010714JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G544850LXL04_010715JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G544860LXL04_010716JCVI_TKOH_0014799.5100.0 / 100.0Strict
TkA03G544900LXL04_010717JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G544920LXL04_010719JCVI_TKOH_00147100.049.565 / 47.107Review
TkA03G544930LXL04_010723JCVI_TKOH_0014791.099.72 / 99.72Complex
TkA03G545110LXL04_010723JCVI_TKOH_0014799.7100.0 / 100.0Complex
TkA03G545170LXL04_010724JCVI_TKOH_0014798.659.322 / 15.873Complex
TkA03G545210LXL04_010725JCVI_TKOH_0014797.895.139 / 42.812Review
TkA03G545240LXL04_010726JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G545400LXL04_010729JCVI_TKOH_0014795.0100.0 / 100.0Strict
TkA03G545420LXL04_010730JCVI_TKOH_0014799.4100.0 / 100.0Strict
TkA03G545760LXL04_010733JCVI_TKOH_0014787.1100.0 / 100.0Review
TkA03G545780LXL04_010734JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G545800LXL04_010735JCVI_TKOH_0014799.392.971 / 63.665Review
TkA03G545840LXL04_010736JCVI_TKOH_0014797.795.291 / 53.991Review
TkA03G545860LXL04_010738JCVI_TKOH_0014781.7100.0 / 100.0Review
TkA03G545990LXL04_010742JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G546000LXL04_010743JCVI_TKOH_00147100.0100.0 / 67.727Complex
TkA03G546020LXL04_010744JCVI_TKOH_0014764.690.37 / 74.274Complex
TkA03G546030LXL04_010745JCVI_TKOH_0014798.2100.0 / 87.844Review
TkA03G546090LXL04_010747JCVI_TKOH_00147100.099.057 / 69.307Review
TkA03G546340LXL04_010750JCVI_TKOH_0014791.9100.0 / 87.5Complex
TkA03G546830LXL04_010751JCVI_TKOH_0014792.9100.0 / 100.0Complex
TkA03G546950LXL04_010751JCVI_TKOH_0014792.9100.0 / 100.0Complex
TkA03G547370LXL04_010755JCVI_TKOH_0014799.1100.0 / 84.357Strict
TkA03G547380LXL04_010756JCVI_TKOH_0014799.5100.0 / 100.0Strict
TkA03G547460LXL04_010757JCVI_TKOH_0014792.8100.0 / 100.0Probable
TkA03G547550LXL04_010758JCVI_TKOH_0014799.776.413 / 100.0Probable
TkA03G547560LXL04_010759JCVI_TKOH_0014798.097.381 / 94.023Complex
TkA03G547580LXL04_010760JCVI_TKOH_00147100.0100.0 / 47.382Review
TkA03G547770LXL04_010762JCVI_TKOH_0014799.191.821 / 100.0Strict
TkA03G548110LXL04_010765JCVI_TKOH_0014795.595.714 / 40.12Review
TkA03G548270LXL04_010766JCVI_TKOH_0014795.8100.0 / 100.0Complex
TkA03G548980LXL04_010771JCVI_TKOH_00147100.095.489 / 100.0Strict
TkA03G549120LXL04_010790JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G549190LXL04_010791JCVI_TKOH_0014790.9100.0 / 95.169Complex
TkA03G549200LXL04_010792JCVI_TKOH_0014795.8100.0 / 100.0Complex
TkA03G549420LXL04_010795JCVI_TKOH_0014793.367.347 / 61.765Complex
TkA03G549430LXL04_010796JCVI_TKOH_00147100.061.932 / 43.254Review
TkA03G549450LXL04_010797JCVI_TKOH_0014792.597.818 / 23.872Review
TkA03G549500LXL04_010814JCVI_TKOH_0014787.699.774 / 99.942Complex
TkA03G549520LXL04_010801JCVI_TKOH_0014795.1100.0 / 77.119Complex
TkA03G549530LXL04_010800JCVI_TKOH_0014789.199.886 / 99.717Review
TkA03G549670LXL04_010803JCVI_TKOH_0014786.791.163 / 39.914Complex
TkA03G549680LXL04_010800JCVI_TKOH_0014787.599.886 / 99.717Complex
TkA03G549980LXL04_010804JCVI_TKOH_0014798.099.772 / 99.944Complex
TkA03G550000LXL04_010816JCVI_TKOH_0014777.3100.0 / 82.727Complex
TkA03G550020LXL04_010818JCVI_TKOH_0014770.3100.0 / 100.0Review
TkA03G550010LXL04_010816JCVI_TKOH_00147100.0100.0 / 13.896Review
TkA03G550030LXL04_010817JCVI_TKOH_0014799.5100.0 / 100.0Strict
TkA03G550060LXL04_010820JCVI_TKOH_0014795.4100.0 / 96.905Strict
TkA03G550780LXL04_010823JCVI_TKOH_00147100.0100.0 / 100.0Review
TkA03G550800LXL04_010824JCVI_TKOH_0014794.3100.0 / 56.989Complex
TkA03G550820LXL04_010825JCVI_TKOH_0014799.1100.0 / 99.844Strict
TkA03G550830LXL04_010826JCVI_TKOH_0014792.388.971 / 100.0Probable
TkA03G550840LXL04_010827JCVI_TKOH_0014791.7100.0 / 64.174Review
TkA03G550860LXL04_010828JCVI_TKOH_0014799.171.069 / 100.0Probable
TkA03G550980LXL04_010833JCVI_TKOH_0014796.8100.0 / 100.0Strict
TkA03G551260LXL04_010836JCVI_TKOH_0014766.289.759 / 98.894Review
TkA03G551340LXL04_010837JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G551480LXL04_010840JCVI_TKOH_0014799.886.248 / 91.841Strict
TkA03G551510LXL04_010842JCVI_TKOH_0014799.6100.0 / 100.0Complex
TkA03G551530LXL04_010843JCVI_TKOH_0014799.0100.0 / 100.0Complex
TkA03G551540LXL04_010844JCVI_TKOH_0014798.5100.0 / 100.0Complex
TkA03G551550LXL04_010845JCVI_TKOH_0014795.0100.0 / 97.838Complex
TkA03G551560LXL04_010846JCVI_TKOH_0014796.5100.0 / 100.0Review
TkA03G551610LXL04_010847JCVI_TKOH_0014798.593.333 / 100.0Strict
TkA03G551630LXL04_010848JCVI_TKOH_0014797.495.628 / 94.583Strict
TkA03G552170LXL04_010849JCVI_TKOH_0014798.4100.0 / 100.0Strict
TkA03G552230LXL04_010854JCVI_TKOH_0014787.0100.0 / 100.0Review
TkA03G552240LXL04_010867JCVI_TKOH_00147100.0100.0 / 17.735Review
TkA03G552600LXL04_010870JCVI_TKOH_0014780.396.026 / 84.444Complex
TkA03G552700LXL04_010870JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G553150LXL04_010875JCVI_TKOH_0014799.0100.0 / 100.0Strict
TkA03G553200LXL04_010876JCVI_TKOH_00147100.096.117 / 19.527Review
TkA03G553270LXL04_010885JCVI_TKOH_0014788.1100.0 / 100.0Complex
TkA03G554050LXL04_010885JCVI_TKOH_0014769.093.293 / 68.056Complex
TkA03G554290LXL04_010885JCVI_TKOH_0014792.8100.0 / 100.0Complex
TkA03G554300LXL04_010886JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G554480LXL04_010889JCVI_TKOH_0014799.3100.0 / 100.0Strict
TkA03G554570LXL04_010891JCVI_TKOH_0014798.956.522 / 18.958Complex
TkA03G554580LXL04_010892JCVI_TKOH_0014790.696.524 / 84.577Complex
TkA03G554670LXL04_010894JCVI_TKOH_00147100.085.366 / 99.291Complex
TkA03G554680LXL04_010892JCVI_TKOH_0014777.196.319 / 52.073Complex
TkA03G554720LXL04_010895JCVI_TKOH_00147100.083.456 / 100.0Review
TkA03G554760LXL04_010897JCVI_TKOH_0014798.374.214 / 67.429Review
TkA03G554770LXL04_010898JCVI_TKOH_00147100.0100.0 / 58.434Review
TkA03G554950LXL04_010905JCVI_TKOH_00147100.0100.0 / 68.502Review
TkA03G555010LXL04_010907JCVI_TKOH_0014797.997.241 / 61.039Complex
TkA03G555020LXL04_010908JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G555060LXL04_010909JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G555070LXL04_010910JCVI_TKOH_00147100.0100.0 / 100.0Review
TkA03G555090LXL04_010911JCVI_TKOH_0014799.5100.0 / 90.138Strict
TkA03G555210LXL04_010914JCVI_TKOH_00147100.0100.0 / 100.0Complex
TkA03G555280LXL04_010915JCVI_TKOH_0014789.697.059 / 93.939Review
TkA03G555290LXL04_010916JCVI_TKOH_0014799.3100.0 / 100.0Strict
TkA03G555300LXL04_010917JCVI_TKOH_0014797.1100.0 / 100.0Review
TkA03G555340LXL04_010920JCVI_TKOH_0014798.594.366 / 16.708Review
TkA03G555360LXL04_010920JCVI_TKOH_0014799.6100.0 / 33.292Review
TkA03G555630LXL04_010922JCVI_TKOH_00147100.0100.0 / 100.0Review
TkA03G555680LXL04_010923JCVI_TKOH_0014797.665.6 / 100.0Review
TkA03G555750LXL04_010925JCVI_TKOH_00147100.0100.0 / 100.0Review
TkA03G555770LXL04_010927JCVI_TKOH_0014798.999.275 / 96.113Strict
TkA03G555780LXL04_010928JCVI_TKOH_0014798.7100.0 / 88.377Strict
TkA03G555810LXL04_010929JCVI_TKOH_0014799.3100.0 / 100.0Complex
TkA03G555820LXL04_010930JCVI_TKOH_0014792.2100.0 / 100.0Complex
TkA03G555860LXL04_010931JCVI_TKOH_0014794.6100.0 / 100.0Complex
TkA03G555890LXL04_010932JCVI_TKOH_00147100.0100.0 / 100.0Review
TkA03G556390LXL04_010928JCVI_TKOH_0014799.195.265 / 35.812Review
TkA03G556420LXL04_010929JCVI_TKOH_0014799.997.714 / 98.486Complex
TkA03G556430LXL04_010930JCVI_TKOH_0014795.1100.0 / 100.0Complex
TkA03G556460LXL04_010931JCVI_TKOH_00147100.0100.0 / 100.0Review
TkA03G556720LXL04_010933JCVI_TKOH_0014799.7100.0 / 100.0Strict
TkA03G556730LXL04_010934JCVI_TKOH_00147100.0100.0 / 76.546Probable
TkA03G556780LXL04_010935JCVI_TKOH_00147100.097.329 / 97.619Strict
TkA03G556790LXL04_010936JCVI_TKOH_0014799.2100.0 / 94.964Strict
TkA03G556820LXL04_010937JCVI_TKOH_0014799.4100.0 / 91.803Complex
TkA03G556990LXL04_010939JCVI_TKOH_0014799.7100.0 / 100.0Strict
TkA03G557100LXL04_010941JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G557130LXL04_010915JCVI_TKOH_0014787.796.212 / 90.572Complex
TkA03G557140LXL04_010943JCVI_TKOH_0014781.8100.0 / 96.567Review
TkA03G557200LXL04_010945JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G557210LXL04_010946JCVI_TKOH_0014797.7100.0 / 100.0Review
TkA03G557370LXL04_010946JCVI_TKOH_0014775.990.98 / 69.811Complex
TkA03G557380LXL04_010947JCVI_TKOH_0014799.8100.0 / 100.0Strict
TkA03G557390LXL04_010948JCVI_TKOH_0014799.4100.0 / 93.22Strict
TkA03G558080LXL04_010952JCVI_TKOH_0014767.061.628 / 10.835Complex
TkA03G558090LXL04_010954JCVI_TKOH_00147100.0100.0 / 20.674Review
TkA03G558220LXL04_010955JCVI_TKOH_0014794.085.632 / 35.142Complex
TkA03G558250LXL04_010956JCVI_TKOH_0014789.3100.0 / 100.0Review
TkA03G558490LXL04_010957JCVI_TKOH_00147100.0100.0 / 98.737Strict
TkA03G558640LXL04_010972JCVI_TKOH_0014799.7100.0 / 100.0Strict
TkA03G558650LXL04_010973JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G558680LXL04_010974JCVI_TKOH_00147100.0100.0 / 100.0Strict
TkA03G558690LXL04_010975JCVI_TKOH_0014799.6100.0 / 100.0Strict
TkA03G559190LXL04_010977JCVI_TKOH_0014769.288.421 / 14.552Complex
TkA03G559400LXL04_010977JCVI_TKOH_0014798.393.939 / 70.22Probable
TkA03G559410LXL04_010977JCVI_TKOH_0014793.496.456 / 30.372Complex
TkA03G559480LXL04_010978JCVI_TKOH_00147100.0100.0 / 48.852Review
TkA03G559560LXL04_010980JCVI_TKOH_0014799.497.568 / 90.025Strict
TkA03G559620LXL04_010982JCVI_TKOH_0014794.363.063 / 31.532Review
TkA03G559650LXL04_010984JCVI_TKOH_0014797.9100.0 / 100.0Review