同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00131
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 36
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00131

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00131 Chr03 35073187-38388365 Chr02 39345514-42058755 mixed High 36 anchors
Chr03 35073187-38388365 Chr02 39345514-42058755 JCVI_TKOH_00131 · 36 gene pairs TkA03G137290 | LXL04_007205 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA03G137480 | LXL04_007206 | 98.5% | RBH_high_identity_coverage_synteny | Strict TkA03G137600 | LXL04_007207 | 98.5% | multi_source_to_OH1004 | Complex TkA03G137870 | LXL04_007211 | 86.5% | multi_source_to_OH1004 | Complex TkA03G137900 | LXL04_007212 | 99.4% | multi_source_to_OH1004 | Complex TkA03G137910 | LXL04_007213 | 100.0% | multi_source_to_OH1004 | Complex TkA03G140920 | LXL04_007217 | 98.5% | multi_source_to_OH1004 | Complex TkA03G140940 | LXL04_007218 | 99.6% | RBH_high_identity_coverage_synteny | Strict TkA03G141100 | LXL04_007220 | 98.8% | multi_source_to_OH1004 | Complex TkA03G141130 | LXL04_007221 | 98.8% | multi_source_to_OH1004 | Complex TkA03G141680 | LXL04_007222 | 89.2% | non_reciprocal_best_hit | Complex TkA03G141690 | LXL04_007222 | 92.8% | RBH_below_probable_coverage_or_synteny_threshold | Review
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00131 Chr03:35073187-38388365 Chr02:39345514-42058755 mixed 36 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 36 · 当前范围 1–36 · 页码 1/1

TkA03G137290 → LXL04_007205
100.0%
TkA03G137480 → LXL04_007206
98.5%
TkA03G137600 → LXL04_007207
98.5%
TkA03G137870 → LXL04_007211
86.5%
TkA03G137900 → LXL04_007212
99.4%
TkA03G137910 → LXL04_007213
100.0%
TkA03G140920 → LXL04_007217
98.5%
TkA03G140940 → LXL04_007218
99.6%
TkA03G141100 → LXL04_007220
98.8%
TkA03G141130 → LXL04_007221
98.8%
TkA03G141680 → LXL04_007222
89.2%
TkA03G141690 → LXL04_007222
92.8%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA03G137290LXL04_007205JCVI_TKOH_00131100.093.789 / 93.789Strict
TkA03G137480LXL04_007206JCVI_TKOH_0013198.5100.0 / 100.0Strict
TkA03G137600LXL04_007207JCVI_TKOH_0013198.5100.0 / 82.09Complex
TkA03G137870LXL04_007211JCVI_TKOH_0013186.558.796 / 97.872Complex
TkA03G137900LXL04_007212JCVI_TKOH_0013199.4100.0 / 100.0Complex
TkA03G137910LXL04_007213JCVI_TKOH_00131100.087.978 / 100.0Complex
TkA03G140920LXL04_007217JCVI_TKOH_0013198.5100.0 / 100.0Complex
TkA03G140940LXL04_007218JCVI_TKOH_0013199.6100.0 / 87.218Strict
TkA03G141100LXL04_007220JCVI_TKOH_0013198.8100.0 / 100.0Complex
TkA03G141130LXL04_007221JCVI_TKOH_0013198.8100.0 / 91.707Complex
TkA03G141680LXL04_007222JCVI_TKOH_0013189.266.935 / 24.058Complex
TkA03G141690LXL04_007222JCVI_TKOH_0013192.887.113 / 52.174待复核
TkA03G142280LXL04_007223JCVI_TKOH_0013198.8100.0 / 100.0Strict
TkA03G142430LXL04_007225JCVI_TKOH_0013180.696.677 / 59.568待复核
TkA03G142550LXL04_007226JCVI_TKOH_00131100.0100.0 / 55.944待复核
TkA03G142570LXL04_007227JCVI_TKOH_00131100.0100.0 / 100.0Complex
TkA03G142580LXL04_007228JCVI_TKOH_0013198.3100.0 / 100.0Strict
TkA03G143900LXL04_007231JCVI_TKOH_00131100.090.515 / 98.817Strict
TkA03G144280LXL04_007232JCVI_TKOH_0013199.898.165 / 100.0待复核
TkA03G144680LXL04_007232JCVI_TKOH_0013199.498.165 / 100.0Complex
TkA03G145280LXL04_007239JCVI_TKOH_0013155.1100.0 / 64.484Complex
TkA03G145430LXL04_007240JCVI_TKOH_0013177.6100.0 / 94.855待复核
TkA03G145460LXL04_007241JCVI_TKOH_0013195.4100.0 / 31.665待复核
TkA03G145470LXL04_007241JCVI_TKOH_0013184.286.0 / 9.19Complex
TkA03G146310LXL04_007247JCVI_TKOH_0013196.172.028 / 9.131Complex
TkA03G146320LXL04_007248JCVI_TKOH_0013198.178.195 / 63.03Complex
TkA03G146330LXL04_007249JCVI_TKOH_0013177.6100.0 / 47.574Complex
TkA03G146570LXL04_007247JCVI_TKOH_0013196.298.996 / 98.316Strict
TkA03G146580LXL04_007248JCVI_TKOH_00131100.0100.0 / 100.0待复核
TkA03G146590LXL04_007249JCVI_TKOH_0013177.4100.0 / 100.0待复核
TkA03G147940LXL04_007251JCVI_TKOH_0013198.378.829 / 100.0Probable
TkA03G148980LXL04_007254JCVI_TKOH_0013199.6100.0 / 100.0待复核
TkA03G149650LXL04_007255JCVI_TKOH_0013194.2100.0 / 100.0Complex
TkA03G149730LXL04_007255JCVI_TKOH_0013194.2100.0 / 100.0Complex
TkA03G149920LXL04_007256JCVI_TKOH_0013199.3100.0 / 100.0待复核
TkA03G149930LXL04_007257JCVI_TKOH_0013186.496.296 / 54.128待复核