同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00312
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 40
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00312

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00312 Chr07 95438577-97247323 Chr06 108842459-110980414 mixed High 40 anchors
Chr07 95438577-97247323 Chr06 108842459-110980414 JCVI_TKOH_00312 · 40 gene pairs TkA07G380780 | LXL04_030134 | 98.7% | multi_source_to_OH1004 | Complex TkA07G380800 | LXL04_030135 | 85.1% | non_reciprocal_best_hit | Complex TkA07G380810 | LXL04_030135 | 76.1% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA07G380820 | LXL04_030136 | 95.4% | RBH_high_identity_coverage_synteny | Strict TkA07G381060 | LXL04_030140 | 95.4% | RBH_high_identity_coverage_synteny | Strict TkA07G381440 | LXL04_030141 | 100.0% | non_reciprocal_best_hit | Complex TkA07G381490 | LXL04_030142 | 93.9% | RBH_sequence_supported | Probable TkA07G381550 | LXL04_030143 | 67.7% | non_reciprocal_best_hit | Complex TkA07G381560 | LXL04_030143 | 99.0% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA07G381680 | LXL04_030144 | 89.1% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA07G381720 | LXL04_030146 | 99.1% | RBH_high_identity_coverage_synteny | Strict TkA07G382660 | LXL04_030152 | 94.3% | RBH_sequence_supported | Probable
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00312 Chr07:95438577-97247323 Chr06:108842459-110980414 mixed 40 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 40 · 当前范围 1–40 · 页码 1/1

TkA07G380780 → LXL04_030134
98.7%
TkA07G380800 → LXL04_030135
85.1%
TkA07G380810 → LXL04_030135
76.1%
TkA07G380820 → LXL04_030136
95.4%
TkA07G381060 → LXL04_030140
95.4%
TkA07G381440 → LXL04_030141
100.0%
TkA07G381490 → LXL04_030142
93.9%
TkA07G381550 → LXL04_030143
67.7%
TkA07G381560 → LXL04_030143
99.0%
TkA07G381680 → LXL04_030144
89.1%
TkA07G381720 → LXL04_030146
99.1%
TkA07G382660 → LXL04_030152
94.3%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA07G380780LXL04_030134JCVI_TKOH_0031298.7100.0 / 98.551Complex
TkA07G380800LXL04_030135JCVI_TKOH_0031285.198.723 / 29.668Complex
TkA07G380810LXL04_030135JCVI_TKOH_0031276.199.604 / 42.008待复核
TkA07G380820LXL04_030136JCVI_TKOH_0031295.4100.0 / 100.0Strict
TkA07G381060LXL04_030140JCVI_TKOH_0031295.4100.0 / 100.0Strict
TkA07G381440LXL04_030141JCVI_TKOH_00312100.0100.0 / 100.0Complex
TkA07G381490LXL04_030142JCVI_TKOH_0031293.9100.0 / 100.0Probable
TkA07G381550LXL04_030143JCVI_TKOH_0031267.796.124 / 45.091Complex
TkA07G381560LXL04_030143JCVI_TKOH_0031299.0100.0 / 69.818待复核
TkA07G381680LXL04_030144JCVI_TKOH_0031289.1100.0 / 100.0待复核
TkA07G381720LXL04_030146JCVI_TKOH_0031299.1100.0 / 100.0Strict
TkA07G382660LXL04_030152JCVI_TKOH_0031294.3100.0 / 100.0Probable
TkA07G382670LXL04_030153JCVI_TKOH_00312100.096.0 / 53.659待复核
TkA07G383050LXL04_030161JCVI_TKOH_00312100.037.786 / 28.696待复核
TkA07G383060LXL04_030162JCVI_TKOH_0031296.998.246 / 96.79Complex
TkA07G383340LXL04_030167JCVI_TKOH_0031299.2100.0 / 100.0Complex
TkA07G383410LXL04_030169JCVI_TKOH_00312100.0100.0 / 98.586Strict
TkA07G383750LXL04_030170JCVI_TKOH_00312100.0100.0 / 100.0Strict
TkA07G383880LXL04_030172JCVI_TKOH_00312100.0100.0 / 100.0Strict
TkA07G384220LXL04_030173JCVI_TKOH_00312100.0100.0 / 72.159Complex
TkA07G384310LXL04_030176JCVI_TKOH_00312100.093.312 / 46.434待复核
TkA07G384320LXL04_030177JCVI_TKOH_0031299.3100.0 / 100.0Strict
TkA07G384330LXL04_030178JCVI_TKOH_0031299.3100.0 / 100.0Strict
TkA07G384340LXL04_030179JCVI_TKOH_0031299.8100.0 / 100.0Strict
TkA07G384350LXL04_030180JCVI_TKOH_0031299.1100.0 / 100.0Strict
TkA07G384360LXL04_030183JCVI_TKOH_0031298.698.884 / 90.353Strict
TkA07G384400LXL04_030184JCVI_TKOH_0031290.894.631 / 22.329Complex
TkA07G384440LXL04_030185JCVI_TKOH_0031298.299.743 / 44.495待复核
TkA07G385710LXL04_030188JCVI_TKOH_0031289.9100.0 / 74.194待复核
TkA07G385890LXL04_030191JCVI_TKOH_0031296.9100.0 / 69.492待复核
TkA07G385940LXL04_030192JCVI_TKOH_0031297.0100.0 / 84.08Strict
TkA07G386130LXL04_030196JCVI_TKOH_0031296.5100.0 / 100.0Strict
TkA07G386140LXL04_030197JCVI_TKOH_0031294.0100.0 / 100.0Probable
TkA07G386620LXL04_030200JCVI_TKOH_0031298.6100.0 / 80.077Strict
TkA07G386750LXL04_030202JCVI_TKOH_0031292.6100.0 / 100.0Probable
TkA07G386760LXL04_030203JCVI_TKOH_0031299.4100.0 / 88.481Strict
TkA07G387440LXL04_030209JCVI_TKOH_0031299.6100.0 / 100.0Strict
TkA07G387480LXL04_030210JCVI_TKOH_0031299.9100.0 / 100.0待复核
TkA07G387500LXL04_030211JCVI_TKOH_0031296.761.0 / 31.282Complex
TkA07G387750LXL04_030213JCVI_TKOH_0031290.670.833 / 57.432Complex