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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA01G365090
Reference: TK1151 Chr: Chr01 Coordinates: 90977521-90988054 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2389 bp · TkA01G365090|TK1151|cDNA

AAAGCATCCATTTTTCTCACAAAAAGATTGCTTTTGTTTTCATGATGAGTGGATTCTCACTCTCACACACATTCTTCGACATTCAACTTGCCTCATCAAATCATATTTCAGAACGAATTAGAATTAGAATTGGAATTTCTTCCCTAATTTAAGTTCCTATTCCATTCCAATTCCAATTATATGCCCTAATGCTTTGTGGGTCCTCAACACTTACACAAACATCATCAATCACAAACATCAATAAACCTTCAAATCATGAT...

CDS

Download CDS FASTA

1902 bp · TkA01G365090|TK1151|CDS

ATGTTTCTTGTTTCATCCTCTTCTCCACCATCCATGGCTACACCAGACTCATCCAGGAAATGCAAAGGCAGATCCGGAGACCATCAGTTGGACACTAAATTGACTCATTTATATGGACTCATTCACTATTCGCATCTCCATACGAAGTTATTGGTTCAATGCATCATCCTGCTTTTGCTTTTGAGTCATAGTTATTCAGACAATAAGCCTGACATCGAAGGAGAAGTTTTGATCGAGCTTCTAAAGGATCTAAATGACAC...

Protein

Download Protein FASTA

633 aa · TkA01G365090|TK1151|PROTEIN

MFLVSSSSPPSMATPDSSRKCKGRSGDHQLDTKLTHLYGLIHYSHLHTKLLVQCIILLLLLSHSYSDNKPDIEGEVLIELLKDLNDTNGNIQDWNYFFVSPCYSWSHVICDHREGNVISLSLGSIGFSGTLSSSITKLKFLTKLDLHDNNLSGELPDLSSLVNLQILNLTQNKFSGSIPVSWGQLSNLKYLDLSSNNLSGKIPEKLFSTRVFNFTGTHLECGTSVPQPCISGSSVSGSTKNSKMKFVTFGVGCAALVLLL...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA01G365090
TK1151 IDTkA01G365090
OH-1004 IDLXL04_003390
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)99.800
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA01G365090
LocationChr01:90977521-90988054 (-)
DescriptionSimilar to At5g63710: Probable LRR receptor-like serine/threonine-protein kinase At5g63710
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g63710 Probable LRR receptor-like serine/threonine-protein kinase At5g63710. No verified direct reference in this release
At5g65240 Probable LRR receptor-like serine/threonine-protein kinase At5g65240. No verified direct reference in this release
At5g10290 Probable LRR receptor-like serine/threonine-protein kinase At5g10290. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os02g0283800 May be involved in the regulation of plant growth through the brassinosteroid (BR) signaling pathway. No verified direct reference in this release
UniProt: B8BB68 LRR receptor kinase involved in defense response. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_003390 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0002213 defense response to insect Biological Process
GO:0007165 signal transduction Biological Process
GO:0009742 brassinosteroid mediated signaling pathway Biological Process
GO:0005886 plasma membrane Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0009536 plastid Cellular Component
GO:0004674 protein serine/threonine kinase activity Molecular Function
GO:0004675 transmembrane receptor protein serine/threonine kinase activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0042802 identical protein binding Molecular Function
GO:0042803 protein homodimerization activity Molecular Function
GO:0106310 protein serine kinase activity Molecular Function
KEGG gene cross-reference
ath:AT5G10290
ath:AT5G63710
ath:AT5G65240
dosa:Os02g0283800
osa:4329032
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.851
Rank 1 · TkA01G365090 · TK1151
Endoplasmic reticulum0.093
Rank 2 · TkA01G365090 · TK1151
Cytoplasm0.078
Rank 3 · TkA01G365090 · TK1151
Nucleus0.055
Rank 4 · TkA01G365090 · TK1151
Lysosome / Vacuole0.028
Rank 5 · TkA01G365090 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF30276Arminin56-94 aa
PF08263LRRNT_273-111 aa
PF23211LRR_LRWD1115-196 aa
PF00560LRR_1117-138 aa
PF12799LRR_4117-159 aa
PF23598LRR_14130-196 aa
PF24141LRR_ComC135-183 aa
PF25013LRR_Zer-1136-199 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA01G365090PF30276Arminin56940.1313.0
TkA01G365090PF08263LRRNT_2731116.5e-0627.0
TkA01G365090PF23211LRR_LRWD11151960.05713.8
TkA01G365090PF00560LRR_11171383.5e-0935.7
TkA01G365090PF12799LRR_41171595e-0833.6
TkA01G365090PF23598LRR_141301960.0004719.7
TkA01G365090PF24141LRR_ComC1351830.05413.9
TkA01G365090PF25013LRR_Zer-11361990.3111.9
TkA01G365090PF13516LRR_61391540.0009719.7
TkA01G365090PF00560LRR_11411573.5e-0935.7
TkA01G365090PF12799LRR_41411755e-0833.6
TkA01G365090PF13855LRR_81411983.7e-0730.5
TkA01G365090PF00560LRR_11631853.5e-0935.7
TkA01G365090PF12799LRR_41632035e-0833.6
TkA01G365090PF13516LRR_61631760.0009719.7
TkA01G365090PF23211LRR_LRWD11822060.05713.8

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q8W4S5Arabidopsis thalianasp|Q8W4S5|Y5371_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g6371061.800%Swiss-ProtHigh
C0LGX1Arabidopsis thalianasp|C0LGX1|Y5524_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g6524055.500%Swiss-ProtHigh
C0LGT1Arabidopsis thalianasp|C0LGT1|Y5129_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g1029055.600%Swiss-ProtHigh
Q6K4T4Oryza sativa subsp. japonicasp|Q6K4T4|SERK4_ORYSJ LRR receptor kinase SERK257.700%Swiss-ProtHigh
B8BB68Oryza sativa subsp. indicasp|B8BB68|BAK1_ORYSI LRR receptor kinase BAK149.500%Swiss-ProtMedium

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