同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00141
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 69
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00141

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00141 Chr03 73471115-79846582 Chr02 109881891-115440657 mixed High 69 anchors
Chr03 73471115-79846582 Chr02 109881891-115440657 JCVI_TKOH_00141 · 69 gene pairs TkA03G298770 | LXL04_008989 | 99.3% | RBH_high_identity_coverage_synteny | Strict TkA03G298880 | LXL04_008987 | 99.7% | RBH_high_identity_coverage_synteny | Strict TkA03G299050 | LXL04_008986 | 98.8% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA03G299340 | LXL04_008985 | 95.2% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA03G300300 | LXL04_008984 | 99.7% | RBH_high_identity_coverage_synteny | Strict TkA03G300580 | LXL04_008983 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA03G300720 | LXL04_008982 | 93.2% | multi_source_to_OH1004 | Complex TkA03G300890 | LXL04_008981 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA03G301440 | LXL04_008976 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA03G301450 | LXL04_008975 | 98.4% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA03G301520 | LXL04_008973 | 97.1% | RBH_high_identity_coverage_synteny | Strict TkA03G302230 | LXL04_008971 | 99.7% | RBH_high_identity_coverage_synteny | Strict
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00141 Chr03:73471115-79846582 Chr02:109881891-115440657 mixed 69 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 69 · 当前范围 1–69 · 页码 1/1

TkA03G298770 → LXL04_008989
99.3%
TkA03G298880 → LXL04_008987
99.7%
TkA03G299050 → LXL04_008986
98.8%
TkA03G299340 → LXL04_008985
95.2%
TkA03G300300 → LXL04_008984
99.7%
TkA03G300580 → LXL04_008983
100.0%
TkA03G300720 → LXL04_008982
93.2%
TkA03G300890 → LXL04_008981
100.0%
TkA03G301440 → LXL04_008976
100.0%
TkA03G301450 → LXL04_008975
98.4%
TkA03G301520 → LXL04_008973
97.1%
TkA03G302230 → LXL04_008971
99.7%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA03G298770LXL04_008989JCVI_TKOH_0014199.3100.0 / 100.0Strict
TkA03G298880LXL04_008987JCVI_TKOH_0014199.7100.0 / 99.74Strict
TkA03G299050LXL04_008986JCVI_TKOH_0014198.876.261 / 63.614待复核
TkA03G299340LXL04_008985JCVI_TKOH_0014195.293.333 / 69.136待复核
TkA03G300300LXL04_008984JCVI_TKOH_0014199.7100.0 / 100.0Strict
TkA03G300580LXL04_008983JCVI_TKOH_00141100.0100.0 / 100.0Strict
TkA03G300720LXL04_008982JCVI_TKOH_0014193.2100.0 / 100.0Complex
TkA03G300890LXL04_008981JCVI_TKOH_00141100.093.75 / 91.413待复核
TkA03G301440LXL04_008976JCVI_TKOH_00141100.0100.0 / 100.0Strict
TkA03G301450LXL04_008975JCVI_TKOH_0014198.495.669 / 67.127待复核
TkA03G301520LXL04_008973JCVI_TKOH_0014197.1100.0 / 100.0Strict
TkA03G302230LXL04_008971JCVI_TKOH_0014199.7100.0 / 100.0Strict
TkA03G303080LXL04_008967JCVI_TKOH_0014199.385.89 / 82.353Strict
TkA03G303630LXL04_008966JCVI_TKOH_0014196.284.211 / 15.693待复核
TkA03G303820LXL04_008964JCVI_TKOH_0014192.781.25 / 60.0Complex
TkA03G304470LXL04_008961JCVI_TKOH_0014196.4100.0 / 100.0Strict
TkA03G304660LXL04_008955JCVI_TKOH_0014190.798.714 / 96.308Probable
TkA03G304990LXL04_008954JCVI_TKOH_0014198.488.693 / 63.544Complex
TkA03G305710LXL04_008949JCVI_TKOH_0014198.1100.0 / 100.0Strict
TkA03G305740LXL04_008947JCVI_TKOH_0014196.299.594 / 97.624Strict
TkA03G306170LXL04_008946JCVI_TKOH_0014168.4100.0 / 100.0待复核
TkA03G306980LXL04_008942JCVI_TKOH_0014193.899.222 / 100.0Probable
TkA03G307210LXL04_008940JCVI_TKOH_0014199.6100.0 / 100.0Strict
TkA03G307920LXL04_008936JCVI_TKOH_00141100.0100.0 / 92.652Complex
TkA03G307990LXL04_008935JCVI_TKOH_00141100.0100.0 / 100.0Complex
TkA03G308520LXL04_008934JCVI_TKOH_0014197.6100.0 / 100.0Strict
TkA03G308950LXL04_008931JCVI_TKOH_0014194.6100.0 / 87.179Complex
TkA03G309490LXL04_008929JCVI_TKOH_0014199.7100.0 / 100.0Complex
TkA03G310270LXL04_008927JCVI_TKOH_0014196.9100.0 / 90.521Strict
TkA03G310280LXL04_008926JCVI_TKOH_0014198.9100.0 / 100.0Strict
TkA03G311270LXL04_008918JCVI_TKOH_0014191.1100.0 / 100.0Probable
TkA03G311280LXL04_008917JCVI_TKOH_0014193.384.181 / 23.065Complex
TkA03G312080LXL04_008914JCVI_TKOH_0014172.9100.0 / 100.0待复核
TkA03G312390LXL04_008913JCVI_TKOH_0014197.296.565 / 100.0Strict
TkA03G313680LXL04_008910JCVI_TKOH_00141100.093.0 / 100.0Strict
TkA03G314810LXL04_008903JCVI_TKOH_0014195.7100.0 / 100.0Strict
TkA03G314860LXL04_008901JCVI_TKOH_0014198.0100.0 / 100.0Strict
TkA03G315060LXL04_008895JCVI_TKOH_00141100.0100.0 / 100.0Strict
TkA03G315230LXL04_008894JCVI_TKOH_0014199.0100.0 / 100.0Strict
TkA03G315460LXL04_008893JCVI_TKOH_0014199.2100.0 / 100.0Complex
TkA03G315480LXL04_008891JCVI_TKOH_0014199.3100.0 / 100.0Strict
TkA03G316940LXL04_008886JCVI_TKOH_0014197.888.298 / 49.82待复核
TkA03G317560LXL04_008881JCVI_TKOH_0014192.2100.0 / 100.0Probable
TkA03G317620LXL04_008880JCVI_TKOH_0014198.898.246 / 100.0Strict
TkA03G317730LXL04_008879JCVI_TKOH_0014195.091.935 / 91.255Strict
TkA03G318240LXL04_008875JCVI_TKOH_00141100.0100.0 / 100.0Strict
TkA03G318510LXL04_008871JCVI_TKOH_00141100.0100.0 / 100.0Complex
TkA03G319070LXL04_008865JCVI_TKOH_0014194.288.043 / 23.013Complex
TkA03G319240LXL04_008861JCVI_TKOH_0014199.6100.0 / 100.0Strict
TkA03G319250LXL04_008860JCVI_TKOH_0014199.2100.0 / 100.0Complex
TkA03G319550LXL04_008859JCVI_TKOH_0014198.5100.0 / 100.0Strict
TkA03G319980LXL04_008867JCVI_TKOH_0014198.394.309 / 16.984待复核
TkA03G319990LXL04_008867JCVI_TKOH_0014197.897.425 / 33.236待复核
TkA03G320000LXL04_008867JCVI_TKOH_0014197.2100.0 / 20.937待复核
TkA03G320230LXL04_008865JCVI_TKOH_0014191.390.431 / 25.384Complex
TkA03G320240LXL04_008864JCVI_TKOH_00141100.093.789 / 96.795Strict
TkA03G320330LXL04_008854JCVI_TKOH_00141100.0100.0 / 100.0Complex
TkA03G320550LXL04_008850JCVI_TKOH_00141100.0100.0 / 100.0待复核
TkA03G321330LXL04_008843JCVI_TKOH_0014199.7100.0 / 100.0Strict
TkA03G321380LXL04_008842JCVI_TKOH_0014199.1100.0 / 100.0Strict
TkA03G321550LXL04_008856JCVI_TKOH_0014199.4100.0 / 100.0待复核
TkA03G321610LXL04_008854JCVI_TKOH_00141100.0100.0 / 100.0Complex
TkA03G321900LXL04_008853JCVI_TKOH_00141100.0100.0 / 100.0待复核
TkA03G322630LXL04_008837JCVI_TKOH_00141100.0100.0 / 61.233Complex
TkA03G324360LXL04_008836JCVI_TKOH_0014199.1100.0 / 100.0Strict
TkA03G324370LXL04_008835JCVI_TKOH_0014198.896.718 / 60.0待复核
TkA03G324380LXL04_008834JCVI_TKOH_0014199.2100.0 / 100.0Strict
TkA03G324560LXL04_008832JCVI_TKOH_0014199.799.707 / 28.632待复核
TkA03G325090LXL04_008831JCVI_TKOH_0014197.7100.0 / 100.0Strict