Gene Card
Gene overview
cDNA / CDS / Protein Sequences
846 bp · TkA07G043650|TK1151|cDNA
ATGACGAAGGAGCTCAAAGGCGAAGGAGGTGACCCAGAAAACTCTGTCAGTCATCATCAAGAACCAGAACACCCCATTTTTGAAAGAAACACGAAAGATGTATACCGGTGGAGCTCCAGGCATGGACCGAGAAAAATTCACGGTTTTGAGCACAACGCCATGGCAATGGAGAGGGATCTTGTCATGCGAAACATAAATGCTCCATATAAGATTTTTGGGATTGTCGGAGTCGCCGGAATCGGGAAAACCACTCTTTGTCA...
846 bp · TkA07G043650|TK1151|CDS
ATGACGAAGGAGCTCAAAGGCGAAGGAGGTGACCCAGAAAACTCTGTCAGTCATCATCAAGAACCAGAACACCCCATTTTTGAAAGAAACACGAAAGATGTATACCGGTGGAGCTCCAGGCATGGACCGAGAAAAATTCACGGTTTTGAGCACAACGCCATGGCAATGGAGAGGGATCTTGTCATGCGAAACATAAATGCTCCATATAAGATTTTTGGGATTGTCGGAGTCGCCGGAATCGGGAAAACCACTCTTTGTCA...
Protein
Download Protein FASTA281 aa · TkA07G043650|TK1151|PROTEIN
MTKELKGEGGDPENSVSHHQEPEHPIFERNTKDVYRWSSRHGPRKIHGFEHNAMAMERDLVMRNINAPYKIFGIVGVAGIGKTTLCQSIFSRKLVKEHFCPRIWVCLSKQPIDHDDYRKEIVIRILHRKDGDVHGLRKLILLLRLQLIGKKYLIVLDDAWNDDEFFLKLTRSEQPNMKWGEELSYGLPKGCGGAIISTSRSDSLLKRMFGKDVDLLYLKRHTKEMIHEIFRDTCDGIPLAAKLLGKIAREELPLKHKPPS...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA07G043650 |
|---|---|
| TK1151 ID | TkA07G043650 |
| OH-1004 ID | LXL04_027264 |
| Relationship / confidence | Rbh Below Probable Coverage Or Synteny Threshold / Review |
| Protein identity (%) | 88.400 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 75.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA07G043650 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr07:11585505-11586461 (+) | |||||||||
| Description | Similar to At4g19060: Probable disease resistance protein At4g19060 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006952 defense response Biological Process GO:0042742 defense response to bacterium Biological Process GO:0050776 regulation of immune response Biological Process GO:0050829 defense response to Gram-negative bacterium Biological Process GO:0051607 defense response to virus Biological Process GO:0098542 defense response to other organism Biological Process GO:0005634 nucleus Cellular Component GO:0005886 plasma membrane Cellular Component GO:0005524 ATP binding Molecular Function GO:0043531 ADP binding Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT3G50950 ath:AT4G19060 ath:AT5G45440 ath:AT5G45490 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00931NB-ARC69-165 aaPF13173AAA_1470-100 aaPF00005ABC_tran70-91 aaPF13401AAA_2274-160 aaPF13191AAA_1674-112 aaPF05729NACHT74-92 aaPF00735Septin74-98 aaPF20720nSTAND374-96 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA07G043650 | PF00931 | NB-ARC | 69 | 165 | 3.5e-16 | 60.0 |
| TkA07G043650 | PF13173 | AAA_14 | 70 | 100 | 0.026 | 15.2 |
| TkA07G043650 | PF00005 | ABC_tran | 70 | 91 | 0.1 | 13.9 |
| TkA07G043650 | PF13401 | AAA_22 | 74 | 160 | 0.0028 | 18.7 |
| TkA07G043650 | PF13191 | AAA_16 | 74 | 112 | 0.021 | 16.1 |
| TkA07G043650 | PF05729 | NACHT | 74 | 92 | 0.029 | 14.9 |
| TkA07G043650 | PF00735 | Septin | 74 | 98 | 0.089 | 12.8 |
| TkA07G043650 | PF20720 | nSTAND3 | 74 | 96 | 0.34 | 11.3 |
| TkA07G043650 | PF03029 | ATP_bind_1 | 74 | 90 | 0.38 | 11.2 |
| TkA07G043650 | PF00005 | ABC_tran | 138 | 159 | 0.1 | 13.9 |
| TkA07G043650 | PF00735 | Septin | 213 | 232 | 0.089 | 12.8 |
| TkA07G043650 | PF13191 | AAA_16 | 235 | 250 | 0.021 | 16.1 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.