Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1465 bp · TkA04G328970|TK1151|cDNA
CTAACCCCCACCAGGCCACCAGTATAAAGAGAGAGGAACAGCATTAGCCCACTCCTTATCGATTTAAACCACCACAACCACCACCGCAACCACCACCACCCTCCGTCGACATTCAATCACTCTCTTCCTTTTTCTTCCCCTCACTCCGCTTTCTAAAGGCTGTCCCCGATTCTAAGAACAGAAAGGACGAAAACTAAAGCGAAATCCACCGCCGTTGGTTCCAGATCTGCATCACCGGTGTCCATGACTGCTAATTTGGA...
888 bp · TkA04G328970|TK1151|CDS
ATGGGGAAAGCAGGAAGAGATTGGACACAGATCTATGCAATATACGGCATGGACGATTGGCACACACCGATTTTTCTCCTGATCCACGCAATCGTCTTCTCGGCTTCATCACTCGTATTCCTTCTATACTTCAACTGGATTTGCTACTCTTTCGAATCAATCTTCCCGTCAGTATTTTCCGGCAGTTTCGCCAGATTTGCCGCAGGATTCACCGGCTCCGTTACCGCTCTCTCCGCCGTCTGCCTCTTCTACGCCGCCGG...
Protein
Download Protein FASTA295 aa · TkA04G328970|TK1151|PROTEIN
MGKAGRDWTQIYAIYGMDDWHTPIFLLIHAIVFSASSLVFLLYFNWICYSFESIFPSVFSGSFARFAAGFTGSVTALSAVCLFYAAGNMFYSSIALRWDMAQRMVNAVHDWSTVKTVLDVGCGRGILLNAVAMQLKKEGSSGRVVGLDRKNTTLSTLRTAGMEGVEEYVTCREGDARRLPFPENYFDVVVSAGFVHKVGKEFGPKTAAASAERMRVVGEVVRVLKEGGVGVVWDLVHVPEYVLRLQELKMEEIRVSERVT...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA04G328970 |
|---|---|
| TK1151 ID | TkA04G328970 |
| OH-1004 ID | LXL04_037609 |
| Relationship / confidence | Sequence Supported Annotation Or Model Conflict / Review |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA04G328970 |
|---|---|
| Location | Chr04:83077698-83079561 (+) |
| Description | Protein of unknown function |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006400 tRNA modification Biological Process GO:0009234 menaquinone biosynthetic process Biological Process GO:0032259 methylation Biological Process GO:0046685 response to arsenic-containing substance Biological Process GO:0008175 tRNA methyltransferase activity Molecular Function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity Molecular Function GO:0030791 arsenite methyltransferase activity Molecular Function GO:0043770 demethylmenaquinone methyltransferase activity Molecular Function |
| KEGG gene cross-reference | ecu:ECU09_1500 ljo:LJ_0053 sth:STH2515 tth:TT_C1503 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF03141Methyltransf_2982-189 aaPF01135PCMT101-177 aaPF13679Methyltransf_32102-156 aaPF12847Methyltransf_18103-194 aaPF01209Ubie_methyltran104-238 aaPF05185PRMT5112-191 aaPF01728FtsJ112-194 aaPF13489Methyltransf_23113-194 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA04G328970 | PF03141 | Methyltransf_29 | 82 | 189 | 0.016 | 14.6 |
| TkA04G328970 | PF01135 | PCMT | 101 | 177 | 0.0045 | 17.5 |
| TkA04G328970 | PF13679 | Methyltransf_32 | 102 | 156 | 0.00025 | 21.8 |
| TkA04G328970 | PF12847 | Methyltransf_18 | 103 | 194 | 0.31 | 11.8 |
| TkA04G328970 | PF01209 | Ubie_methyltran | 104 | 238 | 3.4e-06 | 27.3 |
| TkA04G328970 | PF05185 | PRMT5 | 112 | 191 | 0.0013 | 19.3 |
| TkA04G328970 | PF01728 | FtsJ | 112 | 194 | 0.0067 | 17.1 |
| TkA04G328970 | PF13489 | Methyltransf_23 | 113 | 194 | 0.0021 | 18.5 |
| TkA04G328970 | PF05175 | MTS | 113 | 199 | 0.0026 | 18.0 |
| TkA04G328970 | PF06325 | PrmA | 114 | 167 | 0.13 | 12.5 |
| TkA04G328970 | PF13847 | Methyltransf_31 | 115 | 248 | 9.8e-13 | 48.8 |
| TkA04G328970 | PF02353 | CMAS | 115 | 215 | 0.062 | 13.3 |
| TkA04G328970 | PF07021 | MetW | 116 | 191 | 0.026 | 14.9 |
| TkA04G328970 | PF13649 | Methyltransf_25 | 117 | 228 | 3.8e-14 | 53.9 |
| TkA04G328970 | PF08241 | Methyltransf_11 | 118 | 230 | 9.6e-16 | 58.9 |
| TkA04G328970 | PF08242 | Methyltransf_12 | 118 | 229 | 1.9e-06 | 29.2 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.