同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00361
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 19
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00361

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00361 Chr08 102095733-103851616 Chr07 102631159-105816343 mixed High 19 anchors
Chr08 102095733-103851616 Chr07 102631159-105816343 JCVI_TKOH_00361 · 19 gene pairs TkA08G400770 | LXL04_034551 | 90.8% | multi_source_to_OH1004 | Complex TkA08G402210 | LXL04_034540 | 99.3% | RBH_high_identity_coverage_synteny | Strict TkA08G402220 | LXL04_034539 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA08G403290 | LXL04_034537 | 98.6% | multi_source_to_OH1004 | Complex TkA08G404710 | LXL04_034530 | 96.0% | RBH_high_identity_coverage_synteny | Strict TkA08G405640 | LXL04_034527 | 94.5% | RBH_sequence_supported | Probable TkA08G405650 | LXL04_034526 | 98.8% | RBH_high_identity_coverage_synteny | Strict TkA08G405990 | LXL04_034519 | 98.3% | RBH_high_identity_coverage_synteny | Strict TkA08G406130 | LXL04_034516 | 99.1% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA08G406180 | LXL04_034514 | 90.1% | RBH_sequence_supported | Probable TkA08G406210 | LXL04_034512 | 93.9% | RBH_sequence_supported | Probable TkA08G406380 | LXL04_034511 | 92.5% | RBH_sequence_supported | Probable
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00361 Chr08:102095733-103851616 Chr07:102631159-105816343 mixed 19 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 19 · 当前范围 1–19 · 页码 1/1

TkA08G400770 → LXL04_034551
90.8%
TkA08G402210 → LXL04_034540
99.3%
TkA08G402220 → LXL04_034539
100.0%
TkA08G403290 → LXL04_034537
98.6%
TkA08G404710 → LXL04_034530
96.0%
TkA08G405640 → LXL04_034527
94.5%
TkA08G405650 → LXL04_034526
98.8%
TkA08G405990 → LXL04_034519
98.3%
TkA08G406130 → LXL04_034516
99.1%
TkA08G406180 → LXL04_034514
90.1%
TkA08G406210 → LXL04_034512
93.9%
TkA08G406380 → LXL04_034511
92.5%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA08G400770LXL04_034551JCVI_TKOH_0036190.8100.0 / 90.305Complex
TkA08G402210LXL04_034540JCVI_TKOH_0036199.3100.0 / 100.0Strict
TkA08G402220LXL04_034539JCVI_TKOH_00361100.081.592 / 100.0Strict
TkA08G403290LXL04_034537JCVI_TKOH_0036198.6100.0 / 100.0Complex
TkA08G404710LXL04_034530JCVI_TKOH_0036196.0100.0 / 97.674Strict
TkA08G405640LXL04_034527JCVI_TKOH_0036194.594.444 / 99.727Probable
TkA08G405650LXL04_034526JCVI_TKOH_0036198.8100.0 / 100.0Strict
TkA08G405990LXL04_034519JCVI_TKOH_0036198.399.34 / 88.791Strict
TkA08G406130LXL04_034516JCVI_TKOH_0036199.1100.0 / 100.0待复核
TkA08G406180LXL04_034514JCVI_TKOH_0036190.187.173 / 84.123Probable
TkA08G406210LXL04_034512JCVI_TKOH_0036193.980.782 / 87.544Probable
TkA08G406380LXL04_034511JCVI_TKOH_0036192.5100.0 / 100.0Probable
TkA08G406900LXL04_034492JCVI_TKOH_0036142.387.903 / 29.027Complex
TkA08G407240LXL04_034492JCVI_TKOH_0036172.4100.0 / 47.049Complex
TkA08G407490LXL04_034497JCVI_TKOH_0036187.383.721 / 67.094待复核
TkA08G407580LXL04_034492JCVI_TKOH_0036188.4100.0 / 97.608Complex
TkA08G407710LXL04_034490JCVI_TKOH_0036198.688.686 / 88.182Strict
TkA08G407880LXL04_034488JCVI_TKOH_00361100.098.305 / 85.294Strict
TkA08G407900LXL04_034485JCVI_TKOH_0036196.6100.0 / 64.353待复核