Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00226
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 11
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00226The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00226 |
Chr05:97087702-97470550 | Chr02:22326373-22669612 | - | 11 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 11 · Showing 1–11 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA05G390860 | LXL04_006709 | JCVI_TKOH_00226 | 98.3 | 100.0 / 100.0 | Review |
TkA05G390870 | LXL04_006708 | JCVI_TKOH_00226 | 97.7 | 100.0 / 100.0 | Complex |
TkA05G391040 | LXL04_006703 | JCVI_TKOH_00226 | 99.6 | 100.0 / 100.0 | Complex |
TkA05G391450 | LXL04_006700 | JCVI_TKOH_00226 | 99.8 | 100.0 / 100.0 | Probable |
TkA05G391550 | LXL04_006699 | JCVI_TKOH_00226 | 76.2 | 89.516 / 97.926 | Complex |
TkA05G391710 | LXL04_006698 | JCVI_TKOH_00226 | 99.6 | 98.954 / 100.0 | Review |
TkA05G391730 | LXL04_006697 | JCVI_TKOH_00226 | 98.8 | 100.0 / 100.0 | Complex |
TkA05G391770 | LXL04_006696 | JCVI_TKOH_00226 | 100.0 | 100.0 / 79.798 | Complex |
TkA05G392060 | LXL04_006694 | JCVI_TKOH_00226 | 99.0 | 100.0 / 61.736 | Complex |
TkA05G392070 | LXL04_006695 | JCVI_TKOH_00226 | 98.9 | 92.079 / 100.0 | Probable |
TkA05G392160 | LXL04_006690 | JCVI_TKOH_00226 | 95.8 | 98.246 / 33.871 | Review |