Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00245
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 24
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00245The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00245 |
Chr05:107084984-107794334 | Chr04:138669809-139124490 | mixed | 24 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 24 · Showing 1–24 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA05G429350 | LXL04_021885 | JCVI_TKOH_00245 | 99.3 | 100.0 / 60.835 | Review |
TkA05G429360 | LXL04_021884 | JCVI_TKOH_00245 | 96.9 | 100.0 / 100.0 | Strict |
TkA05G429410 | LXL04_021874 | JCVI_TKOH_00245 | 100.0 | 100.0 / 82.812 | Review |
TkA05G429460 | LXL04_021878 | JCVI_TKOH_00245 | 97.9 | 94.236 / 93.3 | Complex |
TkA05G429530 | LXL04_021874 | JCVI_TKOH_00245 | 100.0 | 100.0 / 82.812 | Complex |
TkA05G429540 | LXL04_021873 | JCVI_TKOH_00245 | 95.6 | 100.0 / 100.0 | Strict |
TkA05G429570 | LXL04_021872 | JCVI_TKOH_00245 | 89.1 | 100.0 / 100.0 | Review |
TkA05G429630 | LXL04_021870 | JCVI_TKOH_00245 | 98.0 | 100.0 / 100.0 | Strict |
TkA05G429720 | LXL04_021868 | JCVI_TKOH_00245 | 99.2 | 100.0 / 100.0 | Complex |
TkA05G429740 | LXL04_021867 | JCVI_TKOH_00245 | 100.0 | 100.0 / 71.849 | Probable |
TkA05G430000 | LXL04_021865 | JCVI_TKOH_00245 | 100.0 | 100.0 / 100.0 | Strict |
TkA05G430030 | LXL04_021864 | JCVI_TKOH_00245 | 100.0 | 100.0 / 100.0 | Complex |
TkA05G430400 | LXL04_021862 | JCVI_TKOH_00245 | 100.0 | 100.0 / 93.368 | Strict |
TkA05G430420 | LXL04_021861 | JCVI_TKOH_00245 | 100.0 | 100.0 / 100.0 | Strict |
TkA05G430430 | LXL04_021860 | JCVI_TKOH_00245 | 99.0 | 98.113 / 22.366 | Review |
TkA05G430450 | LXL04_021860 | JCVI_TKOH_00245 | 97.0 | 97.115 / 21.72 | Review |
TkA05G430470 | LXL04_021859 | JCVI_TKOH_00245 | 100.0 | 100.0 / 100.0 | Complex |
TkA05G430500 | LXL04_021858 | JCVI_TKOH_00245 | 98.1 | 98.165 / 92.609 | Complex |
TkA05G430590 | LXL04_021857 | JCVI_TKOH_00245 | 97.3 | 99.678 / 49.411 | Review |
TkA05G430600 | LXL04_021857 | JCVI_TKOH_00245 | 100.0 | 99.482 / 45.247 | Review |
TkA05G430620 | LXL04_021856 | JCVI_TKOH_00245 | 99.2 | 100.0 / 100.0 | Strict |
TkA05G430760 | LXL04_021854 | JCVI_TKOH_00245 | 100.0 | 100.0 / 100.0 | Strict |
TkA05G430770 | LXL04_021853 | JCVI_TKOH_00245 | 99.1 | 93.603 / 50.751 | Review |
TkA05G431300 | LXL04_021852 | JCVI_TKOH_00245 | 98.5 | 94.138 / 76.111 | Complex |